RNA–Protein interactions for RNA: ENST00000538923.1

MRE11-208, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 5

Gene MRE11, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-208ENST00000538923 CFAP100Q494V2 611 aa11.28□□□□□ -0.6
MRE11-208ENST00000538923 NYAP1Q6ZVC0 841 aa11.28□□□□□ -0.6
MRE11-208ENST00000538923 HELBQ8NG08 1087 aaPredicted RBP11.28□□□□□ -0.6
MRE11-208ENST00000538923 CHMP3Q9Y3E7 222 aa11.28□□□□□ -0.6
MRE11-208ENST00000538923 AKAP11Q9UKA4 1901 aa11.27□□□□□ -0.6
MRE11-208ENST00000538923 F8W031 263 aaPredicted RBP11.27□□□□□ -0.61
MRE11-208ENST00000538923 VAMP4O75379 141 aa11.27□□□□□ -0.61
MRE11-208ENST00000538923 SSTR3P32745 418 aaPredicted RBP11.27□□□□□ -0.61
MRE11-208ENST00000538923 IREB2P48200 963 aaKnown RBP11.27□□□□□ -0.61
MRE11-208ENST00000538923 CCDC57Q2TAC2 916 aa11.27□□□□□ -0.61
MRE11-208ENST00000538923 KMT5BQ4FZB7 885 aa11.27□□□□□ -0.61
MRE11-208ENST00000538923 TAF7LQ5H9L4 462 aa11.27□□□□□ -0.61
MRE11-208ENST00000538923 BEND3Q5T5X7 828 aa11.27□□□□□ -0.61
MRE11-208ENST00000538923 OTUD7BQ6GQQ9 843 aa11.27□□□□□ -0.61
MRE11-208ENST00000538923 LDHAL6AQ6ZMR3 332 aa11.27□□□□□ -0.61
MRE11-208ENST00000538923 WDR63Q8IWG1 891 aa11.27□□□□□ -0.61
MRE11-208ENST00000538923 WNK4Q96J92 1243 aa11.27□□□□□ -0.61
MRE11-208ENST00000538923 PRR14Q9BWN1 585 aa11.27□□□□□ -0.61
MRE11-208ENST00000538923 R3HDMLQ9H3Y0 253 aa11.27□□□□□ -0.61
MRE11-208ENST00000538923 FZD1Q9UP38 647 aa11.27□□□□□ -0.61
MRE11-208ENST00000538923 ZNF646O15015 1829 aaPredicted RBP11.27□□□□□ -0.61
MRE11-208ENST00000538923 POLR2AP24928 1970 aaKnown RBP11.27□□□□□ -0.61
MRE11-208ENST00000538923 SSC5DA1L4H1 1573 aa11.26□□□□□ -0.61
MRE11-208ENST00000538923 CLRN2A0PK11 232 aa11.26□□□□□ -0.61
MRE11-208ENST00000538923 RBM5P52756 815 aaKnown RBP eCLIP11.26□□□□□ -0.61
MRE11-208ENST00000538923 CCDC184Q52MB2 194 aa11.26□□□□□ -0.61
MRE11-208ENST00000538923 LMBR1LQ6UX01 489 aa11.26□□□□□ -0.61
MRE11-208ENST00000538923 CLMNQ96JQ2 1002 aa11.26□□□□□ -0.61
MRE11-208ENST00000538923 PRMT6Q96LA8 375 aaPredicted RBP11.26□□□□□ -0.61
MRE11-208ENST00000538923 VEZTQ9HBM0 779 aa11.26□□□□□ -0.61
MRE11-208ENST00000538923 PCDHAC2Q9Y5I4 1007 aa11.26□□□□□ -0.61
MRE11-208ENST00000538923 F6X3S4 739 aa11.25□□□□□ -0.61
MRE11-208ENST00000538923 GRM8O00222 908 aa11.25□□□□□ -0.61
MRE11-208ENST00000538923 IGF2BP3O00425 579 aaKnown RBP eCLIP11.25□□□□□ -0.61
MRE11-208ENST00000538923 CD46P15529 392 aa11.25□□□□□ -0.61
MRE11-208ENST00000538923 TNFAIP1Q13829 316 aa11.25□□□□□ -0.61
MRE11-208ENST00000538923 INTS3Q68E01 1043 aaKnown RBP11.25□□□□□ -0.61
MRE11-208ENST00000538923 OTOP1Q7RTM1 612 aa11.25□□□□□ -0.61
MRE11-208ENST00000538923 ANKRD13AQ8IZ07 590 aa11.25□□□□□ -0.61
MRE11-208ENST00000538923 ERO1AQ96HE7 468 aa11.25□□□□□ -0.61
MRE11-208ENST00000538923 CNNM1Q9NRU3 951 aa11.25□□□□□ -0.61
MRE11-208ENST00000538923 SERPINA10Q9UK55 444 aa11.25□□□□□ -0.61
MRE11-208ENST00000538923 TRIM17Q9Y577 477 aa11.25□□□□□ -0.61
MRE11-208ENST00000538923 SPEF2Q9C093 1822 aa11.25□□□□□ -0.61
MRE11-208ENST00000538923 PLIN1O60240 522 aa11.24□□□□□ -0.61
MRE11-208ENST00000538923 EXOSC9Q06265 439 aaKnown RBP11.24□□□□□ -0.61
MRE11-208ENST00000538923 RASA3Q14644 834 aa11.24□□□□□ -0.61
MRE11-208ENST00000538923 NBPF12Q5TAG4 269 aaPredicted RBP11.24□□□□□ -0.61
MRE11-208ENST00000538923 C9orf78Q9NZ63 289 aaPredicted RBP11.24□□□□□ -0.61
MRE11-208ENST00000538923 JAG2Q9Y219 1238 aa11.24□□□□□ -0.61
MRE11-208ENST00000538923 MYH3P11055 1940 aa11.24□□□□□ -0.61
MRE11-208ENST00000538923 FAM205AQ6ZU69 1335 aa11.24□□□□□ -0.61
MRE11-208ENST00000538923 USP2O75604 605 aaPredicted RBP11.23□□□□□ -0.61
MRE11-208ENST00000538923 UBE4AQ14139 1066 aa11.23□□□□□ -0.61
MRE11-208ENST00000538923 EPHA10Q5JZY3 1008 aa11.23□□□□□ -0.61
MRE11-208ENST00000538923 MFSD14BQ5SR56 506 aa11.23□□□□□ -0.61
MRE11-208ENST00000538923 GCC1Q96CN9 775 aa11.23□□□□□ -0.61
MRE11-208ENST00000538923 ZNF594Q96JF6 807 aaPredicted RBP11.23□□□□□ -0.61
MRE11-208ENST00000538923 MRS2Q9HD23 443 aa11.23□□□□□ -0.61
MRE11-208ENST00000538923 ALDH1L1O75891 902 aa11.22□□□□□ -0.61
MRE11-208ENST00000538923 MS4A1P11836 297 aa11.22□□□□□ -0.61
MRE11-208ENST00000538923 HIBADHP31937 336 aaKnown RBP11.22□□□□□ -0.61
MRE11-208ENST00000538923 GJA5P36382 358 aa11.22□□□□□ -0.61
MRE11-208ENST00000538923 GCGRP47871 477 aa11.22□□□□□ -0.61
MRE11-208ENST00000538923 TNNI2P48788 182 aa11.22□□□□□ -0.61
MRE11-208ENST00000538923 AOX1Q06278 1338 aa11.22□□□□□ -0.61
MRE11-208ENST00000538923 CRHR2Q13324 411 aa11.22□□□□□ -0.61
MRE11-208ENST00000538923 TDRD7Q8NHU6 1098 aaKnown RBP11.22□□□□□ -0.61
MRE11-208ENST00000538923 OPTNQ96CV9 577 aa11.22□□□□□ -0.61
MRE11-208ENST00000538923 ZNF70Q9UC06 446 aaPredicted RBP11.22□□□□□ -0.61
MRE11-208ENST00000538923 TTF2Q9UNY4 1162 aaKnown RBP11.22□□□□□ -0.61
MRE11-208ENST00000538923 PTPN22Q9Y2R2 807 aa11.22□□□□□ -0.61
MRE11-208ENST00000538923 SALL2Q9Y467 1007 aaPredicted RBP11.22□□□□□ -0.61
MRE11-208ENST00000538923 HTTP42858 3142 aa11.21□□□□□ -0.61
MRE11-208ENST00000538923 GYG1P46976 350 aa11.21□□□□□ -0.61
MRE11-208ENST00000538923 SP3Q02447 781 aa11.21□□□□□ -0.61
MRE11-208ENST00000538923 SLC4A10Q6U841 1118 aa11.21□□□□□ -0.61
MRE11-208ENST00000538923 DZIP1LQ8IYY4 767 aaKnown RBP11.21□□□□□ -0.61
MRE11-208ENST00000538923 CD99L2Q8TCZ2 262 aa11.21□□□□□ -0.61
MRE11-208ENST00000538923 PTPN18Q99952 460 aa11.21□□□□□ -0.61
MRE11-208ENST00000538923 SRCIN1Q9C0H9 1055 aa11.21□□□□□ -0.61
MRE11-208ENST00000538923 KDM4CQ9H3R0 1056 aa11.21□□□□□ -0.61
MRE11-208ENST00000538923 TDRD3Q9H7E2 651 aaKnown RBP11.21□□□□□ -0.61
MRE11-208ENST00000538923 ELP3Q9H9T3 547 aa11.21□□□□□ -0.61
MRE11-208ENST00000538923 EFCC1Q9HA90 598 aa11.21□□□□□ -0.61
MRE11-208ENST00000538923 MROH5Q6ZUA9 1318 aa11.2□□□□□ -0.62
MRE11-208ENST00000538923 ACTN4O43707 911 aaKnown RBP11.2□□□□□ -0.62
MRE11-208ENST00000538923 GTF2A2P52657 109 aa11.2□□□□□ -0.62
MRE11-208ENST00000538923 ARHGEF6Q15052 776 aa11.2□□□□□ -0.62
MRE11-208ENST00000538923 VPS37DQ86XT2 251 aa11.2□□□□□ -0.62
MRE11-208ENST00000538923 ARMC5Q96C12 935 aa11.2□□□□□ -0.62
MRE11-208ENST00000538923 FAM84BQ96KN1 310 aaPredicted RBP11.2□□□□□ -0.62
MRE11-208ENST00000538923 TEPSINQ96N21 525 aa11.2□□□□□ -0.62
MRE11-208ENST00000538923 CSADQ9Y600 493 aa11.2□□□□□ -0.62
MRE11-208ENST00000538923 TCP10L2B9ZVM9 353 aa11.19□□□□□ -0.62
MRE11-208ENST00000538923 CRKP46108 304 aa11.19□□□□□ -0.62
MRE11-208ENST00000538923 VGLL4Q14135 290 aa11.19□□□□□ -0.62
MRE11-208ENST00000538923 CAVIN4Q5BKX8 364 aa11.19□□□□□ -0.62
MRE11-208ENST00000538923 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.19□□□□□ -0.62
MRE11-208ENST00000538923 TBC1D22AQ8WUA7 517 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms