RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 EEF2KMTQ96G04 330 aa12.43□□□□□ -0.42
PBX1-212ENST00000540236 TAF7Q15545 349 aaPredicted RBP12.43□□□□□ -0.42
PBX1-212ENST00000540236 DDX46Q7L014 1031 aaKnown RBP12.43□□□□□ -0.42
PBX1-212ENST00000540236 SMYD4Q8IYR2 804 aaPredicted RBP12.43□□□□□ -0.42
PBX1-212ENST00000540236 CDK5RAP3Q96JB5 506 aa12.43□□□□□ -0.42
PBX1-212ENST00000540236 CFAP74Q9C0B2 1584 aa12.43□□□□□ -0.42
PBX1-212ENST00000540236 PFKFB1P16118 471 aa12.42□□□□□ -0.42
PBX1-212ENST00000540236 IFNAR2P48551 515 aa12.42□□□□□ -0.42
PBX1-212ENST00000540236 HDGFL1Q5TGJ6 251 aa12.42□□□□□ -0.42
PBX1-212ENST00000540236 MRRFQ96E11 262 aaKnown RBP12.42□□□□□ -0.42
PBX1-212ENST00000540236 MRPL44Q9H9J2 332 aaKnown RBP12.42□□□□□ -0.42
PBX1-212ENST00000540236 TRIM10Q9UDY6 481 aa12.42□□□□□ -0.42
PBX1-212ENST00000540236 INTUQ9ULD6 942 aa12.42□□□□□ -0.42
PBX1-212ENST00000540236 SAR1BQ9Y6B6 198 aa12.42□□□□□ -0.42
PBX1-212ENST00000540236 TMEM110-MUSTN1A8MSY1 372 aa12.42□□□□□ -0.42
PBX1-212ENST00000540236 USO1O60763 962 aaKnown RBP12.42□□□□□ -0.42
PBX1-212ENST00000540236 PFKFB2O60825 505 aa12.42□□□□□ -0.42
PBX1-212ENST00000540236 HDGFP51858 240 aaKnown RBP12.42□□□□□ -0.42
PBX1-212ENST00000540236 SOGA3Q5TF21 947 aa12.42□□□□□ -0.42
PBX1-212ENST00000540236 HOOK3Q86VS8 718 aa12.42□□□□□ -0.42
PBX1-212ENST00000540236 SNRNP27Q8WVK2 155 aaKnown RBP12.42□□□□□ -0.42
PBX1-212ENST00000540236 CD2APQ9Y5K6 639 aa12.42□□□□□ -0.42
PBX1-212ENST00000540236 A0A0U1RQJ8 604 aa12.42□□□□□ -0.42
PBX1-212ENST00000540236 ERFP50548 548 aa12.42□□□□□ -0.42
PBX1-212ENST00000540236 PSMD1Q99460 953 aa12.42□□□□□ -0.42
PBX1-212ENST00000540236 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.42□□□□□ -0.42
PBX1-212ENST00000540236 CETN3O15182 167 aa12.42□□□□□ -0.42
PBX1-212ENST00000540236 SGSM2O43147 1006 aa12.42□□□□□ -0.42
PBX1-212ENST00000540236 VAV2P52735 878 aa12.42□□□□□ -0.42
PBX1-212ENST00000540236 RIC3Q7Z5B4 369 aa12.42□□□□□ -0.42
PBX1-212ENST00000540236 ESF1Q9H501 851 aaKnown RBP12.42□□□□□ -0.42
PBX1-212ENST00000540236 OPLAHO14841 1288 aa12.42□□□□□ -0.42
PBX1-212ENST00000540236 IGHMBP2P38935 993 aaKnown RBP12.42□□□□□ -0.42
PBX1-212ENST00000540236 EVI5LQ96CN4 794 aa12.42□□□□□ -0.42
PBX1-212ENST00000540236 CCDC85AQ96PX6 553 aaPredicted RBP12.42□□□□□ -0.42
PBX1-212ENST00000540236 MARCH6O60337 910 aa12.41□□□□□ -0.42
PBX1-212ENST00000540236 PSME1Q06323 249 aa12.41□□□□□ -0.42
PBX1-212ENST00000540236 CCDC25Q86WR0 208 aa12.41□□□□□ -0.42
PBX1-212ENST00000540236 DZIP1Q86YF9 867 aaKnown RBP12.41□□□□□ -0.42
PBX1-212ENST00000540236 CEP120Q8N960 986 aa12.41□□□□□ -0.42
PBX1-212ENST00000540236 MIPOL1Q8TD10 442 aa12.41□□□□□ -0.42
PBX1-212ENST00000540236 EDC3Q96F86 508 aaKnown RBP12.41□□□□□ -0.42
PBX1-212ENST00000540236 SMARCAL1Q9NZC9 954 aa12.41□□□□□ -0.42
PBX1-212ENST00000540236 POLR3AO14802 1390 aaPredicted RBP12.41□□□□□ -0.42
PBX1-212ENST00000540236 KCNB1Q14721 858 aa12.41□□□□□ -0.42
PBX1-212ENST00000540236 RNF168Q8IYW5 571 aaPredicted RBP12.41□□□□□ -0.42
PBX1-212ENST00000540236 BLZF1Q9H2G9 400 aa12.41□□□□□ -0.42
PBX1-212ENST00000540236 HPCAL4Q9UM19 191 aa12.41□□□□□ -0.42
PBX1-212ENST00000540236 RASIP1Q5U651 963 aa12.41□□□□□ -0.42
PBX1-212ENST00000540236 MICU3Q86XE3 530 aa12.41□□□□□ -0.42
PBX1-212ENST00000540236 CNKSR2Q8WXI2 1034 aa12.41□□□□□ -0.42
PBX1-212ENST00000540236 SAMSN1Q9NSI8 373 aaKnown RBP12.41□□□□□ -0.42
PBX1-212ENST00000540236 SLC4A7Q9Y6M7 1214 aa12.41□□□□□ -0.42
PBX1-212ENST00000540236 SEPT7Q16181 437 aaKnown RBP12.41□□□□□ -0.42
PBX1-212ENST00000540236 CYP26C1Q6V0L0 522 aa12.41□□□□□ -0.42
PBX1-212ENST00000540236 C3orf20Q8ND61 904 aa12.41□□□□□ -0.42
PBX1-212ENST00000540236 KCNG4Q8TDN1 519 aa12.41□□□□□ -0.42
PBX1-212ENST00000540236 ZRANB1Q9UGI0 708 aa12.41□□□□□ -0.42
PBX1-212ENST00000540236 NLRP14Q86W24 1093 aa12.41□□□□□ -0.42
PBX1-212ENST00000540236 HVCN1Q96D96 273 aa12.41□□□□□ -0.42
PBX1-212ENST00000540236 LSG1Q9H089 658 aaKnown RBP12.41□□□□□ -0.42
PBX1-212ENST00000540236 PSD3Q9NYI0 1048 aa12.41□□□□□ -0.42
PBX1-212ENST00000540236 KLF18A0A0U1RQI7 1052 aa12.4□□□□□ -0.42
PBX1-212ENST00000540236 TPP2P29144 1249 aaPredicted RBP12.4□□□□□ -0.42
PBX1-212ENST00000540236 ANKRD42Q8N9B4 389 aa12.4□□□□□ -0.42
PBX1-212ENST00000540236 ZNF473Q8WTR7 871 aaKnown RBP12.4□□□□□ -0.42
PBX1-212ENST00000540236 FUCA2Q9BTY2 467 aa12.4□□□□□ -0.42
PBX1-212ENST00000540236 IL25Q9H293 177 aa12.4□□□□□ -0.42
PBX1-212ENST00000540236 POLR2DO15514 142 aaKnown RBP12.4□□□□□ -0.42
PBX1-212ENST00000540236 BEND6Q5SZJ8 279 aaPredicted RBP12.4□□□□□ -0.42
PBX1-212ENST00000540236 RNF10Q8N5U6 811 aaKnown RBP12.4□□□□□ -0.42
PBX1-212ENST00000540236 LAMC3Q9Y6N6 1575 aa12.4□□□□□ -0.42
PBX1-212ENST00000540236 MTIF2P46199 727 aaKnown RBP12.4□□□□□ -0.42
PBX1-212ENST00000540236 IRAK1P51617 712 aa12.4□□□□□ -0.42
PBX1-212ENST00000540236 DEUP1Q05D60 604 aa12.4□□□□□ -0.42
PBX1-212ENST00000540236 ESYT3A0FGR9 886 aa12.4□□□□□ -0.42
PBX1-212ENST00000540236 CACNA2D4Q7Z3S7 1137 aa12.4□□□□□ -0.42
PBX1-212ENST00000540236 SLC26A6Q9BXS9 759 aa12.4□□□□□ -0.42
PBX1-212ENST00000540236 TTF2Q9UNY4 1162 aaKnown RBP12.4□□□□□ -0.42
PBX1-212ENST00000540236 ZRANB2O95218 330 aaKnown RBP eCLIP12.39□□□□□ -0.43
PBX1-212ENST00000540236 KRT32Q14532 448 aa12.39□□□□□ -0.43
PBX1-212ENST00000540236 NOA1Q8NC60 698 aaKnown RBP12.39□□□□□ -0.43
PBX1-212ENST00000540236 ARHGEF2Q92974 986 aaKnown RBP12.39□□□□□ -0.43
PBX1-212ENST00000540236 PRAM1Q96QH2 718 aa12.39□□□□□ -0.43
PBX1-212ENST00000540236 GCC2Q8IWJ2 1684 aa12.39□□□□□ -0.43
PBX1-212ENST00000540236 GNAT1P11488 350 aa12.39□□□□□ -0.43
PBX1-212ENST00000540236 GUCY2DQ02846 1103 aa12.39□□□□□ -0.43
PBX1-212ENST00000540236 LMBR1Q8WVP7 490 aa12.39□□□□□ -0.43
PBX1-212ENST00000540236 ARHGAP45Q92619 1136 aa12.39□□□□□ -0.43
PBX1-212ENST00000540236 MTRQ99707 1265 aa12.39□□□□□ -0.43
PBX1-212ENST00000540236 GJB4Q9NTQ9 266 aa12.39□□□□□ -0.43
PBX1-212ENST00000540236 MEFVO15553 781 aaPredicted RBP12.39□□□□□ -0.43
PBX1-212ENST00000540236 VPS41P49754 854 aa12.39□□□□□ -0.43
PBX1-212ENST00000540236 ATP8B2P98198 1209 aa12.39□□□□□ -0.43
PBX1-212ENST00000540236 NSMCE1Q8WV22 266 aa12.39□□□□□ -0.43
PBX1-212ENST00000540236 KRT86O43790 486 aa12.39□□□□□ -0.43
PBX1-212ENST00000540236 SLC30A9Q6PML9 568 aa12.39□□□□□ -0.43
PBX1-212ENST00000540236 EHBP1Q8NDI1 1231 aa12.39□□□□□ -0.43
PBX1-212ENST00000540236 CREB3O43889 395 aa12.39□□□□□ -0.43
PBX1-212ENST00000540236 CTNNA1P35221 906 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms