RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 ZRSR1Q15695 479 aaKnown RBP7.7□□□□□ -1.18
USP28-206ENST00000538224 MYSM1Q5VVJ2 828 aa7.7□□□□□ -1.18
USP28-206ENST00000538224 TBC1D9BQ66K14 1250 aa7.7□□□□□ -1.18
USP28-206ENST00000538224 MICU3Q86XE3 530 aa7.7□□□□□ -1.18
USP28-206ENST00000538224 CCAR1Q8IX12 1150 aaKnown RBP7.7□□□□□ -1.18
USP28-206ENST00000538224 LCORLQ8N3X6 602 aa7.7□□□□□ -1.18
USP28-206ENST00000538224 FSIP1Q8NA03 581 aa7.7□□□□□ -1.18
USP28-206ENST00000538224 TDRD7Q8NHU6 1098 aaKnown RBP7.7□□□□□ -1.18
USP28-206ENST00000538224 IGDCC4Q8TDY8 1250 aa7.7□□□□□ -1.18
USP28-206ENST00000538224 NOL10Q9BSC4 688 aaKnown RBP7.7□□□□□ -1.18
USP28-206ENST00000538224 UBAC1Q9BSL1 405 aa7.7□□□□□ -1.18
USP28-206ENST00000538224 NAT10Q9H0A0 1025 aaKnown RBP7.7□□□□□ -1.18
USP28-206ENST00000538224 ANO10Q9NW15 660 aa7.7□□□□□ -1.18
USP28-206ENST00000538224 MRVI1Q9Y6F6 885 aa7.7□□□□□ -1.18
USP28-206ENST00000538224 FOCADQ5VW36 1801 aa7.7□□□□□ -1.18
USP28-206ENST00000538224 CDK5RAP2Q96SN8 1893 aa7.69□□□□□ -1.18
USP28-206ENST00000538224 GOLGA6L19H0YKK7 550 aa7.69□□□□□ -1.18
USP28-206ENST00000538224 NPHP1O15259 732 aa7.69□□□□□ -1.18
USP28-206ENST00000538224 SPTLC2O15270 562 aa7.69□□□□□ -1.18
USP28-206ENST00000538224 PPP6R2O75170 966 aa7.69□□□□□ -1.18
USP28-206ENST00000538224 DEXIO95424 95 aa7.69□□□□□ -1.18
USP28-206ENST00000538224 FOSBP53539 338 aa7.69□□□□□ -1.18
USP28-206ENST00000538224 DHX8Q14562 1220 aaKnown RBP7.69□□□□□ -1.18
USP28-206ENST00000538224 RTN1Q16799 776 aa7.69□□□□□ -1.18
USP28-206ENST00000538224 GLIPR1L2Q4G1C9 344 aa7.69□□□□□ -1.18
USP28-206ENST00000538224 TPRNQ4KMQ1 711 aa7.69□□□□□ -1.18
USP28-206ENST00000538224 ANO6Q4KMQ2 910 aa7.69□□□□□ -1.18
USP28-206ENST00000538224 MEX3CQ5U5Q3 659 aaKnown RBP7.69□□□□□ -1.18
USP28-206ENST00000538224 FBXO33Q7Z6M2 555 aa7.69□□□□□ -1.18
USP28-206ENST00000538224 IQCA1Q86XH1 822 aa7.69□□□□□ -1.18
USP28-206ENST00000538224 LINC00301Q8NCQ3 95 aa7.69□□□□□ -1.18
USP28-206ENST00000538224 CRNKL1Q9BZJ0 848 aaKnown RBP7.69□□□□□ -1.18
USP28-206ENST00000538224 GPHNQ9NQX3 736 aaPredicted RBP7.69□□□□□ -1.18
USP28-206ENST00000538224 TOMM22Q9NS69 142 aa7.69□□□□□ -1.18
USP28-206ENST00000538224 ATP8A2Q9NTI2 1148 aa7.69□□□□□ -1.18
USP28-206ENST00000538224 RBM28Q9NW13 759 aaKnown RBP7.69□□□□□ -1.18
USP28-206ENST00000538224 ZSWIM5Q9P217 1185 aa7.69□□□□□ -1.18
USP28-206ENST00000538224 ARPP21Q9UBL0 812 aaPredicted RBP7.69□□□□□ -1.18
USP28-206ENST00000538224 ABCF2Q9UG63 623 aa7.69□□□□□ -1.18
USP28-206ENST00000538224 DDX60LQ5H9U9 1706 aaKnown RBP7.69□□□□□ -1.18
USP28-206ENST00000538224 OFD1O75665 1012 aa7.68□□□□□ -1.18
USP28-206ENST00000538224 TPM2P07951 284 aa7.68□□□□□ -1.18
USP28-206ENST00000538224 U2AF2P26368 475 aaKnown RBP eCLIP7.68□□□□□ -1.18
USP28-206ENST00000538224 CDC25BP30305 580 aa7.68□□□□□ -1.18
USP28-206ENST00000538224 HIBADHP31937 336 aaKnown RBP7.68□□□□□ -1.18
USP28-206ENST00000538224 RFC4P35249 363 aa7.68□□□□□ -1.18
USP28-206ENST00000538224 GYG1P46976 350 aa7.68□□□□□ -1.18
USP28-206ENST00000538224 ZNF165P49910 485 aa7.68□□□□□ -1.18
USP28-206ENST00000538224 TPM4P67936 248 aa7.68□□□□□ -1.18
USP28-206ENST00000538224 GSTO1P78417 241 aa7.68□□□□□ -1.18
USP28-206ENST00000538224 AKAP17AQ02040 695 aaKnown RBP7.68□□□□□ -1.18
USP28-206ENST00000538224 GUCY1B3Q02153 619 aa7.68□□□□□ -1.18
USP28-206ENST00000538224 CEBPZQ03701 1054 aaKnown RBP7.68□□□□□ -1.18
USP28-206ENST00000538224 CTDSPL2Q05D32 466 aa7.68□□□□□ -1.18
USP28-206ENST00000538224 NTRK3Q16288 839 aa7.68□□□□□ -1.18
USP28-206ENST00000538224 CAMK4Q16566 473 aa7.68□□□□□ -1.18
USP28-206ENST00000538224 CCDC178Q5BJE1 867 aa7.68□□□□□ -1.18
USP28-206ENST00000538224 TRAPPC3LQ5T215 181 aa7.68□□□□□ -1.18
USP28-206ENST00000538224 ANO1Q5XXA6 986 aa7.68□□□□□ -1.18
USP28-206ENST00000538224 KRT40Q6A162 431 aa7.68□□□□□ -1.18
USP28-206ENST00000538224 BICDL1Q6ZP65 573 aa7.68□□□□□ -1.18
USP28-206ENST00000538224 ILDR1Q86SU0 546 aaPredicted RBP7.68□□□□□ -1.18
USP28-206ENST00000538224 AMOTL1Q8IY63 956 aa7.68□□□□□ -1.18
USP28-206ENST00000538224 CKAP2LQ8IYA6 745 aa7.68□□□□□ -1.18
USP28-206ENST00000538224 CEP57L1Q8IYX8 460 aa7.68□□□□□ -1.18
USP28-206ENST00000538224 ZNF654Q8IZM8 581 aa7.68□□□□□ -1.18
USP28-206ENST00000538224 PIAS4Q8N2W9 510 aaPredicted RBP7.68□□□□□ -1.18
USP28-206ENST00000538224 MIGA1Q8NAN2 632 aa7.68□□□□□ -1.18
USP28-206ENST00000538224 ENGASEQ8NFI3 743 aa7.68□□□□□ -1.18
USP28-206ENST00000538224 WDR66Q8TBY9 1149 aa7.68□□□□□ -1.18
USP28-206ENST00000538224 FAM84BQ96KN1 310 aaPredicted RBP7.68□□□□□ -1.18
USP28-206ENST00000538224 TIGD1Q96MW7 591 aa7.68□□□□□ -1.18
USP28-206ENST00000538224 RIOK1Q9BRS2 568 aaKnown RBP7.68□□□□□ -1.18
USP28-206ENST00000538224 RNF26Q9BY78 433 aaPredicted RBP7.68□□□□□ -1.18
USP28-206ENST00000538224 BCL2L12Q9HB09 334 aa7.68□□□□□ -1.18
USP28-206ENST00000538224 HOOK1Q9UJC3 728 aaKnown RBP7.68□□□□□ -1.18
USP28-206ENST00000538224 CEP131Q9UPN4 1083 aa7.68□□□□□ -1.18
USP28-206ENST00000538224 LEMD3Q9Y2U8 911 aa7.68□□□□□ -1.18
USP28-206ENST00000538224 MORC2Q9Y6X9 1032 aaPredicted RBP7.68□□□□□ -1.18
USP28-206ENST00000538224 BRWD3Q6RI45 1802 aa7.68□□□□□ -1.18
USP28-206ENST00000538224 MYH8P13535 1937 aa7.68□□□□□ -1.18
USP28-206ENST00000538224 QSER1Q2KHR3 1735 aa7.67□□□□□ -1.18
USP28-206ENST00000538224 RGPD3A6NKT7 1758 aaPredicted RBP7.67□□□□□ -1.18
USP28-206ENST00000538224 RGPD4Q7Z3J3 1758 aa7.67□□□□□ -1.18
USP28-206ENST00000538224 ORC4O43929 436 aa7.67□□□□□ -1.18
USP28-206ENST00000538224 ONECUT3O60422 494 aaPredicted RBP7.67□□□□□ -1.18
USP28-206ENST00000538224 DTNBO60941 627 aa7.67□□□□□ -1.18
USP28-206ENST00000538224 DDAH1O94760 285 aa7.67□□□□□ -1.18
USP28-206ENST00000538224 BMP15O95972 392 aa7.67□□□□□ -1.18
USP28-206ENST00000538224 FGRP09769 529 aa7.67□□□□□ -1.18
USP28-206ENST00000538224 CMA1P23946 247 aa7.67□□□□□ -1.18
USP28-206ENST00000538224 ST5P78524 1137 aa7.67□□□□□ -1.18
USP28-206ENST00000538224 SNW1Q13573 536 aaKnown RBP7.67□□□□□ -1.18
USP28-206ENST00000538224 GRAPQ13588 217 aa7.67□□□□□ -1.18
USP28-206ENST00000538224 SLC39A14Q15043 492 aa7.67□□□□□ -1.18
USP28-206ENST00000538224 SBK1Q52WX2 424 aa7.67□□□□□ -1.18
USP28-206ENST00000538224 RILPL1Q5EBL4 403 aa7.67□□□□□ -1.18
USP28-206ENST00000538224 RRP12Q5JTH9 1297 aaKnown RBP7.67□□□□□ -1.18
USP28-206ENST00000538224 SLC27A3Q5K4L6 730 aa7.67□□□□□ -1.18
USP28-206ENST00000538224 SARM1Q6SZW1 724 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms