RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 DYMQ7RTS9 669 aa12.59□□□□□ -0.39
LINC00346-201ENST00000538077 CCDC42Q96M95 316 aa12.59□□□□□ -0.39
LINC00346-201ENST00000538077 FAM169AQ9Y6X4 670 aa12.59□□□□□ -0.39
LINC00346-201ENST00000538077 CTAGE9A4FU28 777 aa12.59□□□□□ -0.39
LINC00346-201ENST00000538077 CHMLP26374 656 aa12.58□□□□□ -0.4
LINC00346-201ENST00000538077 DNAJC10Q8IXB1 793 aa12.58□□□□□ -0.4
LINC00346-201ENST00000538077 NACA2Q9H009 215 aa12.58□□□□□ -0.4
LINC00346-201ENST00000538077 EIF2AK4Q9P2K8 1649 aaKnown RBP12.58□□□□□ -0.4
LINC00346-201ENST00000538077 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.58□□□□□ -0.4
LINC00346-201ENST00000538077 DAPK3O43293 454 aa12.58□□□□□ -0.4
LINC00346-201ENST00000538077 RHOXF2BP0C7M4 288 aa12.58□□□□□ -0.4
LINC00346-201ENST00000538077 PPP2R5CQ13362 524 aa12.58□□□□□ -0.4
LINC00346-201ENST00000538077 FAM47CQ5HY64 1035 aa12.58□□□□□ -0.4
LINC00346-201ENST00000538077 SPECC1LQ69YQ0 1117 aa12.58□□□□□ -0.4
LINC00346-201ENST00000538077 CMTR1Q8N1G2 835 aaKnown RBP12.58□□□□□ -0.4
LINC00346-201ENST00000538077 SMCR8Q8TEV9 937 aaPredicted RBP12.58□□□□□ -0.4
LINC00346-201ENST00000538077 RHOXF2Q9BQY4 288 aa12.58□□□□□ -0.4
LINC00346-201ENST00000538077 PPANQ9NQ55 473 aaKnown RBP12.58□□□□□ -0.4
LINC00346-201ENST00000538077 PTPRKQ15262 1439 aa12.58□□□□□ -0.4
LINC00346-201ENST00000538077 SLC27A2O14975 620 aa12.58□□□□□ -0.4
LINC00346-201ENST00000538077 GTF2IP78347 998 aa12.58□□□□□ -0.4
LINC00346-201ENST00000538077 PLEKHM2Q8IWE5 1019 aa12.58□□□□□ -0.4
LINC00346-201ENST00000538077 SPATA5Q8NB90 893 aa12.58□□□□□ -0.4
LINC00346-201ENST00000538077 RNF169Q8NCN4 708 aa12.58□□□□□ -0.4
LINC00346-201ENST00000538077 PHKBQ93100 1093 aa12.58□□□□□ -0.4
LINC00346-201ENST00000538077 HAUS7Q99871 368 aa12.58□□□□□ -0.4
LINC00346-201ENST00000538077 TYRO3Q06418 890 aa12.58□□□□□ -0.4
LINC00346-201ENST00000538077 IFT74Q96LB3 600 aa12.58□□□□□ -0.4
LINC00346-201ENST00000538077 NOC4LQ9BVI4 516 aaKnown RBP12.58□□□□□ -0.4
LINC00346-201ENST00000538077 KCNK9Q9NPC2 374 aa12.58□□□□□ -0.4
LINC00346-201ENST00000538077 SH3TC1Q8TE82 1336 aa12.58□□□□□ -0.4
LINC00346-201ENST00000538077 ERCC5P28715 1186 aaPredicted RBP12.58□□□□□ -0.4
LINC00346-201ENST00000538077 MCM6Q14566 821 aa12.58□□□□□ -0.4
LINC00346-201ENST00000538077 MSANTD4Q8NCY6 345 aa12.58□□□□□ -0.4
LINC00346-201ENST00000538077 CLSTN2Q9H4D0 955 aa12.58□□□□□ -0.4
LINC00346-201ENST00000538077 EYA2O00167 538 aa12.57□□□□□ -0.4
LINC00346-201ENST00000538077 FAM182BQ5T319 152 aa12.57□□□□□ -0.4
LINC00346-201ENST00000538077 CFAP58Q5T655 872 aa12.57□□□□□ -0.4
LINC00346-201ENST00000538077 VPS16Q9H269 839 aa12.57□□□□□ -0.4
LINC00346-201ENST00000538077 USP19O94966 1318 aa12.57□□□□□ -0.4
LINC00346-201ENST00000538077 GPAA1O43292 621 aa12.57□□□□□ -0.4
LINC00346-201ENST00000538077 SMTNP53814 917 aa12.57□□□□□ -0.4
LINC00346-201ENST00000538077 LONRF3Q496Y0 759 aa12.57□□□□□ -0.4
LINC00346-201ENST00000538077 METTL13Q8N6R0 699 aa12.57□□□□□ -0.4
LINC00346-201ENST00000538077 USP40Q9NVE5 1235 aa12.57□□□□□ -0.4
LINC00346-201ENST00000538077 TXNDC16Q9P2K2 825 aa12.57□□□□□ -0.4
LINC00346-201ENST00000538077 USTQ9Y2C2 406 aa12.57□□□□□ -0.4
LINC00346-201ENST00000538077 NUP160Q12769 1436 aa12.57□□□□□ -0.4
LINC00346-201ENST00000538077 IRX3P78415 501 aaPredicted RBP12.57□□□□□ -0.4
LINC00346-201ENST00000538077 KIF5AQ12840 1032 aa12.57□□□□□ -0.4
LINC00346-201ENST00000538077 LMBR1Q8WVP7 490 aa12.57□□□□□ -0.4
LINC00346-201ENST00000538077 E7EVH7 732 aa12.57□□□□□ -0.4
LINC00346-201ENST00000538077 RPS6KB1P23443 525 aa12.57□□□□□ -0.4
LINC00346-201ENST00000538077 SLC1A4P43007 532 aa12.57□□□□□ -0.4
LINC00346-201ENST00000538077 ZAP70P43403 619 aa12.57□□□□□ -0.4
LINC00346-201ENST00000538077 PARP10Q53GL7 1025 aa12.57□□□□□ -0.4
LINC00346-201ENST00000538077 LEO1Q8WVC0 666 aaPredicted RBP12.57□□□□□ -0.4
LINC00346-201ENST00000538077 SOS1Q07889 1333 aaPredicted RBP12.56□□□□□ -0.4
LINC00346-201ENST00000538077 ARHGEF35A5YM69 484 aa12.56□□□□□ -0.4
LINC00346-201ENST00000538077 MYCP01106 439 aaPredicted RBP12.56□□□□□ -0.4
LINC00346-201ENST00000538077 PRPHP41219 470 aa12.56□□□□□ -0.4
LINC00346-201ENST00000538077 AZI2Q9H6S1 392 aa12.56□□□□□ -0.4
LINC00346-201ENST00000538077 ZNF532Q9HCE3 1301 aa12.56□□□□□ -0.4
LINC00346-201ENST00000538077 SNX16P57768 344 aa12.56□□□□□ -0.4
LINC00346-201ENST00000538077 DLGAP5Q15398 846 aa12.56□□□□□ -0.4
LINC00346-201ENST00000538077 C6orf163Q5TEZ5 329 aa12.56□□□□□ -0.4
LINC00346-201ENST00000538077 DDX21Q9NR30 783 aaKnown RBP eCLIP12.56□□□□□ -0.4
LINC00346-201ENST00000538077 UVSSAQ2YD98 709 aa12.56□□□□□ -0.4
LINC00346-201ENST00000538077 NELFCDQ8IXH7 590 aa12.56□□□□□ -0.4
LINC00346-201ENST00000538077 MYCT1Q8N699 235 aa12.56□□□□□ -0.4
LINC00346-201ENST00000538077 UBLCP1Q8WVY7 318 aaPredicted RBP12.56□□□□□ -0.4
LINC00346-201ENST00000538077 KCNJ14Q9UNX9 436 aa12.56□□□□□ -0.4
LINC00346-201ENST00000538077 ABCC2Q92887 1545 aa12.56□□□□□ -0.4
LINC00346-201ENST00000538077 TLDC2A0PJX2 215 aa12.56□□□□□ -0.4
LINC00346-201ENST00000538077 CRCPO75575 148 aa12.56□□□□□ -0.4
LINC00346-201ENST00000538077 ADCY7P51828 1080 aa12.56□□□□□ -0.4
LINC00346-201ENST00000538077 KLHL40Q2TBA0 621 aa12.56□□□□□ -0.4
LINC00346-201ENST00000538077 TTLL3Q9Y4R7 772 aa12.56□□□□□ -0.4
LINC00346-201ENST00000538077 CALUO43852 315 aaPredicted RBP12.55□□□□□ -0.4
LINC00346-201ENST00000538077 IFRD2Q12894 506 aaPredicted RBP12.55□□□□□ -0.4
LINC00346-201ENST00000538077 BRDTQ58F21 947 aaPredicted RBP12.55□□□□□ -0.4
LINC00346-201ENST00000538077 FBF1Q8TES7 1133 aa12.55□□□□□ -0.4
LINC00346-201ENST00000538077 RRP9O43818 475 aaKnown RBP12.55□□□□□ -0.4
LINC00346-201ENST00000538077 LRMPQ12912 555 aa12.55□□□□□ -0.4
LINC00346-201ENST00000538077 GEN1Q17RS7 908 aa12.55□□□□□ -0.4
LINC00346-201ENST00000538077 SEL1L2Q5TEA6 688 aa12.55□□□□□ -0.4
LINC00346-201ENST00000538077 C2CD5Q86YS7 1000 aa12.55□□□□□ -0.4
LINC00346-201ENST00000538077 M0QZ92 97 aa12.55□□□□□ -0.4
LINC00346-201ENST00000538077 STX10O60499 249 aa12.55□□□□□ -0.4
LINC00346-201ENST00000538077 KRT83P78385 493 aa12.55□□□□□ -0.4
LINC00346-201ENST00000538077 GOLGA1Q92805 767 aa12.55□□□□□ -0.4
LINC00346-201ENST00000538077 GCNT3O95395 438 aa12.55□□□□□ -0.4
LINC00346-201ENST00000538077 TNFAIP3P21580 790 aa12.55□□□□□ -0.4
LINC00346-201ENST00000538077 BLZF1Q9H2G9 400 aa12.55□□□□□ -0.4
LINC00346-201ENST00000538077 TTF2Q9UNY4 1162 aaKnown RBP12.55□□□□□ -0.4
LINC00346-201ENST00000538077 MYO5CQ9NQX4 1742 aa12.55□□□□□ -0.4
LINC00346-201ENST00000538077 GAS8O95995 478 aa12.54□□□□□ -0.4
LINC00346-201ENST00000538077 BAG6P46379 1132 aa12.54□□□□□ -0.4
LINC00346-201ENST00000538077 SPAG1Q07617 926 aa12.54□□□□□ -0.4
LINC00346-201ENST00000538077 MKRN3Q13064 507 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms