RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 MFSD6Q6ZSS7 791 aa10.37□□□□□ -0.75
GGA3-202ENST00000538886 CDC37L1Q7L3B6 337 aa10.37□□□□□ -0.75
GGA3-202ENST00000538886 WRNIP1Q96S55 665 aa10.37□□□□□ -0.75
GGA3-202ENST00000538886 A0A0D9SFI3 127 aa10.36□□□□□ -0.75
GGA3-202ENST00000538886 KLRG2A4D1S0 409 aaPredicted RBP10.36□□□□□ -0.75
GGA3-202ENST00000538886 TRIM75PA6NK02 468 aa10.36□□□□□ -0.75
GGA3-202ENST00000538886 SART3Q15020 963 aaKnown RBP10.36□□□□□ -0.75
GGA3-202ENST00000538886 MOB2Q70IA6 237 aa10.36□□□□□ -0.75
GGA3-202ENST00000538886 DYNLL2Q96FJ2 89 aa10.36□□□□□ -0.75
GGA3-202ENST00000538886 CTNNA3Q9UI47 895 aa10.36□□□□□ -0.75
GGA3-202ENST00000538886 DNTTIP2Q5QJE6 756 aaKnown RBP10.36□□□□□ -0.75
GGA3-202ENST00000538886 AGBL3Q8NEM8 1001 aa10.36□□□□□ -0.75
GGA3-202ENST00000538886 C7orf43Q8WVR3 580 aa10.36□□□□□ -0.75
GGA3-202ENST00000538886 MSNP26038 577 aaKnown RBP10.36□□□□□ -0.75
GGA3-202ENST00000538886 BECN1Q14457 450 aa10.36□□□□□ -0.75
GGA3-202ENST00000538886 OSBP2Q969R2 916 aa10.36□□□□□ -0.75
GGA3-202ENST00000538886 ZNF287Q9HBT7 754 aa10.36□□□□□ -0.75
GGA3-202ENST00000538886 MED23Q9ULK4 1368 aa10.35□□□□□ -0.75
GGA3-202ENST00000538886 CPLX1O14810 134 aa10.35□□□□□ -0.75
GGA3-202ENST00000538886 ZNF157P51786 506 aaPredicted RBP10.35□□□□□ -0.75
GGA3-202ENST00000538886 SPICE1Q8N0Z3 855 aa10.35□□□□□ -0.75
GGA3-202ENST00000538886 ZNF784Q8NCA9 323 aaPredicted RBP10.35□□□□□ -0.75
GGA3-202ENST00000538886 JAKMIP1Q96N16 626 aaKnown RBP10.35□□□□□ -0.75
GGA3-202ENST00000538886 CYP2D6P10635 497 aa10.35□□□□□ -0.75
GGA3-202ENST00000538886 OTUD5Q96G74 571 aa10.35□□□□□ -0.75
GGA3-202ENST00000538886 TAF1DQ9H5J8 278 aaPredicted RBP10.35□□□□□ -0.75
GGA3-202ENST00000538886 ZNF70Q9UC06 446 aaPredicted RBP10.35□□□□□ -0.75
GGA3-202ENST00000538886 U3KPZ7 1027 aaPredicted RBP10.35□□□□□ -0.75
GGA3-202ENST00000538886 C10orf71Q711Q0 1435 aa10.35□□□□□ -0.75
GGA3-202ENST00000538886 FGFR2P21802 821 aa10.35□□□□□ -0.75
GGA3-202ENST00000538886 AKAP17AQ02040 695 aaKnown RBP10.35□□□□□ -0.75
GGA3-202ENST00000538886 GNL2Q13823 731 aaKnown RBP10.35□□□□□ -0.75
GGA3-202ENST00000538886 ARMC9Q7Z3E5 817 aa10.35□□□□□ -0.75
GGA3-202ENST00000538886 SLC44A5Q8NCS7 719 aa10.35□□□□□ -0.75
GGA3-202ENST00000538886 NSUN4Q96CB9 384 aaKnown RBP10.35□□□□□ -0.75
GGA3-202ENST00000538886 DTNBO60941 627 aa10.34□□□□□ -0.75
GGA3-202ENST00000538886 NBPF12Q5TAG4 269 aaPredicted RBP10.34□□□□□ -0.75
GGA3-202ENST00000538886 CDC42EP5Q6NZY7 148 aa10.34□□□□□ -0.75
GGA3-202ENST00000538886 GADL1Q6ZQY3 521 aa10.34□□□□□ -0.75
GGA3-202ENST00000538886 IFIT3O14879 490 aaKnown RBP10.34□□□□□ -0.75
GGA3-202ENST00000538886 RPS12P25398 132 aaKnown RBP10.34□□□□□ -0.75
GGA3-202ENST00000538886 FOXD4L5Q5VV16 416 aaPredicted RBP10.34□□□□□ -0.75
GGA3-202ENST00000538886 DCAF15Q66K64 600 aa10.34□□□□□ -0.75
GGA3-202ENST00000538886 IQCA1Q86XH1 822 aa10.34□□□□□ -0.75
GGA3-202ENST00000538886 SMCR8Q8TEV9 937 aaPredicted RBP10.34□□□□□ -0.75
GGA3-202ENST00000538886 FOXD4L4Q8WXT5 416 aaPredicted RBP10.34□□□□□ -0.75
GGA3-202ENST00000538886 NEK4P51957 841 aa10.34□□□□□ -0.75
GGA3-202ENST00000538886 VGLL2Q8N8G2 317 aa10.34□□□□□ -0.75
GGA3-202ENST00000538886 ELP3Q9H9T3 547 aa10.34□□□□□ -0.75
GGA3-202ENST00000538886 INCENPQ9NQS7 918 aa10.34□□□□□ -0.75
GGA3-202ENST00000538886 GSPT1P15170 499 aaKnown RBP10.33□□□□□ -0.76
GGA3-202ENST00000538886 FOXD4L6Q3SYB3 417 aaPredicted RBP10.33□□□□□ -0.76
GGA3-202ENST00000538886 FOXD4L3Q6VB84 417 aaPredicted RBP10.33□□□□□ -0.76
GGA3-202ENST00000538886 R3HCC1Q9Y3T6 440 aaKnown RBP10.33□□□□□ -0.76
GGA3-202ENST00000538886 VIL1P09327 827 aaKnown RBP10.33□□□□□ -0.76
GGA3-202ENST00000538886 CHMLP26374 656 aa10.33□□□□□ -0.76
GGA3-202ENST00000538886 ADD2P35612 726 aa10.33□□□□□ -0.76
GGA3-202ENST00000538886 CERKLQ49MI3 558 aaPredicted RBP10.33□□□□□ -0.76
GGA3-202ENST00000538886 M0R2C6 588 aa10.33□□□□□ -0.76
GGA3-202ENST00000538886 IREB2P48200 963 aaKnown RBP10.33□□□□□ -0.76
GGA3-202ENST00000538886 HOMER1Q86YM7 354 aa10.33□□□□□ -0.76
GGA3-202ENST00000538886 ZKSCAN4Q969J2 545 aaPredicted RBP10.33□□□□□ -0.76
GGA3-202ENST00000538886 RBM8AQ9Y5S9 174 aaKnown RBP10.33□□□□□ -0.76
GGA3-202ENST00000538886 ZHX2Q9Y6X8 837 aa10.33□□□□□ -0.76
GGA3-202ENST00000538886 CCDC171Q6TFL3 1326 aa10.32□□□□□ -0.76
GGA3-202ENST00000538886 SPDYE2BA6NHP3 402 aa10.32□□□□□ -0.76
GGA3-202ENST00000538886 CCDC69A6NI79 296 aa10.32□□□□□ -0.76
GGA3-202ENST00000538886 SPDYE6P0CI01 402 aa10.32□□□□□ -0.76
GGA3-202ENST00000538886 XRCC6P12956 609 aaKnown RBP eCLIP10.32□□□□□ -0.761e-6■■■■□ 19.8
GGA3-202ENST00000538886 IL1R1P14778 569 aa10.32□□□□□ -0.76
GGA3-202ENST00000538886 CPA1P15085 419 aa10.32□□□□□ -0.76
GGA3-202ENST00000538886 RXRAP19793 462 aa10.32□□□□□ -0.76
GGA3-202ENST00000538886 CHMP4BP1P59074 171 aa10.32□□□□□ -0.76
GGA3-202ENST00000538886 ZNF589Q86UQ0 364 aaPredicted RBP10.32□□□□□ -0.76
GGA3-202ENST00000538886 TANGO6Q9C0B7 1094 aa10.32□□□□□ -0.76
GGA3-202ENST00000538886 SERPINB13Q9UIV8 391 aa10.32□□□□□ -0.76
GGA3-202ENST00000538886 MROH7-TTC4A0A0A0MT08 1334 aa10.32□□□□□ -0.76
GGA3-202ENST00000538886 B4E1Z4 1266 aa10.32□□□□□ -0.76
GGA3-202ENST00000538886 CASTP20810 708 aaKnown RBP10.32□□□□□ -0.76
GGA3-202ENST00000538886 ARID4AP29374 1257 aaPredicted RBP10.32□□□□□ -0.76
GGA3-202ENST00000538886 BMP2KLQ5H9B9 411 aa10.32□□□□□ -0.76
GGA3-202ENST00000538886 IFNL3Q8IZI9 196 aa10.32□□□□□ -0.76
GGA3-202ENST00000538886 PI4K2BQ8TCG2 481 aa10.32□□□□□ -0.76
GGA3-202ENST00000538886 PAGR1Q9BTK6 254 aa10.32□□□□□ -0.76
GGA3-202ENST00000538886 C5P01031 1676 aa10.32□□□□□ -0.76
GGA3-202ENST00000538886 APOBEC3FQ8IUX4 373 aaKnown RBP10.31□□□□□ -0.76
GGA3-202ENST00000538886 CPXCR1Q8N123 301 aa10.31□□□□□ -0.76
GGA3-202ENST00000538886 FZD9O00144 591 aa10.31□□□□□ -0.76
GGA3-202ENST00000538886 TFAP4Q01664 338 aa10.31□□□□□ -0.76
GGA3-202ENST00000538886 BLOC1S2Q6QNY1 142 aa10.31□□□□□ -0.76
GGA3-202ENST00000538886 DPF2Q92785 391 aa10.31□□□□□ -0.76
GGA3-202ENST00000538886 BIN2Q9UBW5 565 aaPredicted RBP10.31□□□□□ -0.76
GGA3-202ENST00000538886 CLIP2Q9UDT6 1046 aa10.31□□□□□ -0.76
GGA3-202ENST00000538886 FGAP02671 866 aa10.31□□□□□ -0.76
GGA3-202ENST00000538886 GNAT2P19087 354 aa10.31□□□□□ -0.76
GGA3-202ENST00000538886 CHADLQ6NUI6 762 aa10.31□□□□□ -0.76
GGA3-202ENST00000538886 MICU3Q86XE3 530 aa10.31□□□□□ -0.76
GGA3-202ENST00000538886 C22orf23Q9BZE7 217 aa10.31□□□□□ -0.76
GGA3-202ENST00000538886 ZBTB22O15209 634 aa10.3□□□□□ -0.76
GGA3-202ENST00000538886 GH2P01242 217 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms