RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 PICK1Q9NRD5 415 aa24.86■■□□□ 1.57
LPCAT3-210ENST00000540090 AFG3L2Q9Y4W6 797 aa24.86■■□□□ 1.57
LPCAT3-210ENST00000540090 RANBP2P49792 3224 aaKnown RBP24.86■■□□□ 1.57
LPCAT3-210ENST00000540090 UBTFL1P0CB47 393 aaPredicted RBP24.85■■□□□ 1.57
LPCAT3-210ENST00000540090 IL15P40933 162 aaPredicted RBP24.85■■□□□ 1.57
LPCAT3-210ENST00000540090 SH3BP5LQ7L8J4 393 aa24.85■■□□□ 1.57
LPCAT3-210ENST00000540090 HTATIP2Q9BUP3 242 aa24.85■■□□□ 1.57
LPCAT3-210ENST00000540090 RBM27Q9P2N5 1060 aaKnown RBP24.85■■□□□ 1.57
LPCAT3-210ENST00000540090 GABRQQ9UN88 632 aa24.85■■□□□ 1.57
LPCAT3-210ENST00000540090 GAKO14976 1311 aa24.85■■□□□ 1.57
LPCAT3-210ENST00000540090 ZNF316A6NFI3 1004 aaPredicted RBP24.84■■□□□ 1.57
LPCAT3-210ENST00000540090 SLFN5Q08AF3 891 aa24.84■■□□□ 1.57
LPCAT3-210ENST00000540090 ZGPATQ8N5A5 531 aaKnown RBP24.84■■□□□ 1.57
LPCAT3-210ENST00000540090 SLC45A1Q9Y2W3 748 aa24.84■■□□□ 1.57
LPCAT3-210ENST00000540090 CCDC102BQ68D86 513 aa24.83■■□□□ 1.57
LPCAT3-210ENST00000540090 U2AF1L4Q8WU68 220 aaKnown RBP24.83■■□□□ 1.57
LPCAT3-210ENST00000540090 FAM163AQ96GL9 167 aaPredicted RBP24.83■■□□□ 1.57
LPCAT3-210ENST00000540090 UNC93B1Q9H1C4 597 aa24.82■■□□□ 1.56
LPCAT3-210ENST00000540090 PRO3102Q9H379 93 aa24.82■■□□□ 1.56
LPCAT3-210ENST00000540090 LRRFIP2Q9Y608 721 aaKnown RBP24.82■■□□□ 1.56
LPCAT3-210ENST00000540090 AK9Q5TCS8 1911 aa24.82■■□□□ 1.56
LPCAT3-210ENST00000540090 DDTLA6NHG4 134 aaPredicted RBP24.81■■□□□ 1.56
LPCAT3-210ENST00000540090 ADCY3O60266 1144 aa24.81■■□□□ 1.56
LPCAT3-210ENST00000540090 CTNND1O60716 968 aaKnown RBP24.81■■□□□ 1.56
LPCAT3-210ENST00000540090 SGPL1O95470 568 aa24.81■■□□□ 1.56
LPCAT3-210ENST00000540090 ADORA1P30542 326 aa24.81■■□□□ 1.56
LPCAT3-210ENST00000540090 FLT3LGP49771 235 aa24.81■■□□□ 1.56
LPCAT3-210ENST00000540090 GADL1Q6ZQY3 521 aa24.81■■□□□ 1.56
LPCAT3-210ENST00000540090 ZSCAN29Q8IWY8 852 aaPredicted RBP24.81■■□□□ 1.56
LPCAT3-210ENST00000540090 COPRSQ9NQ92 184 aa24.81■■□□□ 1.56
LPCAT3-210ENST00000540090 SMC4Q9NTJ3 1288 aa24.81■■□□□ 1.56
LPCAT3-210ENST00000540090 PA2G4Q9UQ80 394 aaKnown RBP24.81■■□□□ 1.56
LPCAT3-210ENST00000540090 RFX7Q2KHR2 1363 aa24.8■■□□□ 1.56
LPCAT3-210ENST00000540090 SLF2Q8IX21 1173 aa24.8■■□□□ 1.56
LPCAT3-210ENST00000540090 PXYLP1Q8TE99 480 aa24.8■■□□□ 1.56
LPCAT3-210ENST00000540090 HDAC5Q9UQL6 1122 aa24.8■■□□□ 1.56
LPCAT3-210ENST00000540090 NR2E3Q9Y5X4 410 aa24.8■■□□□ 1.56
LPCAT3-210ENST00000540090 MYH13Q9UKX3 1938 aa24.79■■□□□ 1.56
LPCAT3-210ENST00000540090 FARP2O94887 1054 aaPredicted RBP24.79■■□□□ 1.56
LPCAT3-210ENST00000540090 SLURP2P0DP57 97 aa24.79■■□□□ 1.56
LPCAT3-210ENST00000540090 CAPN2P17655 700 aa24.79■■□□□ 1.56
LPCAT3-210ENST00000540090 IRF5Q13568 498 aa24.79■■□□□ 1.56
LPCAT3-210ENST00000540090 RASGRF1Q13972 1273 aa24.79■■□□□ 1.56
LPCAT3-210ENST00000540090 DZIP1Q86YF9 867 aaKnown RBP24.79■■□□□ 1.56
LPCAT3-210ENST00000540090 DDX4Q9NQI0 724 aaKnown RBP24.79■■□□□ 1.56
LPCAT3-210ENST00000540090 PDS5AQ29RF7 1337 aaKnown RBP24.79■■□□□ 1.56
LPCAT3-210ENST00000540090 TIMM10P62072 90 aa24.78■■□□□ 1.56
LPCAT3-210ENST00000540090 ABCF2Q9UG63 623 aa24.78■■□□□ 1.56
LPCAT3-210ENST00000540090 TNPO2O14787 897 aaKnown RBP24.77■■□□□ 1.56
LPCAT3-210ENST00000540090 TBC1D12O60347 775 aa24.77■■□□□ 1.56
LPCAT3-210ENST00000540090 SPTY2D1Q68D10 685 aaPredicted RBP24.77■■□□□ 1.56
LPCAT3-210ENST00000540090 SMCR8Q8TEV9 937 aaPredicted RBP24.77■■□□□ 1.56
LPCAT3-210ENST00000540090 TRIM75PA6NK02 468 aa24.76■■□□□ 1.55
LPCAT3-210ENST00000540090 ZBTB7BO15156 539 aaPredicted RBP24.76■■□□□ 1.55
LPCAT3-210ENST00000540090 INHAP05111 366 aa24.76■■□□□ 1.55
LPCAT3-210ENST00000540090 ELNP15502 786 aa24.76■■□□□ 1.55
LPCAT3-210ENST00000540090 BTDP43251 543 aa24.76■■□□□ 1.55
LPCAT3-210ENST00000540090 CDCA7LQ96GN5 454 aa24.76■■□□□ 1.55
LPCAT3-210ENST00000540090 NOB1Q9ULX3 412 aaKnown RBP24.76■■□□□ 1.55
LPCAT3-210ENST00000540090 AGTPBP1Q9UPW5 1226 aa24.76■■□□□ 1.55
LPCAT3-210ENST00000540090 GPR75-ASB3A0A0A6YYF3 556 aa24.75■■□□□ 1.55
LPCAT3-210ENST00000540090 NPM3O75607 178 aaKnown RBP24.75■■□□□ 1.55
LPCAT3-210ENST00000540090 RHBDL3P58872 404 aa24.75■■□□□ 1.55
LPCAT3-210ENST00000540090 PICALMQ13492 652 aa24.75■■□□□ 1.55
LPCAT3-210ENST00000540090 TRMT2AQ8IZ69 625 aaKnown RBP24.75■■□□□ 1.55
LPCAT3-210ENST00000540090 DEFB118Q96PH6 123 aa24.74■■□□□ 1.55
LPCAT3-210ENST00000540090 PAK6Q9NQU5 681 aaPredicted RBP24.74■■□□□ 1.55
LPCAT3-210ENST00000540090 MROH7-TTC4A0A0A0MT08 1334 aa24.74■■□□□ 1.55
LPCAT3-210ENST00000540090 TFRCP02786 760 aaKnown RBP24.73■■□□□ 1.55
LPCAT3-210ENST00000540090 CT47B1P0C2W7 299 aaPredicted RBP24.73■■□□□ 1.55
LPCAT3-210ENST00000540090 MECOMQ03112 1051 aa24.73■■□□□ 1.55
LPCAT3-210ENST00000540090 ERICH6Q7L0X2 663 aa24.73■■□□□ 1.55
LPCAT3-210ENST00000540090 CCDC84Q86UT8 332 aaPredicted RBP24.73■■□□□ 1.55
LPCAT3-210ENST00000540090 ANKRD13CQ8N6S4 541 aa24.73■■□□□ 1.55
LPCAT3-210ENST00000540090 COA7Q96BR5 231 aa24.73■■□□□ 1.55
LPCAT3-210ENST00000540090 XAGE2Q96GT9 111 aa24.73■■□□□ 1.55
LPCAT3-210ENST00000540090 API5Q9BZZ5 524 aaKnown RBP24.73■■□□□ 1.55
LPCAT3-210ENST00000540090 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.73■■□□□ 1.55
LPCAT3-210ENST00000540090 A0A1B0GUL7 405 aa24.72■■□□□ 1.55
LPCAT3-210ENST00000540090 TREML2Q5T2D2 321 aa24.72■■□□□ 1.55
LPCAT3-210ENST00000540090 ZNF384Q8TF68 577 aa24.72■■□□□ 1.55
LPCAT3-210ENST00000540090 MEIS3Q99687 375 aa24.72■■□□□ 1.55
LPCAT3-210ENST00000540090 CRISPLD2Q9H0B8 497 aa24.72■■□□□ 1.55
LPCAT3-210ENST00000540090 AKAP2Q9Y2D5 859 aa24.72■■□□□ 1.55
LPCAT3-210ENST00000540090 MYH2Q9UKX2 1941 aa24.72■■□□□ 1.55
LPCAT3-210ENST00000540090 MGAMO43451 1857 aa24.72■■□□□ 1.55
LPCAT3-210ENST00000540090 EVI5O60447 810 aa24.71■■□□□ 1.55
LPCAT3-210ENST00000540090 MVPQ14764 893 aaKnown RBP24.71■■□□□ 1.55
LPCAT3-210ENST00000540090 FAM110CQ1W6H9 321 aa24.71■■□□□ 1.55
LPCAT3-210ENST00000540090 PROCA1Q8NCQ7 364 aaPredicted RBP24.71■■□□□ 1.55
LPCAT3-210ENST00000540090 OSBPL5Q9H0X9 879 aaPredicted RBP24.71■■□□□ 1.55
LPCAT3-210ENST00000540090 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.71■■□□□ 1.55
LPCAT3-210ENST00000540090 PNMA3Q9UL41 463 aa24.71■■□□□ 1.55
LPCAT3-210ENST00000540090 DOCK2Q92608 1830 aa24.7■■□□□ 1.55
LPCAT3-210ENST00000540090 A0A1W2PPC1 479 aa24.7■■□□□ 1.54
LPCAT3-210ENST00000540090 MAP4K4O95819 1239 aaPredicted RBP24.7■■□□□ 1.54
LPCAT3-210ENST00000540090 TFCP2Q12800 502 aa24.7■■□□□ 1.54
LPCAT3-210ENST00000540090 SPP2Q13103 211 aa24.69■■□□□ 1.54
LPCAT3-210ENST00000540090 FAM196BA6NMK8 535 aa24.68■■□□□ 1.54
LPCAT3-210ENST00000540090 LDHCP07864 332 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms