RNA–Protein interactions for RNA: ENST00000537304.5

LMO3-215, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 1,685 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-215ENST00000537304 SMARCC1Q92922 1105 aaPredicted RBP12.32□□□□□ -0.44
LMO3-215ENST00000537304 KAZALD1Q96I82 304 aa12.32□□□□□ -0.44
LMO3-215ENST00000537304 KCNH3Q9ULD8 1083 aa12.32□□□□□ -0.44
LMO3-215ENST00000537304 PHF8Q9UPP1 1060 aa12.32□□□□□ -0.44
LMO3-215ENST00000537304 NFE2L3Q9Y4A8 694 aa12.32□□□□□ -0.44
LMO3-215ENST00000537304 MROH7-TTC4A0A0A0MT08 1334 aa12.31□□□□□ -0.44
LMO3-215ENST00000537304 ITIH6Q6UXX5 1313 aa12.31□□□□□ -0.44
LMO3-215ENST00000537304 WDR17Q8IZU2 1322 aa12.31□□□□□ -0.44
LMO3-215ENST00000537304 A0A1B0GTH6 734 aa12.31□□□□□ -0.44
LMO3-215ENST00000537304 GOLGA8BA8MQT2 603 aa12.31□□□□□ -0.44
LMO3-215ENST00000537304 EBAG9O00559 213 aa12.31□□□□□ -0.44
LMO3-215ENST00000537304 ZFYP08048 801 aaPredicted RBP12.31□□□□□ -0.44
LMO3-215ENST00000537304 FECHP22830 423 aa12.31□□□□□ -0.44
LMO3-215ENST00000537304 PIP4K2AP48426 406 aaPredicted RBP12.31□□□□□ -0.44
LMO3-215ENST00000537304 NR1I3Q14994 352 aa12.31□□□□□ -0.44
LMO3-215ENST00000537304 ZNF569Q5MCW4 686 aa12.31□□□□□ -0.44
LMO3-215ENST00000537304 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.31□□□□□ -0.44
LMO3-215ENST00000537304 INTS13Q9NVM9 706 aa12.31□□□□□ -0.44
LMO3-215ENST00000537304 PAG1Q9NWQ8 432 aa12.31□□□□□ -0.44
LMO3-215ENST00000537304 PUF60Q9UHX1 559 aaKnown RBP12.31□□□□□ -0.44
LMO3-215ENST00000537304 SHTN1A0MZ66 631 aa12.3□□□□□ -0.44
LMO3-215ENST00000537304 SHOX2O60902 331 aaPredicted RBP12.3□□□□□ -0.44
LMO3-215ENST00000537304 RNF40O75150 1001 aa12.3□□□□□ -0.44
LMO3-215ENST00000537304 ERLIN2O94905 339 aa12.3□□□□□ -0.44
LMO3-215ENST00000537304 HSPD1P10809 573 aaKnown RBP12.3□□□□□ -0.44
LMO3-215ENST00000537304 PLCD1P51178 756 aa12.3□□□□□ -0.44
LMO3-215ENST00000537304 ADKP55263 362 aaKnown RBP12.3□□□□□ -0.44
LMO3-215ENST00000537304 PNOCQ13519 176 aa12.3□□□□□ -0.44
LMO3-215ENST00000537304 C1orf141Q5JVX7 400 aa12.3□□□□□ -0.44
LMO3-215ENST00000537304 CCDC129Q6ZRS4 1044 aa12.3□□□□□ -0.44
LMO3-215ENST00000537304 RIC3Q7Z5B4 369 aa12.3□□□□□ -0.44
LMO3-215ENST00000537304 KRI1Q8N9T8 703 aaKnown RBP12.3□□□□□ -0.44
LMO3-215ENST00000537304 EHBP1Q8NDI1 1231 aa12.3□□□□□ -0.44
LMO3-215ENST00000537304 RBM33Q96EV2 1170 aaKnown RBP12.3□□□□□ -0.44
LMO3-215ENST00000537304 DRC1Q96MC2 740 aa12.3□□□□□ -0.44
LMO3-215ENST00000537304 PNKPQ96T60 521 aa12.3□□□□□ -0.44
LMO3-215ENST00000537304 SEC62Q99442 399 aaKnown RBP12.3□□□□□ -0.44
LMO3-215ENST00000537304 CRACR2AQ9BSW2 395 aa12.3□□□□□ -0.44
LMO3-215ENST00000537304 PCDHA5Q9Y5H7 936 aa12.3□□□□□ -0.44
LMO3-215ENST00000537304 KLF18A0A0U1RQI7 1052 aa12.29□□□□□ -0.44
LMO3-215ENST00000537304 RNF113AO15541 343 aaKnown RBP12.29□□□□□ -0.44
LMO3-215ENST00000537304 GSCP56915 257 aaPredicted RBP12.29□□□□□ -0.44
LMO3-215ENST00000537304 POSTNQ15063 836 aa12.29□□□□□ -0.44
LMO3-215ENST00000537304 TTC39AQ5SRH9 613 aa12.29□□□□□ -0.44
LMO3-215ENST00000537304 TTLL5Q6EMB2 1281 aa12.29□□□□□ -0.44
LMO3-215ENST00000537304 SHC4Q6S5L8 630 aa12.29□□□□□ -0.44
LMO3-215ENST00000537304 RALYLQ86SE5 291 aaKnown RBP12.29□□□□□ -0.44
LMO3-215ENST00000537304 METTL16Q86W50 562 aaKnown RBP12.29□□□□□ -0.44
LMO3-215ENST00000537304 NCOA7Q8NI08 942 aa12.29□□□□□ -0.44
LMO3-215ENST00000537304 FAM76AQ8TAV0 307 aa12.29□□□□□ -0.44
LMO3-215ENST00000537304 WASF1Q92558 559 aa12.29□□□□□ -0.44
LMO3-215ENST00000537304 MRPL44Q9H9J2 332 aaKnown RBP12.29□□□□□ -0.44
LMO3-215ENST00000537304 WWC3Q9ULE0 1092 aa12.29□□□□□ -0.44
LMO3-215ENST00000537304 MARF1Q9Y4F3 1742 aaKnown RBP12.29□□□□□ -0.44
LMO3-215ENST00000537304 SLIT3O75094 1523 aa12.29□□□□□ -0.44
LMO3-215ENST00000537304 NEURL1BA8MQ27 555 aa12.29□□□□□ -0.44
LMO3-215ENST00000537304 VSNL1P62760 191 aa12.29□□□□□ -0.44
LMO3-215ENST00000537304 TFCP2Q12800 502 aa12.29□□□□□ -0.44
LMO3-215ENST00000537304 TRDNQ13061 729 aa12.29□□□□□ -0.44
LMO3-215ENST00000537304 GCKRQ14397 625 aa12.29□□□□□ -0.44
LMO3-215ENST00000537304 PTPAQ15257 358 aa12.29□□□□□ -0.44
LMO3-215ENST00000537304 RABL6Q3YEC7 729 aaPredicted RBP12.29□□□□□ -0.44
LMO3-215ENST00000537304 ZNF530Q6P9A1 599 aaPredicted RBP12.29□□□□□ -0.44
LMO3-215ENST00000537304 PROSER2Q86WR7 435 aaPredicted RBP12.29□□□□□ -0.44
LMO3-215ENST00000537304 CERS3Q8IU89 383 aa12.29□□□□□ -0.44
LMO3-215ENST00000537304 ZNF579Q8NAF0 562 aaKnown RBP12.29□□□□□ -0.44
LMO3-215ENST00000537304 ANKRD20A12PQ8NF67 263 aa12.29□□□□□ -0.44
LMO3-215ENST00000537304 IP6K1Q92551 441 aa12.29□□□□□ -0.44
LMO3-215ENST00000537304 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.29□□□□□ -0.44
LMO3-215ENST00000537304 LZTFL1Q9NQ48 299 aa12.29□□□□□ -0.44
LMO3-215ENST00000537304 A1CFQ9NQ94 594 aaKnown RBP12.29□□□□□ -0.44
LMO3-215ENST00000537304 MYO6Q9UM54 1294 aa12.29□□□□□ -0.44
LMO3-215ENST00000537304 CEP131Q9UPN4 1083 aa12.29□□□□□ -0.44
LMO3-215ENST00000537304 ZMYM6O95789 1325 aa12.28□□□□□ -0.44
LMO3-215ENST00000537304 PRC1O43663 620 aa12.28□□□□□ -0.44
LMO3-215ENST00000537304 MFAP3LO75121 409 aa12.28□□□□□ -0.44
LMO3-215ENST00000537304 ATP6V1AP38606 617 aa12.28□□□□□ -0.44
LMO3-215ENST00000537304 SPAG1Q07617 926 aa12.28□□□□□ -0.44
LMO3-215ENST00000537304 STIM1Q13586 685 aa12.28□□□□□ -0.44
LMO3-215ENST00000537304 MORC3Q14149 939 aa12.28□□□□□ -0.44
LMO3-215ENST00000537304 NBPF14Q5TI25 921 aa12.28□□□□□ -0.44
LMO3-215ENST00000537304 SPATA1Q5VX52 437 aa12.28□□□□□ -0.44
LMO3-215ENST00000537304 ISM2Q6H9L7 571 aa12.28□□□□□ -0.44
LMO3-215ENST00000537304 CYP26C1Q6V0L0 522 aa12.28□□□□□ -0.44
LMO3-215ENST00000537304 B4GALNT4Q76KP1 1039 aa12.28□□□□□ -0.44
LMO3-215ENST00000537304 DDX46Q7L014 1031 aaKnown RBP12.28□□□□□ -0.44
LMO3-215ENST00000537304 C14orf37Q86TY3 774 aa12.28□□□□□ -0.44
LMO3-215ENST00000537304 MICALL1Q8N3F8 863 aa12.28□□□□□ -0.44
LMO3-215ENST00000537304 IGSF22Q8N9C0 903 aa12.28□□□□□ -0.44
LMO3-215ENST00000537304 EDC3Q96F86 508 aaKnown RBP12.28□□□□□ -0.44
LMO3-215ENST00000537304 DESI2Q9BSY9 194 aa12.28□□□□□ -0.44
LMO3-215ENST00000537304 ALG1Q9BT22 464 aa12.28□□□□□ -0.44
LMO3-215ENST00000537304 METTL22Q9BUU2 404 aaPredicted RBP12.28□□□□□ -0.44
LMO3-215ENST00000537304 ZSWIM4Q9H7M6 989 aa12.28□□□□□ -0.44
LMO3-215ENST00000537304 MAN1B1Q9UKM7 699 aa12.28□□□□□ -0.44
LMO3-215ENST00000537304 CPDO75976 1380 aa12.27□□□□□ -0.44
LMO3-215ENST00000537304 RNMTO43148 476 aaKnown RBP12.27□□□□□ -0.45
LMO3-215ENST00000537304 ANXA1P04083 346 aa12.27□□□□□ -0.45
LMO3-215ENST00000537304 RHOXF2BP0C7M4 288 aa12.27□□□□□ -0.45
LMO3-215ENST00000537304 MARCKSP29966 332 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms