RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 EIF5P55010 431 aaKnown RBP17.85■□□□□ 0.45
CHFR-213ENST00000536843 GOLGA8FQ08AF8 430 aa17.85■□□□□ 0.45
CHFR-213ENST00000536843 GOLGA8DPQ0D2H9 430 aa17.85■□□□□ 0.45
CHFR-213ENST00000536843 HSP90B2PQ58FF3 399 aa17.85■□□□□ 0.45
CHFR-213ENST00000536843 CT47A1Q5JQC4 288 aaPredicted RBP17.85■□□□□ 0.45
CHFR-213ENST00000536843 KCNG4Q8TDN1 519 aa17.85■□□□□ 0.45
CHFR-213ENST00000536843 PNKPQ96T60 521 aa17.85■□□□□ 0.45
CHFR-213ENST00000536843 ABCB6Q9NP58 842 aa17.85■□□□□ 0.45
CHFR-213ENST00000536843 DNAJC21Q5F1R6 531 aaKnown RBP17.84■□□□□ 0.45
CHFR-213ENST00000536843 TOGARAM2Q6ZUX3 1019 aa17.84■□□□□ 0.45
CHFR-213ENST00000536843 CCDC12Q8WUD4 166 aaPredicted RBP17.84■□□□□ 0.45
CHFR-213ENST00000536843 CXorf56Q9H5V9 222 aa17.84■□□□□ 0.45
CHFR-213ENST00000536843 ZNF202O95125 648 aa17.84■□□□□ 0.45
CHFR-213ENST00000536843 YEATS4O95619 227 aa17.84■□□□□ 0.45
CHFR-213ENST00000536843 CHGBP05060 677 aa17.84■□□□□ 0.45
CHFR-213ENST00000536843 FOSBP53539 338 aa17.84■□□□□ 0.45
CHFR-213ENST00000536843 TUBB2AQ13885 445 aa17.84■□□□□ 0.45
CHFR-213ENST00000536843 E2F4Q16254 413 aa17.84■□□□□ 0.45
CHFR-213ENST00000536843 TUBB2BQ9BVA1 445 aa17.84■□□□□ 0.45
CHFR-213ENST00000536843 TMEM232C9JQI7 657 aa17.83■□□□□ 0.45
CHFR-213ENST00000536843 CASP8Q14790 479 aa17.83■□□□□ 0.45
CHFR-213ENST00000536843 GBP3Q9H0R5 595 aa17.83■□□□□ 0.45
CHFR-213ENST00000536843 ACBD3Q9H3P7 528 aa17.83■□□□□ 0.45
CHFR-213ENST00000536843 CWC25Q9NXE8 425 aaPredicted RBP17.83■□□□□ 0.45
CHFR-213ENST00000536843 TUBE1Q9UJT0 475 aa17.83■□□□□ 0.45
CHFR-213ENST00000536843 CCDC9Q9Y3X0 531 aaKnown RBP17.83■□□□□ 0.45
CHFR-213ENST00000536843 APPP05067 770 aa17.83■□□□□ 0.44
CHFR-213ENST00000536843 NKX1-1Q15270 411 aaPredicted RBP17.83■□□□□ 0.44
CHFR-213ENST00000536843 ZNF622Q969S3 477 aaKnown RBP eCLIP17.83■□□□□ 0.44
CHFR-213ENST00000536843 ZBTB3Q9H5J0 574 aa17.83■□□□□ 0.44
CHFR-213ENST00000536843 DONSONQ9NYP3 566 aa17.83■□□□□ 0.44
CHFR-213ENST00000536843 CDC23Q9UJX2 597 aa17.83■□□□□ 0.44
CHFR-213ENST00000536843 TOM1O60784 492 aa17.82■□□□□ 0.44
CHFR-213ENST00000536843 TUBBP07437 444 aa17.82■□□□□ 0.44
CHFR-213ENST00000536843 IL2RBP14784 551 aa17.82■□□□□ 0.44
CHFR-213ENST00000536843 STRN4Q9NRL3 753 aa17.82■□□□□ 0.44
CHFR-213ENST00000536843 INTS13Q9NVM9 706 aa17.82■□□□□ 0.44
CHFR-213ENST00000536843 POLR3EQ9NVU0 708 aa17.82■□□□□ 0.44
CHFR-213ENST00000536843 ABCA3Q99758 1704 aa17.82■□□□□ 0.44
CHFR-213ENST00000536843 PARP4Q9UKK3 1724 aaKnown RBP17.82■□□□□ 0.44
CHFR-213ENST00000536843 COL5A2P05997 1499 aaPredicted RBP17.82■□□□□ 0.44
CHFR-213ENST00000536843 WDHD1O75717 1129 aaPredicted RBP17.82■□□□□ 0.44
CHFR-213ENST00000536843 STK38Q15208 465 aa17.82■□□□□ 0.44
CHFR-213ENST00000536843 TC2NQ8N9U0 490 aa17.82■□□□□ 0.44
CHFR-213ENST00000536843 CARD10Q9BWT7 1032 aa17.82■□□□□ 0.44
CHFR-213ENST00000536843 U3KPZ7 1027 aaPredicted RBP17.82■□□□□ 0.44
CHFR-213ENST00000536843 LAMB4A4D0S4 1761 aa17.81■□□□□ 0.44
CHFR-213ENST00000536843 ANKRD65E5RJM6 399 aa17.81■□□□□ 0.44
CHFR-213ENST00000536843 SF3A1Q15459 793 aaKnown RBP17.81■□□□□ 0.44
CHFR-213ENST00000536843 CCDC102AQ96A19 550 aa17.81■□□□□ 0.44
CHFR-213ENST00000536843 HAUS7Q99871 368 aa17.81■□□□□ 0.44
CHFR-213ENST00000536843 ZSWIM4Q9H7M6 989 aa17.81■□□□□ 0.44
CHFR-213ENST00000536843 FAM204AQ9H8W3 233 aa17.81■□□□□ 0.44
CHFR-213ENST00000536843 SUGCTQ9HAC7 445 aa17.81■□□□□ 0.44
CHFR-213ENST00000536843 HMGB1P09429 215 aaKnown RBP17.81■□□□□ 0.44
CHFR-213ENST00000536843 CCDC129Q6ZRS4 1044 aa17.81■□□□□ 0.44
CHFR-213ENST00000536843 ATG9AQ7Z3C6 839 aa17.81■□□□□ 0.44
CHFR-213ENST00000536843 KCPQ6ZWJ8 1503 aa17.8■□□□□ 0.44
CHFR-213ENST00000536843 SPTLC2O15270 562 aa17.8■□□□□ 0.44
CHFR-213ENST00000536843 DDX46Q7L014 1031 aaKnown RBP17.8■□□□□ 0.44
CHFR-213ENST00000536843 SEC62Q99442 399 aaKnown RBP17.8■□□□□ 0.44
CHFR-213ENST00000536843 AGXT2Q9BYV1 514 aa17.8■□□□□ 0.44
CHFR-213ENST00000536843 KIF1CO43896 1103 aaKnown RBP17.8■□□□□ 0.44
CHFR-213ENST00000536843 CYP21A2P08686 494 aa17.8■□□□□ 0.44
CHFR-213ENST00000536843 CMA1P23946 247 aa17.8■□□□□ 0.44
CHFR-213ENST00000536843 AARSP49588 968 aaKnown RBP eCLIP17.8■□□□□ 0.44
CHFR-213ENST00000536843 VIPAS39Q9H9C1 493 aa17.8■□□□□ 0.44
CHFR-213ENST00000536843 CLIC4Q9Y696 253 aa17.8■□□□□ 0.44
CHFR-213ENST00000536843 CARMIL3Q8ND23 1372 aa17.8■□□□□ 0.44
CHFR-213ENST00000536843 PRR29P0C7W0 189 aa17.79■□□□□ 0.44
CHFR-213ENST00000536843 EVA1CP58658 441 aa17.79■□□□□ 0.44
CHFR-213ENST00000536843 RPAINQ86UA6 219 aa17.79■□□□□ 0.44
CHFR-213ENST00000536843 MICALL1Q8N3F8 863 aa17.79■□□□□ 0.44
CHFR-213ENST00000536843 NEUROD6Q96NK8 337 aa17.79■□□□□ 0.44
CHFR-213ENST00000536843 MRPL44Q9H9J2 332 aaKnown RBP17.79■□□□□ 0.44
CHFR-213ENST00000536843 PUF60Q9UHX1 559 aaKnown RBP17.79■□□□□ 0.44
CHFR-213ENST00000536843 CCDC196A0A1B0GTZ2 297 aa17.79■□□□□ 0.44
CHFR-213ENST00000536843 ZNF609O15014 1411 aa17.79■□□□□ 0.44
CHFR-213ENST00000536843 PFKFB1P16118 471 aa17.79■□□□□ 0.44
CHFR-213ENST00000536843 VSNL1P62760 191 aa17.79■□□□□ 0.44
CHFR-213ENST00000536843 GUCY1B3Q02153 619 aa17.79■□□□□ 0.44
CHFR-213ENST00000536843 KARSQ15046 597 aaKnown RBP17.79■□□□□ 0.44
CHFR-213ENST00000536843 WWC2Q6AWC2 1192 aa17.79■□□□□ 0.44
CHFR-213ENST00000536843 ANKRD20A12PQ8NF67 263 aa17.79■□□□□ 0.44
CHFR-213ENST00000536843 ZNF594Q96JF6 807 aaPredicted RBP17.79■□□□□ 0.44
CHFR-213ENST00000536843 LRRC2Q9BYS8 371 aa17.79■□□□□ 0.44
CHFR-213ENST00000536843 CCDC175P0C221 793 aa17.78■□□□□ 0.44
CHFR-213ENST00000536843 MAP2K2P36507 400 aa17.78■□□□□ 0.44
CHFR-213ENST00000536843 ATP6V1AP38606 617 aa17.78■□□□□ 0.44
CHFR-213ENST00000536843 TIMM10P62072 90 aa17.78■□□□□ 0.44
CHFR-213ENST00000536843 DHX32Q7L7V1 743 aaKnown RBP17.78■□□□□ 0.44
CHFR-213ENST00000536843 AFAP1L1Q8TED9 768 aa17.78■□□□□ 0.44
CHFR-213ENST00000536843 ERLIN2O94905 339 aa17.78■□□□□ 0.44
CHFR-213ENST00000536843 MYCNP04198 464 aaPredicted RBP17.78■□□□□ 0.44
CHFR-213ENST00000536843 SPECC1LQ69YQ0 1117 aa17.78■□□□□ 0.44
CHFR-213ENST00000536843 BANK1Q8NDB2 785 aa17.78■□□□□ 0.44
CHFR-213ENST00000536843 FANCLQ9NW38 375 aa17.78■□□□□ 0.44
CHFR-213ENST00000536843 RFX7Q2KHR2 1363 aa17.78■□□□□ 0.44
CHFR-213ENST00000536843 RNF40O75150 1001 aa17.77■□□□□ 0.44
CHFR-213ENST00000536843 PHACTR2O75167 634 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms