RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 NOL9Q5SY16 702 aaKnown RBP12.11□□□□□ -0.47
CCDC170-202ENST00000537358 PRPF38BQ5VTL8 546 aaKnown RBP12.11□□□□□ -0.47
CCDC170-202ENST00000537358 NOL10Q9BSC4 688 aaKnown RBP12.11□□□□□ -0.47
CCDC170-202ENST00000537358 IDI2Q9BXS1 227 aa12.11□□□□□ -0.47
CCDC170-202ENST00000537358 FAM198AQ9UFP1 575 aa12.11□□□□□ -0.47
CCDC170-202ENST00000537358 ZNF112Q9UJU3 913 aa12.11□□□□□ -0.47
CCDC170-202ENST00000537358 MROH7-TTC4A0A0A0MT08 1334 aa12.11□□□□□ -0.47
CCDC170-202ENST00000537358 RBBP6Q7Z6E9 1792 aaKnown RBP12.1□□□□□ -0.47
CCDC170-202ENST00000537358 CXCL11O14625 94 aa12.1□□□□□ -0.47
CCDC170-202ENST00000537358 MAP4K4O95819 1239 aaPredicted RBP12.1□□□□□ -0.47
CCDC170-202ENST00000537358 UQCRFS1P1P0C7P4 283 aa12.1□□□□□ -0.47
CCDC170-202ENST00000537358 BTDP43251 543 aa12.1□□□□□ -0.47
CCDC170-202ENST00000537358 HNRNPUQ00839 825 aaKnown RBP eCLIP12.1□□□□□ -0.47
CCDC170-202ENST00000537358 PICALMQ13492 652 aa12.1□□□□□ -0.47
CCDC170-202ENST00000537358 ANKRD23Q86SG2 305 aa12.1□□□□□ -0.47
CCDC170-202ENST00000537358 SPATA5Q8NB90 893 aa12.1□□□□□ -0.47
CCDC170-202ENST00000537358 ARMC5Q96C12 935 aa12.1□□□□□ -0.47
CCDC170-202ENST00000537358 FAM163AQ96GL9 167 aaPredicted RBP12.1□□□□□ -0.47
CCDC170-202ENST00000537358 KCNH4Q9UQ05 1017 aa12.1□□□□□ -0.47
CCDC170-202ENST00000537358 KIAA0100Q14667 2235 aaKnown RBP12.09□□□□□ -0.47
CCDC170-202ENST00000537358 PDHXO00330 501 aa12.09□□□□□ -0.47
CCDC170-202ENST00000537358 HOXD10P28358 340 aa12.09□□□□□ -0.47
CCDC170-202ENST00000537358 PRMT2P55345 433 aa12.09□□□□□ -0.47
CCDC170-202ENST00000537358 LACTBP83111 547 aaPredicted RBP12.09□□□□□ -0.47
CCDC170-202ENST00000537358 MECOMQ03112 1051 aa12.09□□□□□ -0.47
CCDC170-202ENST00000537358 FASTKD5Q7L8L6 764 aaKnown RBP12.09□□□□□ -0.47
CCDC170-202ENST00000537358 SCYL3Q8IZE3 742 aa12.09□□□□□ -0.47
CCDC170-202ENST00000537358 PARK7Q99497 189 aaKnown RBP12.09□□□□□ -0.47
CCDC170-202ENST00000537358 RAI14Q9P0K7 980 aa12.09□□□□□ -0.47
CCDC170-202ENST00000537358 LRP2BPQ9P2M1 347 aa12.09□□□□□ -0.47
CCDC170-202ENST00000537358 SLC4A8Q2Y0W8 1093 aa12.08□□□□□ -0.48
CCDC170-202ENST00000537358 CCDC158Q5M9N0 1113 aa12.08□□□□□ -0.48
CCDC170-202ENST00000537358 TTC39AQ5SRH9 613 aa12.08□□□□□ -0.48
CCDC170-202ENST00000537358 TMEM57Q8N5G2 664 aa12.08□□□□□ -0.48
CCDC170-202ENST00000537358 HMG20BQ9P0W2 317 aa12.08□□□□□ -0.48
CCDC170-202ENST00000537358 PTCH2Q9Y6C5 1203 aa12.08□□□□□ -0.48
CCDC170-202ENST00000537358 ZHX2Q9Y6X8 837 aa12.08□□□□□ -0.48
CCDC170-202ENST00000537358 DOCK1Q14185 1865 aa12.08□□□□□ -0.48
CCDC170-202ENST00000537358 GPR75-ASB3A0A0A6YYF3 556 aa12.07□□□□□ -0.48
CCDC170-202ENST00000537358 PNMA6EA0A0J9YXQ4 647 aa12.07□□□□□ -0.48
CCDC170-202ENST00000537358 POTEFA5A3E0 1075 aa12.07□□□□□ -0.48
CCDC170-202ENST00000537358 CTNND1O60716 968 aaKnown RBP12.07□□□□□ -0.48
CCDC170-202ENST00000537358 ARID4AP29374 1257 aaPredicted RBP12.07□□□□□ -0.48
CCDC170-202ENST00000537358 ITPRIPQ8IWB1 547 aa12.07□□□□□ -0.48
CCDC170-202ENST00000537358 ZFPM1Q8IX07 1006 aa12.07□□□□□ -0.48
CCDC170-202ENST00000537358 CPA4Q9UI42 421 aa12.07□□□□□ -0.48
CCDC170-202ENST00000537358 RFX7Q2KHR2 1363 aa12.06□□□□□ -0.48
CCDC170-202ENST00000537358 SLC34A2O95436 690 aa12.06□□□□□ -0.48
CCDC170-202ENST00000537358 FMNL1O95466 1100 aaPredicted RBP12.06□□□□□ -0.48
CCDC170-202ENST00000537358 BAG3O95817 575 aa12.06□□□□□ -0.48
CCDC170-202ENST00000537358 PLCG2P16885 1265 aa12.06□□□□□ -0.48
CCDC170-202ENST00000537358 PTPRAP18433 802 aa12.06□□□□□ -0.48
CCDC170-202ENST00000537358 PSMC4P43686 418 aa12.06□□□□□ -0.48
CCDC170-202ENST00000537358 C17orf99Q6UX52 265 aa12.06□□□□□ -0.48
CCDC170-202ENST00000537358 GADL1Q6ZQY3 521 aa12.06□□□□□ -0.48
CCDC170-202ENST00000537358 NSUN4Q96CB9 384 aaKnown RBP12.06□□□□□ -0.48
CCDC170-202ENST00000537358 GCC1Q96CN9 775 aa12.06□□□□□ -0.48
CCDC170-202ENST00000537358 ZNF333Q96JL9 665 aa12.06□□□□□ -0.48
CCDC170-202ENST00000537358 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.06□□□□□ -0.48
CCDC170-202ENST00000537358 GPR108Q9NPR9 543 aa12.06□□□□□ -0.48
CCDC170-202ENST00000537358 ATRNL1Q5VV63 1379 aa12.05□□□□□ -0.48
CCDC170-202ENST00000537358 MAST2Q6P0Q8 1798 aa12.05□□□□□ -0.48
CCDC170-202ENST00000537358 HTTP42858 3142 aa12.05□□□□□ -0.48
CCDC170-202ENST00000537358 A0A0G2JLL6 359 aaPredicted RBP12.05□□□□□ -0.48
CCDC170-202ENST00000537358 DDTLA6NHG4 134 aaPredicted RBP12.05□□□□□ -0.48
CCDC170-202ENST00000537358 PHF20L1A8MW92 1017 aa12.05□□□□□ -0.48
CCDC170-202ENST00000537358 TBC1D12O60347 775 aa12.05□□□□□ -0.48
CCDC170-202ENST00000537358 IGSF3O75054 1194 aa12.05□□□□□ -0.48
CCDC170-202ENST00000537358 SURF6O75683 361 aaKnown RBP12.05□□□□□ -0.48
CCDC170-202ENST00000537358 MCAMP43121 646 aa12.05□□□□□ -0.48
CCDC170-202ENST00000537358 ATP8B2P98198 1209 aa12.05□□□□□ -0.48
CCDC170-202ENST00000537358 MAP3K10Q02779 954 aa12.05□□□□□ -0.48
CCDC170-202ENST00000537358 DIEXFQ68CQ4 756 aaKnown RBP12.05□□□□□ -0.48
CCDC170-202ENST00000537358 NAA16Q6N069 864 aaPredicted RBP12.05□□□□□ -0.48
CCDC170-202ENST00000537358 TBC1D9Q6ZT07 1266 aa12.05□□□□□ -0.48
CCDC170-202ENST00000537358 PRRT2Q7Z6L0 340 aaPredicted RBP12.05□□□□□ -0.48
CCDC170-202ENST00000537358 TEX11Q8IYF3 940 aa12.05□□□□□ -0.48
CCDC170-202ENST00000537358 RAET1EQ8TD07 263 aa12.05□□□□□ -0.48
CCDC170-202ENST00000537358 SSH3Q8TE77 659 aa12.05□□□□□ -0.48
CCDC170-202ENST00000537358 SMCR8Q8TEV9 937 aaPredicted RBP12.05□□□□□ -0.48
CCDC170-202ENST00000537358 TBC1D2Q9BYX2 928 aa12.05□□□□□ -0.48
CCDC170-202ENST00000537358 ARHGAP39Q9C0H5 1083 aa12.05□□□□□ -0.48
CCDC170-202ENST00000537358 DDX4Q9NQI0 724 aaKnown RBP12.05□□□□□ -0.48
CCDC170-202ENST00000537358 TNNQ9UQP3 1299 aa12.05□□□□□ -0.48
CCDC170-202ENST00000537358 PTPRFP10586 1907 aa12.05□□□□□ -0.48
CCDC170-202ENST00000537358 ZSWIM8A7E2V4 1837 aa12.04□□□□□ -0.48
CCDC170-202ENST00000537358 MGAMO43451 1857 aa12.04□□□□□ -0.48
CCDC170-202ENST00000537358 CENPFP49454 3210 aa12.04□□□□□ -0.48
CCDC170-202ENST00000537358 COL2A1P02458 1487 aaPredicted RBP12.04□□□□□ -0.48
CCDC170-202ENST00000537358 TRIM75PA6NK02 468 aa12.04□□□□□ -0.48
CCDC170-202ENST00000537358 ECM2O94769 699 aaPredicted RBP12.04□□□□□ -0.48
CCDC170-202ENST00000537358 MS4A1P11836 297 aa12.04□□□□□ -0.48
CCDC170-202ENST00000537358 FCGRTP55899 365 aa12.04□□□□□ -0.48
CCDC170-202ENST00000537358 RHBDL3P58872 404 aa12.04□□□□□ -0.48
CCDC170-202ENST00000537358 TNNI3KQ59H18 835 aa12.04□□□□□ -0.48
CCDC170-202ENST00000537358 PI16Q6UXB8 463 aa12.04□□□□□ -0.48
CCDC170-202ENST00000537358 SH3BP5LQ7L8J4 393 aa12.04□□□□□ -0.48
CCDC170-202ENST00000537358 TRIM34Q9BYJ4 488 aa12.04□□□□□ -0.48
CCDC170-202ENST00000537358 OSBPL5Q9H0X9 879 aaPredicted RBP12.04□□□□□ -0.48
CCDC170-202ENST00000537358 DHX36Q9H2U1 1008 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms