RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 CCDC93Q567U6 631 aa19.86■□□□□ 0.77
COPS3-212ENST00000539941 CHST3Q7LGC8 479 aa19.86■□□□□ 0.77
COPS3-212ENST00000539941 RTKN2Q8IZC4 609 aa19.86■□□□□ 0.77
COPS3-212ENST00000539941 ZNF784Q8NCA9 323 aaPredicted RBP19.86■□□□□ 0.77
COPS3-212ENST00000539941 ZMYND15Q9H091 742 aa19.86■□□□□ 0.77
COPS3-212ENST00000539941 BAZ2AQ9UIF9 1905 aaKnown RBP19.86■□□□□ 0.77
COPS3-212ENST00000539941 B4E1Z4 1266 aa19.85■□□□□ 0.77
COPS3-212ENST00000539941 DPEP1P16444 411 aa19.85■□□□□ 0.77
COPS3-212ENST00000539941 NT5C2P49902 561 aa19.85■□□□□ 0.77
COPS3-212ENST00000539941 KIAA2012Q0VF49 1180 aa19.85■□□□□ 0.77
COPS3-212ENST00000539941 SOGA3Q5TF21 947 aa19.85■□□□□ 0.77
COPS3-212ENST00000539941 ANGEL1Q9UNK9 670 aaKnown RBP19.85■□□□□ 0.77
COPS3-212ENST00000539941 ZDHHC9Q9Y397 364 aa19.85■□□□□ 0.77
COPS3-212ENST00000539941 WDR33Q9C0J8 1336 aaKnown RBP19.85■□□□□ 0.77
COPS3-212ENST00000539941 DDX11L8A8MPP1 907 aa19.84■□□□□ 0.77
COPS3-212ENST00000539941 MINDY4BA8MYZ0 360 aa19.84■□□□□ 0.77
COPS3-212ENST00000539941 FGRP09769 529 aa19.84■□□□□ 0.77
COPS3-212ENST00000539941 KCNA3P22001 575 aa19.84■□□□□ 0.77
COPS3-212ENST00000539941 GJB2P29033 226 aa19.84■□□□□ 0.77
COPS3-212ENST00000539941 PKP1Q13835 747 aa19.84■□□□□ 0.77
COPS3-212ENST00000539941 HSP90AA2PQ14568 343 aaPredicted RBP19.84■□□□□ 0.77
COPS3-212ENST00000539941 CTR9Q6PD62 1173 aa19.84■□□□□ 0.77
COPS3-212ENST00000539941 CYB5R4Q7L1T6 521 aa19.84■□□□□ 0.77
COPS3-212ENST00000539941 SH2B2O14492 632 aaPredicted RBP19.84■□□□□ 0.77
COPS3-212ENST00000539941 SLC3A2P08195 630 aaKnown RBP19.84■□□□□ 0.77
COPS3-212ENST00000539941 PDCP20941 246 aa19.84■□□□□ 0.77
COPS3-212ENST00000539941 PDIA3P30101 505 aaKnown RBP19.84■□□□□ 0.77
COPS3-212ENST00000539941 BTDP43251 543 aa19.84■□□□□ 0.77
COPS3-212ENST00000539941 STK3Q13188 491 aa19.84■□□□□ 0.77
COPS3-212ENST00000539941 STRIP1Q5VSL9 837 aa19.84■□□□□ 0.77
COPS3-212ENST00000539941 PSMD1Q99460 953 aa19.84■□□□□ 0.77
COPS3-212ENST00000539941 ZNF219Q9P2Y4 722 aaPredicted RBP19.84■□□□□ 0.77
COPS3-212ENST00000539941 MKRN1Q9UHC7 482 aaKnown RBP19.84■□□□□ 0.77
COPS3-212ENST00000539941 USP17L12C9JPN9 530 aa19.83■□□□□ 0.76
COPS3-212ENST00000539941 USP17L21D6R901 530 aa19.83■□□□□ 0.76
COPS3-212ENST00000539941 C21orf2O43822 256 aa19.83■□□□□ 0.76
COPS3-212ENST00000539941 PTMSP20962 102 aa19.83■□□□□ 0.76
COPS3-212ENST00000539941 LIFRP42702 1097 aa19.83■□□□□ 0.76
COPS3-212ENST00000539941 SCRN1Q12765 414 aa19.83■□□□□ 0.76
COPS3-212ENST00000539941 SH3RF3Q8TEJ3 882 aaPredicted RBP19.83■□□□□ 0.76
COPS3-212ENST00000539941 TACC3Q9Y6A5 838 aa19.83■□□□□ 0.76
COPS3-212ENST00000539941 ECE2O60344 883 aa19.82■□□□□ 0.76
COPS3-212ENST00000539941 KDM4AO75164 1064 aa19.82■□□□□ 0.76
COPS3-212ENST00000539941 USP5P45974 858 aa19.82■□□□□ 0.76
COPS3-212ENST00000539941 SART3Q15020 963 aaKnown RBP19.82■□□□□ 0.76
COPS3-212ENST00000539941 AMOTL1Q8IY63 956 aa19.82■□□□□ 0.76
COPS3-212ENST00000539941 CERS5Q8N5B7 392 aa19.82■□□□□ 0.76
COPS3-212ENST00000539941 ESR2Q92731 530 aa19.82■□□□□ 0.76
COPS3-212ENST00000539941 FBXW7Q969H0 707 aa19.82■□□□□ 0.76
COPS3-212ENST00000539941 VPS33BQ9H267 617 aa19.82■□□□□ 0.76
COPS3-212ENST00000539941 DBNDD1Q9H9R9 158 aa19.82■□□□□ 0.76
COPS3-212ENST00000539941 ZSWIM5Q9P217 1185 aa19.82■□□□□ 0.76
COPS3-212ENST00000539941 NAV1Q8NEY1 1877 aa19.81■□□□□ 0.76
COPS3-212ENST00000539941 STX6O43752 255 aa19.81■□□□□ 0.76
COPS3-212ENST00000539941 SYT1P21579 422 aa19.81■□□□□ 0.76
COPS3-212ENST00000539941 SGMS1Q86VZ5 419 aa19.81■□□□□ 0.76
COPS3-212ENST00000539941 IGDCC4Q8TDY8 1250 aa19.81■□□□□ 0.76
COPS3-212ENST00000539941 KLF18A0A0U1RQI7 1052 aa19.81■□□□□ 0.76
COPS3-212ENST00000539941 ORC4O43929 436 aa19.81■□□□□ 0.76
COPS3-212ENST00000539941 DHX16O60231 1041 aaKnown RBP19.81■□□□□ 0.76
COPS3-212ENST00000539941 HMGN5P82970 282 aaKnown RBP19.81■□□□□ 0.76
COPS3-212ENST00000539941 SMARCC2Q8TAQ2 1214 aa19.81■□□□□ 0.76
COPS3-212ENST00000539941 MRIQ9BWK5 157 aa19.81■□□□□ 0.76
COPS3-212ENST00000539941 TOMM22Q9NS69 142 aa19.81■□□□□ 0.76
COPS3-212ENST00000539941 MCM9Q9NXL9 1143 aa19.81■□□□□ 0.76
COPS3-212ENST00000539941 PIM2Q9P1W9 311 aa19.81■□□□□ 0.76
COPS3-212ENST00000539941 DAGLAQ9Y4D2 1042 aa19.81■□□□□ 0.76
COPS3-212ENST00000539941 CDK5RAP2Q96SN8 1893 aa19.8■□□□□ 0.76
COPS3-212ENST00000539941 GOLGA6L22H0YM25 854 aa19.8■□□□□ 0.76
COPS3-212ENST00000539941 ZNF646O15015 1829 aaPredicted RBP19.8■□□□□ 0.76
COPS3-212ENST00000539941 BAG4O95429 457 aaKnown RBP19.8■□□□□ 0.76
COPS3-212ENST00000539941 CLCN1P35523 988 aa19.8■□□□□ 0.76
COPS3-212ENST00000539941 AOC3Q16853 763 aa19.8■□□□□ 0.76
COPS3-212ENST00000539941 TMEM67Q5HYA8 995 aa19.8■□□□□ 0.76
COPS3-212ENST00000539941 HHIPL2Q6UWX4 724 aa19.8■□□□□ 0.76
COPS3-212ENST00000539941 TMTC2Q8N394 836 aa19.8■□□□□ 0.76
COPS3-212ENST00000539941 ROBO3Q96MS0 1386 aa19.8■□□□□ 0.76
COPS3-212ENST00000539941 INCENPQ9NQS7 918 aa19.8■□□□□ 0.76
COPS3-212ENST00000539941 GPHNQ9NQX3 736 aaPredicted RBP19.8■□□□□ 0.76
COPS3-212ENST00000539941 TTF2Q9UNY4 1162 aaKnown RBP19.8■□□□□ 0.76
COPS3-212ENST00000539941 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.8■□□□□ 0.76
COPS3-212ENST00000539941 KIF3AQ9Y496 699 aa19.8■□□□□ 0.76
COPS3-212ENST00000539941 USP17L3A6NCW0 530 aa19.79■□□□□ 0.76
COPS3-212ENST00000539941 USP17L4A6NCW7 530 aa19.79■□□□□ 0.76
COPS3-212ENST00000539941 GOLGA8BA8MQT2 603 aa19.79■□□□□ 0.76
COPS3-212ENST00000539941 IFIT3O14879 490 aaKnown RBP19.79■□□□□ 0.76
COPS3-212ENST00000539941 PPIP5K2O43314 1243 aa19.79■□□□□ 0.76
COPS3-212ENST00000539941 RHBDL3P58872 404 aa19.79■□□□□ 0.76
COPS3-212ENST00000539941 HDLBPQ00341 1268 aaKnown RBP19.79■□□□□ 0.76
COPS3-212ENST00000539941 PDE4BQ07343 736 aa19.79■□□□□ 0.76
COPS3-212ENST00000539941 RRP12Q5JTH9 1297 aaKnown RBP19.79■□□□□ 0.76
COPS3-212ENST00000539941 DACT2Q5SW24 774 aa19.79■□□□□ 0.76
COPS3-212ENST00000539941 C12orf60Q5U649 245 aa19.79■□□□□ 0.76
COPS3-212ENST00000539941 USP17L1Q7RTZ2 530 aa19.79■□□□□ 0.76
COPS3-212ENST00000539941 TEX11Q8IYF3 940 aa19.79■□□□□ 0.76
COPS3-212ENST00000539941 NKX2-3Q8TAU0 364 aa19.79■□□□□ 0.76
COPS3-212ENST00000539941 LY9Q9HBG7 655 aa19.79■□□□□ 0.76
COPS3-212ENST00000539941 SCN9AQ15858 1988 aa19.78■□□□□ 0.76
COPS3-212ENST00000539941 CYP2D7A0A087X1C5 515 aa19.78■□□□□ 0.76
COPS3-212ENST00000539941 ERICH2A1L162 156 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms