RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 GSG1L2A8MUP6 293 aa18.51■□□□□ 0.55
CHMP1A-202ENST00000535997 CUTAO60888 179 aa18.51■□□□□ 0.55
CHMP1A-202ENST00000535997 IFNAR1P17181 557 aa18.51■□□□□ 0.55
CHMP1A-202ENST00000535997 INCENPQ9NQS7 918 aa18.51■□□□□ 0.55
CHMP1A-202ENST00000535997 SMC2O95347 1197 aa18.51■□□□□ 0.55
CHMP1A-202ENST00000535997 FMNL1O95466 1100 aaPredicted RBP18.51■□□□□ 0.55
CHMP1A-202ENST00000535997 CCDC150Q8NCX0 1101 aa18.51■□□□□ 0.55
CHMP1A-202ENST00000535997 USP27XA6NNY8 438 aa18.5■□□□□ 0.55
CHMP1A-202ENST00000535997 KIF2AO00139 706 aaPredicted RBP18.5■□□□□ 0.55
CHMP1A-202ENST00000535997 CTDSPL2Q05D32 466 aa18.5■□□□□ 0.55
CHMP1A-202ENST00000535997 PPP4R3BQ5MIZ7 849 aa18.5■□□□□ 0.55
CHMP1A-202ENST00000535997 SUSD4Q5VX71 490 aa18.5■□□□□ 0.55
CHMP1A-202ENST00000535997 ELOA2Q8IYF1 753 aaPredicted RBP18.5■□□□□ 0.55
CHMP1A-202ENST00000535997 TMTC2Q8N394 836 aa18.5■□□□□ 0.55
CHMP1A-202ENST00000535997 ZMYND15Q9H091 742 aa18.5■□□□□ 0.55
CHMP1A-202ENST00000535997 ARMT1Q9H993 441 aa18.5■□□□□ 0.55
CHMP1A-202ENST00000535997 PNPLA7Q6ZV29 1317 aa18.5■□□□□ 0.55
CHMP1A-202ENST00000535997 NID2Q14112 1375 aa18.5■□□□□ 0.55
CHMP1A-202ENST00000535997 SART3Q15020 963 aaKnown RBP18.49■□□□□ 0.55
CHMP1A-202ENST00000535997 UTP14AQ9BVJ6 771 aaKnown RBP18.49■□□□□ 0.55
CHMP1A-202ENST00000535997 SLC26A6Q9BXS9 759 aa18.49■□□□□ 0.55
CHMP1A-202ENST00000535997 LRP5O75197 1615 aa18.49■□□□□ 0.55
CHMP1A-202ENST00000535997 NHSL1Q5SYE7 1610 aa18.49■□□□□ 0.55
CHMP1A-202ENST00000535997 KCNJ6P48051 423 aa18.49■□□□□ 0.55
CHMP1A-202ENST00000535997 STAG1Q8WVM7 1258 aa18.49■□□□□ 0.55
CHMP1A-202ENST00000535997 MYL10Q9BUA6 226 aa18.49■□□□□ 0.55
CHMP1A-202ENST00000535997 ARAP2Q8WZ64 1704 aa18.49■□□□□ 0.55
CHMP1A-202ENST00000535997 NCBP1Q09161 790 aaKnown RBP18.48■□□□□ 0.55
CHMP1A-202ENST00000535997 SAFBQ15424 915 aaKnown RBP eCLIP18.48■□□□□ 0.55
CHMP1A-202ENST00000535997 NOSTRINQ8IVI9 506 aa18.48■□□□□ 0.55
CHMP1A-202ENST00000535997 ZNF592Q92610 1267 aa18.48■□□□□ 0.55
CHMP1A-202ENST00000535997 ARID3AQ99856 593 aa18.48■□□□□ 0.55
CHMP1A-202ENST00000535997 STRCQ7RTU9 1775 aa18.48■□□□□ 0.55
CHMP1A-202ENST00000535997 MYO1BO43795 1136 aa18.48■□□□□ 0.55
CHMP1A-202ENST00000535997 NRDCO43847 1150 aa18.48■□□□□ 0.55
CHMP1A-202ENST00000535997 SFPQP23246 707 aaKnown RBP eCLIP18.48■□□□□ 0.55
CHMP1A-202ENST00000535997 CCDC152Q4G0S7 254 aa18.48■□□□□ 0.55
CHMP1A-202ENST00000535997 PARP10Q53GL7 1025 aa18.48■□□□□ 0.55
CHMP1A-202ENST00000535997 TMC6Q7Z403 805 aa18.48■□□□□ 0.55
CHMP1A-202ENST00000535997 TRIM22Q8IYM9 498 aa18.48■□□□□ 0.55
CHMP1A-202ENST00000535997 KCNH3Q9ULD8 1083 aa18.48■□□□□ 0.55
CHMP1A-202ENST00000535997 CCDC196A0A1B0GTZ2 297 aa18.47■□□□□ 0.55
CHMP1A-202ENST00000535997 RCAN1P53805 252 aa18.47■□□□□ 0.55
CHMP1A-202ENST00000535997 FANCCQ00597 558 aa18.47■□□□□ 0.55
CHMP1A-202ENST00000535997 INTS5Q6P9B9 1019 aaKnown RBP18.47■□□□□ 0.55
CHMP1A-202ENST00000535997 SMAP1Q8IYB5 467 aaPredicted RBP18.47■□□□□ 0.55
CHMP1A-202ENST00000535997 KRI1Q8N9T8 703 aaKnown RBP18.47■□□□□ 0.55
CHMP1A-202ENST00000535997 KIF18AQ8NI77 898 aa18.47■□□□□ 0.55
CHMP1A-202ENST00000535997 SEC31BQ9NQW1 1179 aa18.47■□□□□ 0.55
CHMP1A-202ENST00000535997 TRMT1Q9NXH9 659 aaKnown RBP18.47■□□□□ 0.55
CHMP1A-202ENST00000535997 TACC3Q9Y6A5 838 aa18.47■□□□□ 0.55
CHMP1A-202ENST00000535997 DOCK2Q92608 1830 aa18.47■□□□□ 0.55
CHMP1A-202ENST00000535997 SNAP23O00161 211 aa18.47■□□□□ 0.55
CHMP1A-202ENST00000535997 MMP1P03956 469 aa18.47■□□□□ 0.55
CHMP1A-202ENST00000535997 LMOD1P29536 600 aaPredicted RBP18.47■□□□□ 0.55
CHMP1A-202ENST00000535997 IGHMBP2P38935 993 aaKnown RBP18.47■□□□□ 0.55
CHMP1A-202ENST00000535997 TDO2P48775 406 aa18.47■□□□□ 0.55
CHMP1A-202ENST00000535997 BCAMP50895 628 aa18.47■□□□□ 0.55
CHMP1A-202ENST00000535997 ARMCX5Q6P1M9 558 aa18.47■□□□□ 0.55
CHMP1A-202ENST00000535997 KRBA2Q6ZNG9 492 aa18.47■□□□□ 0.55
CHMP1A-202ENST00000535997 CLIC6Q96NY7 704 aa18.47■□□□□ 0.55
CHMP1A-202ENST00000535997 HSD3B7Q9H2F3 369 aa18.47■□□□□ 0.55
CHMP1A-202ENST00000535997 FOXP1Q9H334 677 aaPredicted RBP18.47■□□□□ 0.55
CHMP1A-202ENST00000535997 RNF41Q9H4P4 317 aaPredicted RBP18.47■□□□□ 0.55
CHMP1A-202ENST00000535997 SLC4A4Q9Y6R1 1079 aa18.47■□□□□ 0.55
CHMP1A-202ENST00000535997 ERICH2A1L162 156 aa18.46■□□□□ 0.55
CHMP1A-202ENST00000535997 MYL5Q02045 173 aa18.46■□□□□ 0.55
CHMP1A-202ENST00000535997 WTAPQ15007 396 aa18.46■□□□□ 0.55
CHMP1A-202ENST00000535997 LONRF3Q496Y0 759 aa18.46■□□□□ 0.55
CHMP1A-202ENST00000535997 HOOK1Q9UJC3 728 aaKnown RBP18.46■□□□□ 0.55
CHMP1A-202ENST00000535997 CHD4Q14839 1912 aa18.46■□□□□ 0.55
CHMP1A-202ENST00000535997 PSDA5PKW4 1024 aaPredicted RBP18.46■□□□□ 0.54
CHMP1A-202ENST00000535997 BTBD18B2RXH4 712 aa18.46■□□□□ 0.54
CHMP1A-202ENST00000535997 PRKAB2O43741 272 aa18.46■□□□□ 0.54
CHMP1A-202ENST00000535997 TUBB4AP04350 444 aa18.46■□□□□ 0.54
CHMP1A-202ENST00000535997 PNOCQ13519 176 aa18.46■□□□□ 0.54
CHMP1A-202ENST00000535997 RTN1Q16799 776 aa18.46■□□□□ 0.54
CHMP1A-202ENST00000535997 RILPL1Q5EBL4 403 aa18.46■□□□□ 0.54
CHMP1A-202ENST00000535997 ISM2Q6H9L7 571 aa18.46■□□□□ 0.54
CHMP1A-202ENST00000535997 OLFM4Q6UX06 510 aa18.46■□□□□ 0.54
CHMP1A-202ENST00000535997 LCORLQ8N3X6 602 aa18.46■□□□□ 0.54
CHMP1A-202ENST00000535997 CNNM3Q8NE01 707 aa18.46■□□□□ 0.54
CHMP1A-202ENST00000535997 CCDC87Q9NVE4 849 aa18.46■□□□□ 0.54
CHMP1A-202ENST00000535997 RTL9Q8NET4 1388 aa18.45■□□□□ 0.54
CHMP1A-202ENST00000535997 CBFA2T2O43439 604 aa18.45■□□□□ 0.54
CHMP1A-202ENST00000535997 LRP2BPQ9P2M1 347 aa18.45■□□□□ 0.54
CHMP1A-202ENST00000535997 SLIT2O94813 1529 aa18.45■□□□□ 0.54
CHMP1A-202ENST00000535997 UBE2Q2LH0YL09 131 aa18.44■□□□□ 0.54
CHMP1A-202ENST00000535997 DEXIO95424 95 aa18.44■□□□□ 0.54
CHMP1A-202ENST00000535997 PPP2R5BQ15173 497 aa18.44■□□□□ 0.54
CHMP1A-202ENST00000535997 E4F1Q66K89 784 aaPredicted RBP18.44■□□□□ 0.54
CHMP1A-202ENST00000535997 METTL16Q86W50 562 aaKnown RBP18.44■□□□□ 0.54
CHMP1A-202ENST00000535997 FOXP4Q8IVH2 680 aaPredicted RBP18.44■□□□□ 0.54
CHMP1A-202ENST00000535997 DIS3L2Q8IYB7 885 aaKnown RBP18.44■□□□□ 0.54
CHMP1A-202ENST00000535997 CRACR2BQ8N4Y2 399 aaPredicted RBP18.44■□□□□ 0.54
CHMP1A-202ENST00000535997 FEZ1Q99689 392 aa18.44■□□□□ 0.54
CHMP1A-202ENST00000535997 GUCY1A2P33402 732 aa18.44■□□□□ 0.54
CHMP1A-202ENST00000535997 TOB1P50616 345 aaPredicted RBP18.44■□□□□ 0.54
CHMP1A-202ENST00000535997 UBASH3AP57075 661 aa18.44■□□□□ 0.54
CHMP1A-202ENST00000535997 RRP12Q5JTH9 1297 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms