RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 SH3BP5LQ7L8J4 393 aa21.85■■□□□ 1.09
TNFRSF1A-209ENST00000536717 MS4A4AQ96JQ5 239 aa21.85■■□□□ 1.09
TNFRSF1A-209ENST00000536717 R3HDMLQ9H3Y0 253 aa21.85■■□□□ 1.09
TNFRSF1A-209ENST00000536717 TESPA1A2RU30 521 aaPredicted RBP21.85■■□□□ 1.09
TNFRSF1A-209ENST00000536717 SPDYE5A6NIY4 337 aa21.85■■□□□ 1.09
TNFRSF1A-209ENST00000536717 INPP5BP32019 993 aa21.85■■□□□ 1.09
TNFRSF1A-209ENST00000536717 KIF1BPQ96EK5 621 aa21.85■■□□□ 1.09
TNFRSF1A-209ENST00000536717 ZNF112Q9UJU3 913 aa21.85■■□□□ 1.09
TNFRSF1A-209ENST00000536717 DDTLA6NHG4 134 aaPredicted RBP21.84■■□□□ 1.09
TNFRSF1A-209ENST00000536717 APBB1O00213 710 aa21.84■■□□□ 1.09
TNFRSF1A-209ENST00000536717 ALDH1A1P00352 501 aa21.84■■□□□ 1.09
TNFRSF1A-209ENST00000536717 PICALMQ13492 652 aa21.84■■□□□ 1.09
TNFRSF1A-209ENST00000536717 OTUD5Q96G74 571 aa21.84■■□□□ 1.09
TNFRSF1A-209ENST00000536717 ABHD8Q96I13 439 aa21.84■■□□□ 1.09
TNFRSF1A-209ENST00000536717 PTPN18Q99952 460 aa21.84■■□□□ 1.09
TNFRSF1A-209ENST00000536717 PIH1D3Q9NQM4 214 aaKnown RBP21.84■■□□□ 1.09
TNFRSF1A-209ENST00000536717 NAA16Q6N069 864 aaPredicted RBP21.83■■□□□ 1.09
TNFRSF1A-209ENST00000536717 CRBNQ96SW2 442 aa21.83■■□□□ 1.09
TNFRSF1A-209ENST00000536717 MCOLN1Q9GZU1 580 aa21.83■■□□□ 1.09
TNFRSF1A-209ENST00000536717 NDUFB9Q9Y6M9 179 aa21.83■■□□□ 1.09
TNFRSF1A-209ENST00000536717 SIPA1L1O43166 1804 aa21.82■■□□□ 1.08
TNFRSF1A-209ENST00000536717 NPM3O75607 178 aaKnown RBP21.82■■□□□ 1.08
TNFRSF1A-209ENST00000536717 DGKZQ13574 1117 aa21.82■■□□□ 1.08
TNFRSF1A-209ENST00000536717 NOM1Q5C9Z4 860 aaKnown RBP21.82■■□□□ 1.08
TNFRSF1A-209ENST00000536717 ADGRA1Q86SQ6 560 aa21.82■■□□□ 1.08
TNFRSF1A-209ENST00000536717 ERO1BQ86YB8 467 aa21.82■■□□□ 1.08
TNFRSF1A-209ENST00000536717 CLASRPQ8N2M8 674 aaKnown RBP21.82■■□□□ 1.08
TNFRSF1A-209ENST00000536717 ZNF296Q8WUU4 475 aaPredicted RBP21.82■■□□□ 1.08
TNFRSF1A-209ENST00000536717 DOCK1Q14185 1865 aa21.82■■□□□ 1.08
TNFRSF1A-209ENST00000536717 GPR25O00155 361 aa21.81■■□□□ 1.08
TNFRSF1A-209ENST00000536717 RAB11FIP3O75154 756 aa21.81■■□□□ 1.08
TNFRSF1A-209ENST00000536717 MAP4K4O95819 1239 aaPredicted RBP21.81■■□□□ 1.08
TNFRSF1A-209ENST00000536717 SLURP2P0DP57 97 aa21.81■■□□□ 1.08
TNFRSF1A-209ENST00000536717 MAP3K10Q02779 954 aa21.81■■□□□ 1.08
TNFRSF1A-209ENST00000536717 ZSCAN29Q8IWY8 852 aaPredicted RBP21.81■■□□□ 1.08
TNFRSF1A-209ENST00000536717 PTPRFP10586 1907 aa21.81■■□□□ 1.08
TNFRSF1A-209ENST00000536717 PHIPQ8WWQ0 1821 aa21.81■■□□□ 1.08
TNFRSF1A-209ENST00000536717 IRF6O14896 467 aa21.8■■□□□ 1.08
TNFRSF1A-209ENST00000536717 IGSF3O75054 1194 aa21.8■■□□□ 1.08
TNFRSF1A-209ENST00000536717 GTF2A2P52657 109 aa21.8■■□□□ 1.08
TNFRSF1A-209ENST00000536717 BRI3BPQ8WY22 251 aa21.8■■□□□ 1.08
TNFRSF1A-209ENST00000536717 ANTXR1Q9H6X2 564 aa21.8■■□□□ 1.08
TNFRSF1A-209ENST00000536717 AATFQ9NY61 560 aaKnown RBP eCLIP21.8■■□□□ 1.08
TNFRSF1A-209ENST00000536717 ATAD5Q96QE3 1844 aa21.8■■□□□ 1.08
TNFRSF1A-209ENST00000536717 MYH1P12882 1939 aa21.8■■□□□ 1.08
TNFRSF1A-209ENST00000536717 SH3RF3Q8TEJ3 882 aaPredicted RBP21.8■■□□□ 1.08
TNFRSF1A-209ENST00000536717 COL2A1P02458 1487 aaPredicted RBP21.79■■□□□ 1.08
TNFRSF1A-209ENST00000536717 CCL15-CCL14A0A0B4J2E2 113 aa21.79■■□□□ 1.08
TNFRSF1A-209ENST00000536717 PHF20L1A8MW92 1017 aa21.79■■□□□ 1.08
TNFRSF1A-209ENST00000536717 PPP4CP60510 307 aa21.79■■□□□ 1.08
TNFRSF1A-209ENST00000536717 IRX6P78412 446 aaPredicted RBP21.79■■□□□ 1.08
TNFRSF1A-209ENST00000536717 PPIL2Q13356 520 aa21.79■■□□□ 1.08
TNFRSF1A-209ENST00000536717 CCL15Q16663 113 aa21.79■■□□□ 1.08
TNFRSF1A-209ENST00000536717 NOL9Q5SY16 702 aaKnown RBP21.79■■□□□ 1.08
TNFRSF1A-209ENST00000536717 OTUD7BQ6GQQ9 843 aa21.79■■□□□ 1.08
TNFRSF1A-209ENST00000536717 TEX11Q8IYF3 940 aa21.79■■□□□ 1.08
TNFRSF1A-209ENST00000536717 IDH1O75874 414 aaKnown RBP21.78■■□□□ 1.08
TNFRSF1A-209ENST00000536717 PPATQ06203 517 aa21.78■■□□□ 1.08
TNFRSF1A-209ENST00000536717 NOL10Q9BSC4 688 aaKnown RBP21.78■■□□□ 1.08
TNFRSF1A-209ENST00000536717 OSBPL5Q9H0X9 879 aaPredicted RBP21.78■■□□□ 1.08
TNFRSF1A-209ENST00000536717 MYH7P12883 1935 aa21.78■■□□□ 1.08
TNFRSF1A-209ENST00000536717 BAG3O95817 575 aa21.77■■□□□ 1.08
TNFRSF1A-209ENST00000536717 IFIT2P09913 472 aaKnown RBP21.77■■□□□ 1.08
TNFRSF1A-209ENST00000536717 CRHR2Q13324 411 aa21.77■■□□□ 1.08
TNFRSF1A-209ENST00000536717 CTU1Q7Z7A3 348 aaKnown RBP21.77■■□□□ 1.08
TNFRSF1A-209ENST00000536717 BCL11AQ9H165 835 aa21.77■■□□□ 1.08
TNFRSF1A-209ENST00000536717 FAM43AQ8N2R8 423 aa21.76■■□□□ 1.07
TNFRSF1A-209ENST00000536717 FKTNO75072 461 aa21.75■■□□□ 1.07
TNFRSF1A-209ENST00000536717 PLCG2P16885 1265 aa21.75■■□□□ 1.07
TNFRSF1A-209ENST00000536717 CYP7A1P22680 504 aa21.75■■□□□ 1.07
TNFRSF1A-209ENST00000536717 AAMPQ13685 434 aa21.75■■□□□ 1.07
TNFRSF1A-209ENST00000536717 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.75■■□□□ 1.07
TNFRSF1A-209ENST00000536717 TBC1D12O60347 775 aa21.75■■□□□ 1.07
TNFRSF1A-209ENST00000536717 NEFLP07196 543 aa21.75■■□□□ 1.07
TNFRSF1A-209ENST00000536717 CETPP11597 493 aa21.75■■□□□ 1.07
TNFRSF1A-209ENST00000536717 SNAPC2Q13487 334 aa21.75■■□□□ 1.07
TNFRSF1A-209ENST00000536717 SCYL3Q8IZE3 742 aa21.75■■□□□ 1.07
TNFRSF1A-209ENST00000536717 MAGEB6Q8N7X4 407 aa21.75■■□□□ 1.07
TNFRSF1A-209ENST00000536717 EXOC6Q8TAG9 804 aa21.75■■□□□ 1.07
TNFRSF1A-209ENST00000536717 KCNH4Q9UQ05 1017 aa21.75■■□□□ 1.07
TNFRSF1A-209ENST00000536717 FAM196BA6NMK8 535 aa21.74■■□□□ 1.07
TNFRSF1A-209ENST00000536717 DYNLL1P63167 89 aaKnown RBP21.74■■□□□ 1.07
TNFRSF1A-209ENST00000536717 MAP3K12Q12852 859 aa21.74■■□□□ 1.07
TNFRSF1A-209ENST00000536717 TGFBRAP1Q8WUH2 860 aa21.74■■□□□ 1.07
TNFRSF1A-209ENST00000536717 LRRCC1Q9C099 1032 aa21.74■■□□□ 1.07
TNFRSF1A-209ENST00000536717 HTTP42858 3142 aa21.74■■□□□ 1.07
TNFRSF1A-209ENST00000536717 FLT1P17948 1338 aa21.73■■□□□ 1.07
TNFRSF1A-209ENST00000536717 BTBD19C9JJ37 291 aa21.72■■□□□ 1.07
TNFRSF1A-209ENST00000536717 SMARCA5O60264 1052 aaPredicted RBP21.72■■□□□ 1.07
TNFRSF1A-209ENST00000536717 TTF1Q15361 905 aaPredicted RBP21.72■■□□□ 1.07
TNFRSF1A-209ENST00000536717 TAF1CQ15572 869 aaPredicted RBP21.72■■□□□ 1.07
TNFRSF1A-209ENST00000536717 MAPKAPK5Q8IW41 473 aa21.72■■□□□ 1.07
TNFRSF1A-209ENST00000536717 MIGA1Q8NAN2 632 aa21.72■■□□□ 1.07
TNFRSF1A-209ENST00000536717 DCTPP1Q9H773 170 aa21.72■■□□□ 1.07
TNFRSF1A-209ENST00000536717 PCDHB15Q9Y5E8 787 aa21.72■■□□□ 1.07
TNFRSF1A-209ENST00000536717 CENPFP49454 3210 aa21.72■■□□□ 1.07
TNFRSF1A-209ENST00000536717 CTNND1O60716 968 aaKnown RBP21.71■■□□□ 1.07
TNFRSF1A-209ENST00000536717 PTPRAP18433 802 aa21.71■■□□□ 1.07
TNFRSF1A-209ENST00000536717 TMED8Q6PL24 325 aaPredicted RBP21.71■■□□□ 1.07
TNFRSF1A-209ENST00000536717 EDC3Q96F86 508 aaKnown RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms