RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 PRKG1Q13976 671 aa16.7■□□□□ 0.26
CD9-208ENST00000538834 METTL16Q86W50 562 aaKnown RBP16.7■□□□□ 0.26
CD9-208ENST00000538834 HOOK2Q96ED9 719 aa16.7■□□□□ 0.26
CD9-208ENST00000538834 RIOK1Q9BRS2 568 aaKnown RBP16.7■□□□□ 0.26
CD9-208ENST00000538834 ECHDC1Q9NTX5 307 aa16.7■□□□□ 0.26
CD9-208ENST00000538834 PHF20L1A8MW92 1017 aa16.69■□□□□ 0.26
CD9-208ENST00000538834 TBC1D12O60347 775 aa16.69■□□□□ 0.26
CD9-208ENST00000538834 IGHDP01880 384 aa16.69■□□□□ 0.26
CD9-208ENST00000538834 ZBTB48P10074 688 aaPredicted RBP16.69■□□□□ 0.26
CD9-208ENST00000538834 MAP3K9P80192 1104 aa16.69■□□□□ 0.26
CD9-208ENST00000538834 TCP10Q12799 353 aa16.69■□□□□ 0.26
CD9-208ENST00000538834 SH3RF3Q8TEJ3 882 aaPredicted RBP16.69■□□□□ 0.26
CD9-208ENST00000538834 EDC3Q96F86 508 aaKnown RBP16.69■□□□□ 0.26
CD9-208ENST00000538834 BOLA2Q9H3K6 86 aa16.69■□□□□ 0.26
CD9-208ENST00000538834 MYH8P13535 1937 aa16.68■□□□□ 0.26
CD9-208ENST00000538834 TESPA1A2RU30 521 aaPredicted RBP16.68■□□□□ 0.26
CD9-208ENST00000538834 IDH1O75874 414 aaKnown RBP16.68■□□□□ 0.26
CD9-208ENST00000538834 PLCG2P16885 1265 aa16.68■□□□□ 0.26
CD9-208ENST00000538834 MAP3K12Q12852 859 aa16.68■□□□□ 0.26
CD9-208ENST00000538834 TTLL12Q14166 644 aaPredicted RBP16.68■□□□□ 0.26
CD9-208ENST00000538834 PAXIP1Q6ZW49 1069 aaPredicted RBP16.68■□□□□ 0.26
CD9-208ENST00000538834 PI4K2BQ8TCG2 481 aa16.68■□□□□ 0.26
CD9-208ENST00000538834 WNK4Q96J92 1243 aa16.68■□□□□ 0.26
CD9-208ENST00000538834 OSBPL5Q9H0X9 879 aaPredicted RBP16.68■□□□□ 0.26
CD9-208ENST00000538834 PAG1Q9NWQ8 432 aa16.68■□□□□ 0.26
CD9-208ENST00000538834 AATFQ9NY61 560 aaKnown RBP eCLIP16.68■□□□□ 0.26
CD9-208ENST00000538834 TTC41PQ6P2S7 1318 aa16.68■□□□□ 0.26
CD9-208ENST00000538834 GOLIM4O00461 696 aa16.67■□□□□ 0.26
CD9-208ENST00000538834 BAG3O95817 575 aa16.67■□□□□ 0.26
CD9-208ENST00000538834 HSPA8P11142 646 aaKnown RBP16.67■□□□□ 0.26
CD9-208ENST00000538834 PDE6AP16499 860 aa16.67■□□□□ 0.26
CD9-208ENST00000538834 CYP7A1P22680 504 aa16.67■□□□□ 0.26
CD9-208ENST00000538834 VGLL4Q14135 290 aa16.67■□□□□ 0.26
CD9-208ENST00000538834 NOL9Q5SY16 702 aaKnown RBP16.67■□□□□ 0.26
CD9-208ENST00000538834 DCAF15Q66K64 600 aa16.67■□□□□ 0.26
CD9-208ENST00000538834 CERS3Q8IU89 383 aa16.67■□□□□ 0.26
CD9-208ENST00000538834 MAGEB6Q8N7X4 407 aa16.67■□□□□ 0.26
CD9-208ENST00000538834 OTUD7AQ8TE49 926 aaPredicted RBP16.67■□□□□ 0.26
CD9-208ENST00000538834 SLC10A4Q96EP9 437 aa16.67■□□□□ 0.26
CD9-208ENST00000538834 CFHR5Q9BXR6 569 aa16.67■□□□□ 0.26
CD9-208ENST00000538834 ZNF341Q9BYN7 854 aa16.67■□□□□ 0.26
CD9-208ENST00000538834 STAP2Q9UGK3 403 aa16.67■□□□□ 0.26
CD9-208ENST00000538834 SNCAIPQ9Y6H5 919 aa16.67■□□□□ 0.26
CD9-208ENST00000538834 CA12O43570 354 aa16.66■□□□□ 0.26
CD9-208ENST00000538834 ADD2P35612 726 aa16.66■□□□□ 0.26
CD9-208ENST00000538834 DYNLL1P63167 89 aaKnown RBP16.66■□□□□ 0.26
CD9-208ENST00000538834 MS4A4AQ96JQ5 239 aa16.66■□□□□ 0.26
CD9-208ENST00000538834 PRDM10Q9NQV6 1147 aa16.66■□□□□ 0.26
CD9-208ENST00000538834 SAGE1Q9NXZ1 904 aa16.66■□□□□ 0.26
CD9-208ENST00000538834 SPDYE5A6NIY4 337 aa16.65■□□□□ 0.26
CD9-208ENST00000538834 GRM1Q13255 1194 aa16.65■□□□□ 0.26
CD9-208ENST00000538834 SLC9C2Q5TAH2 1124 aa16.65■□□□□ 0.26
CD9-208ENST00000538834 MIGA2Q7L4E1 593 aa16.65■□□□□ 0.26
CD9-208ENST00000538834 TEX11Q8IYF3 940 aa16.65■□□□□ 0.26
CD9-208ENST00000538834 DNAJC2Q99543 621 aaKnown RBP16.65■□□□□ 0.26
CD9-208ENST00000538834 RWDD1Q9H446 243 aaPredicted RBP16.65■□□□□ 0.26
CD9-208ENST00000538834 FLT1P17948 1338 aa16.65■□□□□ 0.26
CD9-208ENST00000538834 SLURP2P0DP57 97 aa16.64■□□□□ 0.25
CD9-208ENST00000538834 INPP5BP32019 993 aa16.64■□□□□ 0.25
CD9-208ENST00000538834 CTCFP49711 727 aaPredicted RBP16.64■□□□□ 0.25
CD9-208ENST00000538834 INHBEP58166 350 aa16.64■□□□□ 0.25
CD9-208ENST00000538834 UBE3CQ15386 1083 aa16.64■□□□□ 0.25
CD9-208ENST00000538834 ZKSCAN4Q969J2 545 aaPredicted RBP16.64■□□□□ 0.25
CD9-208ENST00000538834 WRNIP1Q96S55 665 aa16.64■□□□□ 0.25
CD9-208ENST00000538834 DHX36Q9H2U1 1008 aaKnown RBP16.64■□□□□ 0.25
CD9-208ENST00000538834 RNF186Q9NXI6 227 aa16.64■□□□□ 0.25
CD9-208ENST00000538834 ZNF532Q9HCE3 1301 aa16.64■□□□□ 0.25
CD9-208ENST00000538834 PICALMQ13492 652 aa16.63■□□□□ 0.25
CD9-208ENST00000538834 ANKRD45Q5TZF3 282 aa16.63■□□□□ 0.25
CD9-208ENST00000538834 KBTBD3Q8NAB2 608 aa16.63■□□□□ 0.25
CD9-208ENST00000538834 TGFBRAP1Q8WUH2 860 aa16.63■□□□□ 0.25
CD9-208ENST00000538834 CNKSR2Q8WXI2 1034 aa16.63■□□□□ 0.25
CD9-208ENST00000538834 ELP3Q9H9T3 547 aa16.63■□□□□ 0.25
CD9-208ENST00000538834 LOC285556D6RIA3 1793 aa16.62■□□□□ 0.25
CD9-208ENST00000538834 MANSC4A6NHS7 340 aaPredicted RBP16.62■□□□□ 0.25
CD9-208ENST00000538834 CHGBP05060 677 aa16.62■□□□□ 0.25
CD9-208ENST00000538834 MX1P20591 662 aa16.62■□□□□ 0.25
CD9-208ENST00000538834 NUCB1Q02818 461 aa16.62■□□□□ 0.25
CD9-208ENST00000538834 SLFNL1Q499Z3 407 aa16.62■□□□□ 0.25
CD9-208ENST00000538834 NOM1Q5C9Z4 860 aaKnown RBP16.62■□□□□ 0.25
CD9-208ENST00000538834 TSHZ3Q63HK5 1081 aa16.62■□□□□ 0.25
CD9-208ENST00000538834 ERO1BQ86YB8 467 aa16.62■□□□□ 0.25
CD9-208ENST00000538834 MIGA1Q8NAN2 632 aa16.62■□□□□ 0.25
CD9-208ENST00000538834 OPTNQ96CV9 577 aa16.62■□□□□ 0.25
CD9-208ENST00000538834 PTPN18Q99952 460 aa16.62■□□□□ 0.25
CD9-208ENST00000538834 NOL10Q9BSC4 688 aaKnown RBP16.62■□□□□ 0.25
CD9-208ENST00000538834 DNAJC18Q9H819 358 aa16.62■□□□□ 0.25
CD9-208ENST00000538834 PI4KBQ9UBF8 816 aa16.62■□□□□ 0.25
CD9-208ENST00000538834 KCNH4Q9UQ05 1017 aa16.62■□□□□ 0.25
CD9-208ENST00000538834 GLRX3O76003 335 aaKnown RBP16.61■□□□□ 0.25
CD9-208ENST00000538834 PDE1AP54750 535 aa16.61■□□□□ 0.25
CD9-208ENST00000538834 PPATQ06203 517 aa16.61■□□□□ 0.25
CD9-208ENST00000538834 PPIL2Q13356 520 aa16.61■□□□□ 0.25
CD9-208ENST00000538834 RRP1BQ14684 758 aaKnown RBP16.61■□□□□ 0.25
CD9-208ENST00000538834 FOXP4Q8IVH2 680 aaPredicted RBP16.61■□□□□ 0.25
CD9-208ENST00000538834 GPATCH3Q96I76 525 aa16.61■□□□□ 0.25
CD9-208ENST00000538834 OSBPL3Q9H4L5 887 aa16.61■□□□□ 0.25
CD9-208ENST00000538834 HERC5Q9UII4 1024 aaKnown RBP16.61■□□□□ 0.25
CD9-208ENST00000538834 CSADQ9Y600 493 aa16.61■□□□□ 0.25
CD9-208ENST00000538834 MAGEB6P1A0A0J9YX57 407 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms