RNA–Protein interactions for RNA: ENST00000537392.1

PMFBP1-206, Transcript of polyamine modulated factor 1 binding protein 1, humanhuman

TSL 2

Gene PMFBP1, Length 2,038 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1-206ENST00000537392 TTF2Q9UNY4 1162 aaKnown RBP11.14□□□□□ -0.63
PMFBP1-206ENST00000537392 SMC3Q9UQE7 1217 aa11.14□□□□□ -0.63
PMFBP1-206ENST00000537392 ZDHHC9Q9Y397 364 aa11.14□□□□□ -0.63
PMFBP1-206ENST00000537392 GOLGB1Q14789 3259 aaKnown RBP11.13□□□□□ -0.63
PMFBP1-206ENST00000537392 DTNBO60941 627 aa11.13□□□□□ -0.63
PMFBP1-206ENST00000537392 KDM4AO75164 1064 aa11.13□□□□□ -0.63
PMFBP1-206ENST00000537392 RHBDL3P58872 404 aa11.13□□□□□ -0.63
PMFBP1-206ENST00000537392 EVX2Q03828 476 aa11.13□□□□□ -0.63
PMFBP1-206ENST00000537392 SOGA3Q5TF21 947 aa11.13□□□□□ -0.63
PMFBP1-206ENST00000537392 TGFBRAP1Q8WUH2 860 aa11.13□□□□□ -0.63
PMFBP1-206ENST00000537392 ZNF274Q96GC6 653 aaPredicted RBP11.13□□□□□ -0.63
PMFBP1-206ENST00000537392 ZSWIM5Q9P217 1185 aa11.13□□□□□ -0.63
PMFBP1-206ENST00000537392 PPP1R1BQ9UD71 204 aaPredicted RBP11.13□□□□□ -0.63
PMFBP1-206ENST00000537392 CD2APQ9Y5K6 639 aa11.13□□□□□ -0.63
PMFBP1-206ENST00000537392 MYH2Q9UKX2 1941 aa11.13□□□□□ -0.63
PMFBP1-206ENST00000537392 USP17L3A6NCW0 530 aa11.13□□□□□ -0.63
PMFBP1-206ENST00000537392 USP17L4A6NCW7 530 aa11.13□□□□□ -0.63
PMFBP1-206ENST00000537392 YDJCA8MPS7 323 aa11.13□□□□□ -0.63
PMFBP1-206ENST00000537392 SH2B2O14492 632 aaPredicted RBP11.13□□□□□ -0.63
PMFBP1-206ENST00000537392 FGRP09769 529 aa11.13□□□□□ -0.63
PMFBP1-206ENST00000537392 USP17L8P0C7I0 530 aa11.13□□□□□ -0.63
PMFBP1-206ENST00000537392 CYP2D6P10635 497 aa11.13□□□□□ -0.63
PMFBP1-206ENST00000537392 PLCG2P16885 1265 aa11.13□□□□□ -0.63
PMFBP1-206ENST00000537392 GJB2P29033 226 aa11.13□□□□□ -0.63
PMFBP1-206ENST00000537392 PDIA3P30101 505 aaKnown RBP11.13□□□□□ -0.63
PMFBP1-206ENST00000537392 SCRN1Q12765 414 aa11.13□□□□□ -0.63
PMFBP1-206ENST00000537392 DALRD3Q5D0E6 543 aaKnown RBP11.13□□□□□ -0.63
PMFBP1-206ENST00000537392 RRP12Q5JTH9 1297 aaKnown RBP11.13□□□□□ -0.63
PMFBP1-206ENST00000537392 USP17L1Q7RTZ2 530 aa11.13□□□□□ -0.63
PMFBP1-206ENST00000537392 TMEM87BQ96K49 555 aa11.13□□□□□ -0.63
PMFBP1-206ENST00000537392 TOMM22Q9NS69 142 aa11.13□□□□□ -0.63
PMFBP1-206ENST00000537392 MCM9Q9NXL9 1143 aa11.13□□□□□ -0.63
PMFBP1-206ENST00000537392 BRPF3Q9ULD4 1205 aa11.13□□□□□ -0.63
PMFBP1-206ENST00000537392 ANGEL1Q9UNK9 670 aaKnown RBP11.13□□□□□ -0.63
PMFBP1-206ENST00000537392 ZNF646O15015 1829 aaPredicted RBP11.12□□□□□ -0.63
PMFBP1-206ENST00000537392 BRD1O95696 1058 aa11.12□□□□□ -0.63
PMFBP1-206ENST00000537392 SCNN1DP51172 638 aa11.12□□□□□ -0.63
PMFBP1-206ENST00000537392 TEX11Q8IYF3 940 aa11.12□□□□□ -0.63
PMFBP1-206ENST00000537392 IGDCC4Q8TDY8 1250 aa11.12□□□□□ -0.63
PMFBP1-206ENST00000537392 ZNF277Q9NRM2 450 aaPredicted RBP11.12□□□□□ -0.63
PMFBP1-206ENST00000537392 BAZ2AQ9UIF9 1905 aaKnown RBP11.12□□□□□ -0.63
PMFBP1-206ENST00000537392 SCN9AQ15858 1988 aa11.12□□□□□ -0.63
PMFBP1-206ENST00000537392 KLF18A0A0U1RQI7 1052 aa11.11□□□□□ -0.63
PMFBP1-206ENST00000537392 PCP11498 1178 aaKnown RBP11.11□□□□□ -0.63
PMFBP1-206ENST00000537392 C12orf60Q5U649 245 aa11.11□□□□□ -0.63
PMFBP1-206ENST00000537392 HHIPL2Q6UWX4 724 aa11.11□□□□□ -0.63
PMFBP1-206ENST00000537392 MAPKAPK5Q8IW41 473 aa11.11□□□□□ -0.63
PMFBP1-206ENST00000537392 KLHL34Q8N239 644 aa11.11□□□□□ -0.63
PMFBP1-206ENST00000537392 LY9Q9HBG7 655 aa11.11□□□□□ -0.63
PMFBP1-206ENST00000537392 SENP2Q9HC62 589 aa11.11□□□□□ -0.63
PMFBP1-206ENST00000537392 NAP1L2Q9ULW6 460 aaPredicted RBP11.11□□□□□ -0.63
PMFBP1-206ENST00000537392 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.11□□□□□ -0.63
PMFBP1-206ENST00000537392 COL4A5P29400 1685 aa11.11□□□□□ -0.63
PMFBP1-206ENST00000537392 CCT2P78371 535 aaKnown RBP11.11□□□□□ -0.63
PMFBP1-206ENST00000537392 TMEM67Q5HYA8 995 aa11.11□□□□□ -0.63
PMFBP1-206ENST00000537392 KIAA0825Q8IV33 1275 aa11.11□□□□□ -0.63
PMFBP1-206ENST00000537392 LARGE2Q8N3Y3 721 aa11.11□□□□□ -0.63
PMFBP1-206ENST00000537392 ESR2Q92731 530 aa11.11□□□□□ -0.63
PMFBP1-206ENST00000537392 TEKT1Q969V4 418 aa11.11□□□□□ -0.63
PMFBP1-206ENST00000537392 VPS33BQ9H267 617 aa11.11□□□□□ -0.63
PMFBP1-206ENST00000537392 HPS5Q9UPZ3 1129 aa11.11□□□□□ -0.63
PMFBP1-206ENST00000537392 FLT1P17948 1338 aa11.11□□□□□ -0.63
PMFBP1-206ENST00000537392 LAMB1P07942 1786 aa11.1□□□□□ -0.63
PMFBP1-206ENST00000537392 IFIT3O14879 490 aaKnown RBP11.1□□□□□ -0.63
PMFBP1-206ENST00000537392 ORC4O43929 436 aa11.1□□□□□ -0.63
PMFBP1-206ENST00000537392 JAK2O60674 1132 aa11.1□□□□□ -0.63
PMFBP1-206ENST00000537392 PRDM1O75626 825 aa11.1□□□□□ -0.63
PMFBP1-206ENST00000537392 SLC3A2P08195 630 aaKnown RBP11.1□□□□□ -0.63
PMFBP1-206ENST00000537392 SYT1P21579 422 aa11.1□□□□□ -0.63
PMFBP1-206ENST00000537392 LIFRP42702 1097 aa11.1□□□□□ -0.63
PMFBP1-206ENST00000537392 CRKP46108 304 aa11.1□□□□□ -0.63
PMFBP1-206ENST00000537392 SLC4A8Q2Y0W8 1093 aa11.1□□□□□ -0.63
PMFBP1-206ENST00000537392 APOBEC3HQ6NTF7 200 aaKnown RBP11.1□□□□□ -0.63
PMFBP1-206ENST00000537392 CLEC17AQ6ZS10 378 aa11.1□□□□□ -0.63
PMFBP1-206ENST00000537392 SGMS1Q86VZ5 419 aa11.1□□□□□ -0.63
PMFBP1-206ENST00000537392 ZKSCAN3Q9BRR0 538 aa11.1□□□□□ -0.63
PMFBP1-206ENST00000537392 MTA3Q9BTC8 594 aa11.1□□□□□ -0.63
PMFBP1-206ENST00000537392 MRIQ9BWK5 157 aa11.1□□□□□ -0.63
PMFBP1-206ENST00000537392 NCOA5Q9HCD5 579 aaKnown RBP11.1□□□□□ -0.63
PMFBP1-206ENST00000537392 ROBO3Q96MS0 1386 aa11.1□□□□□ -0.63
PMFBP1-206ENST00000537392 BRCA1P38398 1863 aaKnown RBP11.1□□□□□ -0.63
PMFBP1-206ENST00000537392 GOLGA8BA8MQT2 603 aa11.09□□□□□ -0.63
PMFBP1-206ENST00000537392 CTDNEP1O95476 244 aa11.09□□□□□ -0.63
PMFBP1-206ENST00000537392 MCM4P33991 863 aa11.09□□□□□ -0.63
PMFBP1-206ENST00000537392 NSUN7Q8NE18 718 aaKnown RBP11.09□□□□□ -0.63
PMFBP1-206ENST00000537392 SMARCC2Q8TAQ2 1214 aa11.09□□□□□ -0.63
PMFBP1-206ENST00000537392 LLPHQ9BRT6 129 aaKnown RBP11.09□□□□□ -0.63
PMFBP1-206ENST00000537392 SAP30BPQ9UHR5 308 aaKnown RBP11.09□□□□□ -0.63
PMFBP1-206ENST00000537392 NAV1Q8NEY1 1877 aa11.09□□□□□ -0.63
PMFBP1-206ENST00000537392 DDX60LQ5H9U9 1706 aaKnown RBP11.09□□□□□ -0.63
PMFBP1-206ENST00000537392 ADAMTSL1Q8N6G6 1762 aa11.09□□□□□ -0.63
PMFBP1-206ENST00000537392 STX6O43752 255 aa11.09□□□□□ -0.63
PMFBP1-206ENST00000537392 RANBP6O60518 1105 aaKnown RBP11.09□□□□□ -0.63
PMFBP1-206ENST00000537392 POLR3DP05423 398 aaPredicted RBP11.09□□□□□ -0.63
PMFBP1-206ENST00000537392 IARSP41252 1262 aaKnown RBP11.09□□□□□ -0.63
PMFBP1-206ENST00000537392 PLCD1P51178 756 aa11.09□□□□□ -0.63
PMFBP1-206ENST00000537392 HDLBPQ00341 1268 aaKnown RBP11.09□□□□□ -0.63
PMFBP1-206ENST00000537392 PDE4BQ07343 736 aa11.09□□□□□ -0.63
PMFBP1-206ENST00000537392 SART3Q15020 963 aaKnown RBP11.09□□□□□ -0.63
PMFBP1-206ENST00000537392 FOXD4L5Q5VV16 416 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms