RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 ZNF112Q9UJU3 913 aa17.55■□□□□ 0.4
RTN3P1-201ENST00000536295 TRIM17Q9Y577 477 aa17.55■□□□□ 0.4
RTN3P1-201ENST00000536295 RFX7Q2KHR2 1363 aa17.54■□□□□ 0.4
RTN3P1-201ENST00000536295 DDTLA6NHG4 134 aaPredicted RBP17.54■□□□□ 0.4
RTN3P1-201ENST00000536295 LDHCP07864 332 aa17.54■□□□□ 0.4
RTN3P1-201ENST00000536295 RGS19P49795 217 aa17.54■□□□□ 0.4
RTN3P1-201ENST00000536295 PPATQ06203 517 aa17.54■□□□□ 0.4
RTN3P1-201ENST00000536295 FBXO46Q6PJ61 603 aaPredicted RBP17.54■□□□□ 0.4
RTN3P1-201ENST00000536295 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.54■□□□□ 0.4
RTN3P1-201ENST00000536295 ERO1AQ96HE7 468 aa17.54■□□□□ 0.4
RTN3P1-201ENST00000536295 CCDC8Q9H0W5 538 aaPredicted RBP17.54■□□□□ 0.4
RTN3P1-201ENST00000536295 ZFYVE28Q9HCC9 887 aa17.54■□□□□ 0.4
RTN3P1-201ENST00000536295 TLR7Q9NYK1 1049 aaKnown RBP17.54■□□□□ 0.4
RTN3P1-201ENST00000536295 EXOC6BQ9Y2D4 811 aa17.54■□□□□ 0.4
RTN3P1-201ENST00000536295 BTBD19C9JJ37 291 aa17.53■□□□□ 0.4
RTN3P1-201ENST00000536295 SLURP2P0DP57 97 aa17.53■□□□□ 0.4
RTN3P1-201ENST00000536295 MS4A1P11836 297 aa17.53■□□□□ 0.4
RTN3P1-201ENST00000536295 RHBDL3P58872 404 aa17.53■□□□□ 0.4
RTN3P1-201ENST00000536295 SP3Q02447 781 aa17.53■□□□□ 0.4
RTN3P1-201ENST00000536295 OTOP1Q7RTM1 612 aa17.53■□□□□ 0.4
RTN3P1-201ENST00000536295 DBNLQ9UJU6 430 aaKnown RBP17.53■□□□□ 0.4
RTN3P1-201ENST00000536295 ATRNL1Q5VV63 1379 aa17.53■□□□□ 0.4
RTN3P1-201ENST00000536295 NOL9Q5SY16 702 aaKnown RBP17.52■□□□□ 0.4
RTN3P1-201ENST00000536295 EAF2Q96CJ1 260 aaPredicted RBP17.52■□□□□ 0.4
RTN3P1-201ENST00000536295 RCAN3Q9UKA8 241 aa17.52■□□□□ 0.4
RTN3P1-201ENST00000536295 COG6Q9Y2V7 657 aa17.52■□□□□ 0.4
RTN3P1-201ENST00000536295 DOCK2Q92608 1830 aa17.51■□□□□ 0.39
RTN3P1-201ENST00000536295 CYP2E1P05181 493 aaPredicted RBP17.51■□□□□ 0.39
RTN3P1-201ENST00000536295 ZAP70P43403 619 aa17.51■□□□□ 0.39
RTN3P1-201ENST00000536295 NAA16Q6N069 864 aaPredicted RBP17.51■□□□□ 0.39
RTN3P1-201ENST00000536295 NOL10Q9BSC4 688 aaKnown RBP17.51■□□□□ 0.39
RTN3P1-201ENST00000536295 PHF20L1A8MW92 1017 aa17.5■□□□□ 0.39
RTN3P1-201ENST00000536295 TEX11Q8IYF3 940 aa17.5■□□□□ 0.39
RTN3P1-201ENST00000536295 SH3RF3Q8TEJ3 882 aaPredicted RBP17.5■□□□□ 0.39
RTN3P1-201ENST00000536295 EFCC1Q9HA90 598 aa17.5■□□□□ 0.39
RTN3P1-201ENST00000536295 PICK1Q9NRD5 415 aa17.5■□□□□ 0.39
RTN3P1-201ENST00000536295 FAM196BA6NMK8 535 aa17.49■□□□□ 0.39
RTN3P1-201ENST00000536295 APBB1O00213 710 aa17.49■□□□□ 0.39
RTN3P1-201ENST00000536295 CAP1Q01518 475 aa17.49■□□□□ 0.39
RTN3P1-201ENST00000536295 AACSQ86V21 672 aa17.49■□□□□ 0.39
RTN3P1-201ENST00000536295 ERC1Q8IUD2 1116 aa17.49■□□□□ 0.39
RTN3P1-201ENST00000536295 SCYL3Q8IZE3 742 aa17.49■□□□□ 0.39
RTN3P1-201ENST00000536295 ZNF512BQ96KM6 892 aaPredicted RBP17.49■□□□□ 0.39
RTN3P1-201ENST00000536295 BCL11AQ9H165 835 aa17.49■□□□□ 0.39
RTN3P1-201ENST00000536295 PIH1D3Q9NQM4 214 aaKnown RBP17.49■□□□□ 0.39
RTN3P1-201ENST00000536295 AATFQ9NY61 560 aaKnown RBP eCLIP17.49■□□□□ 0.39
RTN3P1-201ENST00000536295 DDX19BQ9UMR2 479 aa17.49■□□□□ 0.39
RTN3P1-201ENST00000536295 KCNH4Q9UQ05 1017 aa17.49■□□□□ 0.39
RTN3P1-201ENST00000536295 ZHX2Q9Y6X8 837 aa17.49■□□□□ 0.39
RTN3P1-201ENST00000536295 TLR2O60603 784 aa17.48■□□□□ 0.39
RTN3P1-201ENST00000536295 OSBPL5Q9H0X9 879 aaPredicted RBP17.48■□□□□ 0.39
RTN3P1-201ENST00000536295 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.48■□□□□ 0.39
RTN3P1-201ENST00000536295 IL1RAPL2Q9NP60 686 aa17.48■□□□□ 0.39
RTN3P1-201ENST00000536295 PTPN22Q9Y2R2 807 aa17.48■□□□□ 0.39
RTN3P1-201ENST00000536295 NDUFB9Q9Y6M9 179 aa17.48■□□□□ 0.39
RTN3P1-201ENST00000536295 PDHXO00330 501 aa17.47■□□□□ 0.39
RTN3P1-201ENST00000536295 NPM3O75607 178 aaKnown RBP17.47■□□□□ 0.39
RTN3P1-201ENST00000536295 ECM2O94769 699 aaPredicted RBP17.47■□□□□ 0.39
RTN3P1-201ENST00000536295 BAG3O95817 575 aa17.47■□□□□ 0.39
RTN3P1-201ENST00000536295 MAP4K4O95819 1239 aaPredicted RBP17.47■□□□□ 0.39
RTN3P1-201ENST00000536295 PTPRAP18433 802 aa17.47■□□□□ 0.39
RTN3P1-201ENST00000536295 MAP3K10Q02779 954 aa17.47■□□□□ 0.39
RTN3P1-201ENST00000536295 ANKRD23Q86SG2 305 aa17.47■□□□□ 0.39
RTN3P1-201ENST00000536295 ADGRA1Q86SQ6 560 aa17.47■□□□□ 0.39
RTN3P1-201ENST00000536295 ZCCHC17Q9NP64 241 aaKnown RBP17.47■□□□□ 0.39
RTN3P1-201ENST00000536295 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.47■□□□□ 0.39
RTN3P1-201ENST00000536295 MAST2Q6P0Q8 1798 aa17.46■□□□□ 0.39
RTN3P1-201ENST00000536295 CTNND1O60716 968 aaKnown RBP17.46■□□□□ 0.39
RTN3P1-201ENST00000536295 IDH1O75874 414 aaKnown RBP17.46■□□□□ 0.39
RTN3P1-201ENST00000536295 MOGSQ13724 837 aa17.46■□□□□ 0.39
RTN3P1-201ENST00000536295 HSP90AB4PQ58FF6 505 aa17.46■□□□□ 0.39
RTN3P1-201ENST00000536295 CCDC84Q86UT8 332 aaPredicted RBP17.46■□□□□ 0.39
RTN3P1-201ENST00000536295 RHPN1Q8TCX5 695 aa17.46■□□□□ 0.39
RTN3P1-201ENST00000536295 ZBTB40Q9NUA8 1239 aa17.46■□□□□ 0.39
RTN3P1-201ENST00000536295 CXCL11O14625 94 aa17.45■□□□□ 0.38
RTN3P1-201ENST00000536295 HMMRO75330 724 aa17.45■□□□□ 0.38
RTN3P1-201ENST00000536295 C20orf194Q5TEA3 1177 aa17.45■□□□□ 0.38
RTN3P1-201ENST00000536295 MAPKAPK5Q8IW41 473 aa17.45■□□□□ 0.38
RTN3P1-201ENST00000536295 RPAP2Q8IXW5 612 aaPredicted RBP17.45■□□□□ 0.38
RTN3P1-201ENST00000536295 TGFBRAP1Q8WUH2 860 aa17.45■□□□□ 0.38
RTN3P1-201ENST00000536295 ARHGAP39Q9C0H5 1083 aa17.45■□□□□ 0.38
RTN3P1-201ENST00000536295 CPA4Q9UI42 421 aa17.45■□□□□ 0.38
RTN3P1-201ENST00000536295 TRIM75PA6NK02 468 aa17.44■□□□□ 0.38
RTN3P1-201ENST00000536295 TBC1D12O60347 775 aa17.44■□□□□ 0.38
RTN3P1-201ENST00000536295 PLCG2P16885 1265 aa17.44■□□□□ 0.38
RTN3P1-201ENST00000536295 CYP7A1P22680 504 aa17.44■□□□□ 0.38
RTN3P1-201ENST00000536295 DYNLL1P63167 89 aaKnown RBP17.44■□□□□ 0.38
RTN3P1-201ENST00000536295 KIF22Q14807 665 aa17.44■□□□□ 0.38
RTN3P1-201ENST00000536295 ARHGEF6Q15052 776 aa17.44■□□□□ 0.38
RTN3P1-201ENST00000536295 GADL1Q6ZQY3 521 aa17.44■□□□□ 0.38
RTN3P1-201ENST00000536295 SIRT2Q8IXJ6 389 aa17.44■□□□□ 0.38
RTN3P1-201ENST00000536295 ANTXR1Q9H6X2 564 aa17.44■□□□□ 0.38
RTN3P1-201ENST00000536295 AFG3L2Q9Y4W6 797 aa17.44■□□□□ 0.38
RTN3P1-201ENST00000536295 MYO5AQ9Y4I1 1855 aaKnown RBP17.44■□□□□ 0.38
RTN3P1-201ENST00000536295 COL2A1P02458 1487 aaPredicted RBP17.44■□□□□ 0.38
RTN3P1-201ENST00000536295 A0A0G2JLL6 359 aaPredicted RBP17.43■□□□□ 0.38
RTN3P1-201ENST00000536295 PPP4CP60510 307 aa17.43■□□□□ 0.38
RTN3P1-201ENST00000536295 LACTBP83111 547 aaPredicted RBP17.43■□□□□ 0.38
RTN3P1-201ENST00000536295 GPAT2Q6NUI2 795 aa17.43■□□□□ 0.38
RTN3P1-201ENST00000536295 PRRT2Q7Z6L0 340 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms