RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 FASTKD5Q7L8L6 764 aaKnown RBP4.24□□□□□ -1.73
PTPN22-211ENST00000538253 ANKRD13AQ8IZ07 590 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 PUS3Q9BZE2 481 aaKnown RBP4.24□□□□□ -1.73
PTPN22-211ENST00000538253 EHD4Q9H223 541 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 C1orf115Q9H7X2 142 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 RRAGCQ9HB90 399 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 VEZTQ9HBM0 779 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 USP40Q9NVE5 1235 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 HMG20BQ9P0W2 317 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 PI4KBQ9UBF8 816 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 PA2G4Q9UQ80 394 aaKnown RBP4.24□□□□□ -1.73
PTPN22-211ENST00000538253 TNRC6CQ9HCJ0 1690 aaKnown RBP4.24□□□□□ -1.73
PTPN22-211ENST00000538253 ZMYM6O95789 1325 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 ERICH2A1L162 156 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 PSMA5P28066 241 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 BCAMP50895 628 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 MAP2K1Q02750 393 aaPredicted RBP4.24□□□□□ -1.73
PTPN22-211ENST00000538253 KIAA0825Q8IV33 1275 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 TMTC2Q8N394 836 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 EXOC6Q8TAG9 804 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 GMLQ99445 158 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 MPHOSPH6Q99547 160 aaKnown RBP4.24□□□□□ -1.73
PTPN22-211ENST00000538253 DBNDD2Q9BQY9 259 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 GBA2Q9HCG7 927 aaPredicted RBP4.24□□□□□ -1.73
PTPN22-211ENST00000538253 CREBZFQ9NS37 354 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 DDNO94850 711 aaPredicted RBP4.24□□□□□ -1.73
PTPN22-211ENST00000538253 MAP2K2P36507 400 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 PHKA1P46020 1223 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 PDE1AP54750 535 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 SCARF1Q14162 830 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 KIF22Q14807 665 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 ALX1Q15699 326 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 IMMTQ16891 758 aaKnown RBP4.24□□□□□ -1.73
PTPN22-211ENST00000538253 BMP2KLQ5H9B9 411 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 SLC9C2Q5TAH2 1124 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 FOXD4L5Q5VV16 416 aaPredicted RBP4.24□□□□□ -1.73
PTPN22-211ENST00000538253 SYNE3Q6ZMZ3 975 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 FOXD4L4Q8WXT5 416 aaPredicted RBP4.24□□□□□ -1.73
PTPN22-211ENST00000538253 CCDC8Q9H0W5 538 aaPredicted RBP4.24□□□□□ -1.73
PTPN22-211ENST00000538253 NAPBQ9H115 298 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 ARHGEF10LQ9HCE6 1279 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 TMOD4Q9NZQ9 345 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 ZNF70Q9UC06 446 aaPredicted RBP4.24□□□□□ -1.73
PTPN22-211ENST00000538253 WDR90Q96KV7 1748 aa4.23□□□□□ -1.73
PTPN22-211ENST00000538253 C19orf81C9J6K1 198 aa4.23□□□□□ -1.73
PTPN22-211ENST00000538253 CXCL11O14625 94 aa4.23□□□□□ -1.73
PTPN22-211ENST00000538253 ASNSP08243 561 aa4.23□□□□□ -1.73
PTPN22-211ENST00000538253 ZBTB48P10074 688 aaPredicted RBP4.23□□□□□ -1.73
PTPN22-211ENST00000538253 BTDP43251 543 aa4.23□□□□□ -1.73
PTPN22-211ENST00000538253 TDO2P48775 406 aa4.23□□□□□ -1.73
PTPN22-211ENST00000538253 PRMT2P55345 433 aa4.23□□□□□ -1.73
PTPN22-211ENST00000538253 TIMM10P62072 90 aa4.23□□□□□ -1.73
PTPN22-211ENST00000538253 MAP3K9P80192 1104 aa4.23□□□□□ -1.73
PTPN22-211ENST00000538253 RASGRF1Q13972 1273 aa4.23□□□□□ -1.73
PTPN22-211ENST00000538253 MCMDC2Q4G0Z9 681 aa4.23□□□□□ -1.73
PTPN22-211ENST00000538253 CPLX2Q6PUV4 134 aaKnown RBP4.23□□□□□ -1.73
PTPN22-211ENST00000538253 ZNF444Q8N0Y2 327 aaPredicted RBP4.23□□□□□ -1.73
PTPN22-211ENST00000538253 ZNF784Q8NCA9 323 aaPredicted RBP4.23□□□□□ -1.73
PTPN22-211ENST00000538253 EAF2Q96CJ1 260 aaPredicted RBP4.23□□□□□ -1.73
PTPN22-211ENST00000538253 SLC10A4Q96EP9 437 aa4.23□□□□□ -1.73
PTPN22-211ENST00000538253 KRT23Q9C075 422 aa4.23□□□□□ -1.73
PTPN22-211ENST00000538253 KIF3AQ9Y496 699 aa4.23□□□□□ -1.73
PTPN22-211ENST00000538253 SPEF2Q9C093 1822 aa4.23□□□□□ -1.73
PTPN22-211ENST00000538253 SCN4AP35499 1836 aa4.23□□□□□ -1.73
PTPN22-211ENST00000538253 APBB1O00213 710 aa4.23□□□□□ -1.73
PTPN22-211ENST00000538253 GOLIM4O00461 696 aa4.23□□□□□ -1.73
PTPN22-211ENST00000538253 HOXD10P28358 340 aa4.23□□□□□ -1.73
PTPN22-211ENST00000538253 PPP2R5BQ15173 497 aa4.23□□□□□ -1.73
PTPN22-211ENST00000538253 SBK1Q52WX2 424 aa4.23□□□□□ -1.73
PTPN22-211ENST00000538253 AXDND1Q5T1B0 1012 aaPredicted RBP4.23□□□□□ -1.73
PTPN22-211ENST00000538253 RALYLQ86SE5 291 aaKnown RBP4.23□□□□□ -1.73
PTPN22-211ENST00000538253 IL1RAPL2Q9NP60 686 aa4.23□□□□□ -1.73
PTPN22-211ENST00000538253 SLC5A4Q9NY91 659 aa4.23□□□□□ -1.73
PTPN22-211ENST00000538253 GGA3Q9NZ52 723 aa4.23□□□□□ -1.73
PTPN22-211ENST00000538253 RBM27Q9P2N5 1060 aaKnown RBP4.23□□□□□ -1.73
PTPN22-211ENST00000538253 DBNLQ9UJU6 430 aaKnown RBP4.23□□□□□ -1.73
PTPN22-211ENST00000538253 CTNND1O60716 968 aaKnown RBP4.23□□□□□ -1.73
PTPN22-211ENST00000538253 PDE6AP16499 860 aa4.23□□□□□ -1.73
PTPN22-211ENST00000538253 HSPA6P17066 643 aa4.23□□□□□ -1.73
PTPN22-211ENST00000538253 OSBPP22059 807 aa4.23□□□□□ -1.73
PTPN22-211ENST00000538253 ADD2P35612 726 aa4.23□□□□□ -1.73
PTPN22-211ENST00000538253 RBM25P49756 843 aaKnown RBP4.23□□□□□ -1.73
PTPN22-211ENST00000538253 GNAQP50148 359 aa4.23□□□□□ -1.73
PTPN22-211ENST00000538253 GTF2A2P52657 109 aa4.23□□□□□ -1.73
PTPN22-211ENST00000538253 RBM26Q5T8P6 1007 aaKnown RBP4.23□□□□□ -1.73
PTPN22-211ENST00000538253 DSCC1Q9BVC3 393 aa4.23□□□□□ -1.73
PTPN22-211ENST00000538253 BOLA2Q9H3K6 86 aa4.23□□□□□ -1.73
PTPN22-211ENST00000538253 ZHX1Q9UKY1 873 aaPredicted RBP4.23□□□□□ -1.73
PTPN22-211ENST00000538253 ABT1Q9ULW3 272 aaKnown RBP4.23□□□□□ -1.73
PTPN22-211ENST00000538253 ANKRD31Q8N7Z5 1873 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 ZNF541Q9H0D2 1346 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 GNRH1P01148 92 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 CETPP11597 493 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 CCNA1P78396 465 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 MAP3K11Q16584 847 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 TBC1D10BQ4KMP7 808 aaPredicted RBP4.22□□□□□ -1.73
PTPN22-211ENST00000538253 NOL9Q5SY16 702 aaKnown RBP4.22□□□□□ -1.73
PTPN22-211ENST00000538253 MCTP2Q6DN12 878 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 IQCA1Q86XH1 822 aa4.22□□□□□ -1.73
PTPN22-211ENST00000538253 ERO1BQ86YB8 467 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms