RNA–Protein interactions for RNA: ENST00000536661.1

UBC-204, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-204ENST00000536661 PTPRFP10586 1907 aa18.34■□□□□ 0.53
UBC-204ENST00000536661 CCL15-CCL14A0A0B4J2E2 113 aa18.34■□□□□ 0.53
UBC-204ENST00000536661 FKTNO75072 461 aa18.34■□□□□ 0.53
UBC-204ENST00000536661 GTF2A2P52657 109 aa18.34■□□□□ 0.53
UBC-204ENST00000536661 GSTO1P78417 241 aa18.34■□□□□ 0.53
UBC-204ENST00000536661 CRHR2Q13324 411 aa18.34■□□□□ 0.53
UBC-204ENST00000536661 PICALMQ13492 652 aa18.34■□□□□ 0.53
UBC-204ENST00000536661 CCL15Q16663 113 aa18.34■□□□□ 0.53
UBC-204ENST00000536661 SH3BP5LQ7L8J4 393 aa18.34■□□□□ 0.53
UBC-204ENST00000536661 ZNF512BQ96KM6 892 aaPredicted RBP18.34■□□□□ 0.53
UBC-204ENST00000536661 LRP2BPQ9P2M1 347 aa18.34■□□□□ 0.53
UBC-204ENST00000536661 SIPA1L1O43166 1804 aa18.34■□□□□ 0.53
UBC-204ENST00000536661 PHIPQ8WWQ0 1821 aa18.34■□□□□ 0.53
UBC-204ENST00000536661 CYP2E1P05181 493 aaPredicted RBP18.33■□□□□ 0.52
UBC-204ENST00000536661 LDHCP07864 332 aa18.33■□□□□ 0.52
UBC-204ENST00000536661 OTUD7BQ6GQQ9 843 aa18.33■□□□□ 0.52
UBC-204ENST00000536661 ERC1Q8IUD2 1116 aa18.33■□□□□ 0.52
UBC-204ENST00000536661 DDTLA6NHG4 134 aaPredicted RBP18.32■□□□□ 0.52
UBC-204ENST00000536661 IRF6O14896 467 aa18.32■□□□□ 0.52
UBC-204ENST00000536661 ZAP70P43403 619 aa18.32■□□□□ 0.52
UBC-204ENST00000536661 PPIL2Q13356 520 aa18.32■□□□□ 0.52
UBC-204ENST00000536661 C20orf194Q5TEA3 1177 aa18.32■□□□□ 0.52
UBC-204ENST00000536661 ZSCAN29Q8IWY8 852 aaPredicted RBP18.32■□□□□ 0.52
UBC-204ENST00000536661 SIRT2Q8IXJ6 389 aa18.32■□□□□ 0.52
UBC-204ENST00000536661 TNRC18O15417 2968 aaPredicted RBP18.32■□□□□ 0.52
UBC-204ENST00000536661 HTTP42858 3142 aa18.31■□□□□ 0.52
UBC-204ENST00000536661 SLURP2P0DP57 97 aa18.31■□□□□ 0.52
UBC-204ENST00000536661 NOL9Q5SY16 702 aaKnown RBP18.31■□□□□ 0.52
UBC-204ENST00000536661 NAA16Q6N069 864 aaPredicted RBP18.31■□□□□ 0.52
UBC-204ENST00000536661 AACSQ86V21 672 aa18.31■□□□□ 0.52
UBC-204ENST00000536661 RPAP2Q8IXW5 612 aaPredicted RBP18.31■□□□□ 0.52
UBC-204ENST00000536661 FAM43AQ8N2R8 423 aa18.31■□□□□ 0.52
UBC-204ENST00000536661 IL1RAPL2Q9NP60 686 aa18.31■□□□□ 0.52
UBC-204ENST00000536661 PIH1D3Q9NQM4 214 aaKnown RBP18.31■□□□□ 0.52
UBC-204ENST00000536661 HPS5Q9UPZ3 1129 aa18.31■□□□□ 0.52
UBC-204ENST00000536661 COL2A1P02458 1487 aaPredicted RBP18.31■□□□□ 0.52
UBC-204ENST00000536661 ZSWIM8A7E2V4 1837 aa18.3■□□□□ 0.52
UBC-204ENST00000536661 MLLT1Q03111 559 aaPredicted RBP18.3■□□□□ 0.52
UBC-204ENST00000536661 PPATQ06203 517 aa18.3■□□□□ 0.52
UBC-204ENST00000536661 HSP90AB4PQ58FF6 505 aa18.3■□□□□ 0.52
UBC-204ENST00000536661 RHPN1Q8TCX5 695 aa18.3■□□□□ 0.52
UBC-204ENST00000536661 PHF20L1A8MW92 1017 aa18.29■□□□□ 0.52
UBC-204ENST00000536661 HMMRO75330 724 aa18.29■□□□□ 0.52
UBC-204ENST00000536661 NPM3O75607 178 aaKnown RBP18.29■□□□□ 0.52
UBC-204ENST00000536661 MAP4K4O95819 1239 aaPredicted RBP18.29■□□□□ 0.52
UBC-204ENST00000536661 CETPP11597 493 aa18.29■□□□□ 0.52
UBC-204ENST00000536661 MAP3K10Q02779 954 aa18.29■□□□□ 0.52
UBC-204ENST00000536661 SNAPC2Q13487 334 aa18.29■□□□□ 0.52
UBC-204ENST00000536661 PDE3AQ14432 1141 aa18.29■□□□□ 0.52
UBC-204ENST00000536661 TAF1CQ15572 869 aaPredicted RBP18.29■□□□□ 0.52
UBC-204ENST00000536661 PKN2Q16513 984 aaKnown RBP18.29■□□□□ 0.52
UBC-204ENST00000536661 ADGRA1Q86SQ6 560 aa18.29■□□□□ 0.52
UBC-204ENST00000536661 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.29■□□□□ 0.52
UBC-204ENST00000536661 SH3RF3Q8TEJ3 882 aaPredicted RBP18.29■□□□□ 0.52
UBC-204ENST00000536661 AATFQ9NY61 560 aaKnown RBP eCLIP18.29■□□□□ 0.529e-7■■□□□ 13.5
UBC-204ENST00000536661 NDUFB9Q9Y6M9 179 aa18.29■□□□□ 0.52
UBC-204ENST00000536661 MYH1P12882 1939 aa18.29■□□□□ 0.52
UBC-204ENST00000536661 APBB1O00213 710 aa18.28■□□□□ 0.52
UBC-204ENST00000536661 SOX10P56693 466 aa18.28■□□□□ 0.52
UBC-204ENST00000536661 TEX11Q8IYF3 940 aa18.28■□□□□ 0.52
UBC-204ENST00000536661 NOL10Q9BSC4 688 aaKnown RBP18.28■□□□□ 0.52
UBC-204ENST00000536661 OSBPL5Q9H0X9 879 aaPredicted RBP18.28■□□□□ 0.52
UBC-204ENST00000536661 CHMP4BQ9H444 224 aaKnown RBP18.28■□□□□ 0.52
UBC-204ENST00000536661 BTBD19C9JJ37 291 aa18.27■□□□□ 0.52
UBC-204ENST00000536661 CAP1Q01518 475 aa18.27■□□□□ 0.52
UBC-204ENST00000536661 SCYL3Q8IZE3 742 aa18.27■□□□□ 0.52
UBC-204ENST00000536661 KIF1BPQ96EK5 621 aa18.27■□□□□ 0.52
UBC-204ENST00000536661 KCNH4Q9UQ05 1017 aa18.27■□□□□ 0.52
UBC-204ENST00000536661 FAM196BA6NMK8 535 aa18.26■□□□□ 0.51
UBC-204ENST00000536661 FBXO46Q6PJ61 603 aaPredicted RBP18.26■□□□□ 0.51
UBC-204ENST00000536661 CD99L2Q8TCZ2 262 aa18.26■□□□□ 0.51
UBC-204ENST00000536661 ERO1AQ96HE7 468 aa18.26■□□□□ 0.51
UBC-204ENST00000536661 ZFYVE28Q9HCC9 887 aa18.26■□□□□ 0.51
UBC-204ENST00000536661 ZCCHC17Q9NP64 241 aaKnown RBP18.26■□□□□ 0.51
UBC-204ENST00000536661 TRIM17Q9Y577 477 aa18.26■□□□□ 0.51
UBC-204ENST00000536661 MYH7P12883 1935 aa18.25■□□□□ 0.51
UBC-204ENST00000536661 IGSF3O75054 1194 aa18.25■□□□□ 0.51
UBC-204ENST00000536661 IDH1O75874 414 aaKnown RBP18.25■□□□□ 0.51
UBC-204ENST00000536661 BAG3O95817 575 aa18.25■□□□□ 0.51
UBC-204ENST00000536661 PPP4CP60510 307 aa18.25■□□□□ 0.51
UBC-204ENST00000536661 SP3Q02447 781 aa18.25■□□□□ 0.51
UBC-204ENST00000536661 OTOP1Q7RTM1 612 aa18.25■□□□□ 0.51
UBC-204ENST00000536661 CLASRPQ8N2M8 674 aaKnown RBP18.25■□□□□ 0.51
UBC-204ENST00000536661 ANTXR1Q9H6X2 564 aa18.25■□□□□ 0.51
UBC-204ENST00000536661 NAV1Q8NEY1 1877 aa18.24■□□□□ 0.51
UBC-204ENST00000536661 DDX60LQ5H9U9 1706 aaKnown RBP18.24■□□□□ 0.51
UBC-204ENST00000536661 TBC1D12O60347 775 aa18.24■□□□□ 0.51
UBC-204ENST00000536661 PLCG2P16885 1265 aa18.24■□□□□ 0.51
UBC-204ENST00000536661 PTPRAP18433 802 aa18.24■□□□□ 0.51
UBC-204ENST00000536661 CYP7A1P22680 504 aa18.24■□□□□ 0.51
UBC-204ENST00000536661 MOGSQ13724 837 aa18.24■□□□□ 0.51
UBC-204ENST00000536661 PICK1Q9NRD5 415 aa18.24■□□□□ 0.51
UBC-204ENST00000536661 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.24■□□□□ 0.51
UBC-204ENST00000536661 LOC285556D6RIA3 1793 aa18.24■□□□□ 0.51
UBC-204ENST00000536661 FLT1P17948 1338 aa18.23■□□□□ 0.51
UBC-204ENST00000536661 CENPFP49454 3210 aa18.23■□□□□ 0.51
UBC-204ENST00000536661 CTNND1O60716 968 aaKnown RBP18.23■□□□□ 0.51
UBC-204ENST00000536661 RAB11FIP3O75154 756 aa18.23■□□□□ 0.51
UBC-204ENST00000536661 DYNLL1P63167 89 aaKnown RBP18.23■□□□□ 0.51
UBC-204ENST00000536661 ANKRD23Q86SG2 305 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms