RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 MIGA2Q7L4E1 593 aa26.94■■□□□ 1.9
VPS37C-202ENST00000535818 CLMNQ96JQ2 1002 aa26.94■■□□□ 1.9
VPS37C-202ENST00000535818 CSRNP1Q96S65 589 aa26.94■■□□□ 1.9
VPS37C-202ENST00000535818 ZIC5Q96T25 663 aa26.94■■□□□ 1.9
VPS37C-202ENST00000535818 ZNF341Q9BYN7 854 aa26.94■■□□□ 1.9
VPS37C-202ENST00000535818 WBP1LQ9NX94 342 aa26.94■■□□□ 1.9
VPS37C-202ENST00000535818 OTOFQ9HC10 1997 aa26.94■■□□□ 1.9
VPS37C-202ENST00000535818 MKRN3Q13064 507 aaKnown RBP26.93■■□□□ 1.9
VPS37C-202ENST00000535818 CERS3Q8IU89 383 aa26.93■■□□□ 1.9
VPS37C-202ENST00000535818 MIGA1Q8NAN2 632 aa26.93■■□□□ 1.9
VPS37C-202ENST00000535818 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.93■■□□□ 1.9
VPS37C-202ENST00000535818 CSADQ9Y600 493 aa26.93■■□□□ 1.9
VPS37C-202ENST00000535818 TTC41PQ6P2S7 1318 aa26.92■■□□□ 1.9
VPS37C-202ENST00000535818 NPM3O75607 178 aaKnown RBP26.92■■□□□ 1.9
VPS37C-202ENST00000535818 PDE6AP16499 860 aa26.92■■□□□ 1.9
VPS37C-202ENST00000535818 DYNLL1P63167 89 aaKnown RBP26.92■■□□□ 1.9
VPS37C-202ENST00000535818 MAP3K9P80192 1104 aa26.92■■□□□ 1.9
VPS37C-202ENST00000535818 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.92■■□□□ 1.9
VPS37C-202ENST00000535818 WRNIP1Q96S55 665 aa26.92■■□□□ 1.9
VPS37C-202ENST00000535818 ERC2O15083 957 aa26.91■■□□□ 1.9
VPS37C-202ENST00000535818 OTUD7AQ8TE49 926 aaPredicted RBP26.91■■□□□ 1.9
VPS37C-202ENST00000535818 TGFBRAP1Q8WUH2 860 aa26.91■■□□□ 1.9
VPS37C-202ENST00000535818 ZNF532Q9HCE3 1301 aa26.9■■□□□ 1.9
VPS37C-202ENST00000535818 DDTLA6NHG4 134 aaPredicted RBP26.9■■□□□ 1.9
VPS37C-202ENST00000535818 IGHDP01880 384 aa26.9■■□□□ 1.9
VPS37C-202ENST00000535818 MX1P20591 662 aa26.9■■□□□ 1.9
VPS37C-202ENST00000535818 SH3BP5LQ7L8J4 393 aa26.9■■□□□ 1.9
VPS37C-202ENST00000535818 OSBPL5Q9H0X9 879 aaPredicted RBP26.9■■□□□ 1.9
VPS37C-202ENST00000535818 ELP3Q9H9T3 547 aa26.9■■□□□ 1.9
VPS37C-202ENST00000535818 VGLL4Q14135 290 aa26.89■■□□□ 1.9
VPS37C-202ENST00000535818 SPRYD7Q5W111 196 aa26.89■■□□□ 1.9
VPS37C-202ENST00000535818 B4GALNT3Q6L9W6 998 aa26.89■■□□□ 1.9
VPS37C-202ENST00000535818 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.89■■□□□ 1.9
VPS37C-202ENST00000535818 MAPKAPK5Q8IW41 473 aa26.89■■□□□ 1.9
VPS37C-202ENST00000535818 SMC5Q8IY18 1101 aa26.89■■□□□ 1.9
VPS37C-202ENST00000535818 WNK4Q96J92 1243 aa26.89■■□□□ 1.9
VPS37C-202ENST00000535818 ATRNL1Q5VV63 1379 aa26.88■■□□□ 1.89
VPS37C-202ENST00000535818 MAGEB6P1A0A0J9YX57 407 aa26.88■■□□□ 1.89
VPS37C-202ENST00000535818 FOXN1O15353 648 aa26.88■■□□□ 1.89
VPS37C-202ENST00000535818 ZSCAN25Q6NSZ9 544 aa26.88■■□□□ 1.89
VPS37C-202ENST00000535818 REM2Q8IYK8 340 aaPredicted RBP26.88■■□□□ 1.89
VPS37C-202ENST00000535818 COL2A1P02458 1487 aaPredicted RBP26.87■■□□□ 1.89
VPS37C-202ENST00000535818 GLRX3O76003 335 aaKnown RBP26.87■■□□□ 1.89
VPS37C-202ENST00000535818 ZBTB48P10074 688 aaPredicted RBP26.87■■□□□ 1.89
VPS37C-202ENST00000535818 USP5P45974 858 aa26.87■■□□□ 1.89
VPS37C-202ENST00000535818 LNPKQ9C0E8 428 aa26.87■■□□□ 1.89
VPS37C-202ENST00000535818 CDK5RAP2Q96SN8 1893 aa26.87■■□□□ 1.89
VPS37C-202ENST00000535818 FLT1P17948 1338 aa26.87■■□□□ 1.89
VPS37C-202ENST00000535818 ADD2P35612 726 aa26.86■■□□□ 1.89
VPS37C-202ENST00000535818 ZKSCAN4Q969J2 545 aaPredicted RBP26.86■■□□□ 1.89
VPS37C-202ENST00000535818 OPTNQ96CV9 577 aa26.86■■□□□ 1.89
VPS37C-202ENST00000535818 MYH7P12883 1935 aa26.86■■□□□ 1.89
VPS37C-202ENST00000535818 FOCADQ5VW36 1801 aa26.86■■□□□ 1.89
VPS37C-202ENST00000535818 TCRBV5S4A2TA0A5A2 114 aa26.85■■□□□ 1.89
VPS37C-202ENST00000535818 CENPBP07199 599 aaPredicted RBP26.85■■□□□ 1.89
VPS37C-202ENST00000535818 CTCFP49711 727 aaPredicted RBP26.85■■□□□ 1.89
VPS37C-202ENST00000535818 SREBF2Q12772 1141 aa26.85■■□□□ 1.89
VPS37C-202ENST00000535818 PI4K2BQ8TCG2 481 aa26.85■■□□□ 1.89
VPS37C-202ENST00000535818 CA12O43570 354 aa26.84■■□□□ 1.89
VPS37C-202ENST00000535818 INPP5BP32019 993 aa26.84■■□□□ 1.89
VPS37C-202ENST00000535818 KBTBD3Q8NAB2 608 aa26.84■■□□□ 1.89
VPS37C-202ENST00000535818 RIOK1Q9BRS2 568 aaKnown RBP26.84■■□□□ 1.89
VPS37C-202ENST00000535818 DHX36Q9H2U1 1008 aaKnown RBP26.84■■□□□ 1.89
VPS37C-202ENST00000535818 SNCAIPQ9Y6H5 919 aa26.84■■□□□ 1.89
VPS37C-202ENST00000535818 CRNKL1Q9BZJ0 848 aaKnown RBP26.83■■□□□ 1.89
VPS37C-202ENST00000535818 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.83■■□□□ 1.89
VPS37C-202ENST00000535818 ZNF112Q9UJU3 913 aa26.83■■□□□ 1.89
VPS37C-202ENST00000535818 SALL3Q9BXA9 1300 aa26.83■■□□□ 1.89
VPS37C-202ENST00000535818 MANSC4A6NHS7 340 aaPredicted RBP26.82■■□□□ 1.88
VPS37C-202ENST00000535818 UBE3CQ15386 1083 aa26.82■■□□□ 1.88
VPS37C-202ENST00000535818 CHD1LQ86WJ1 897 aa26.82■■□□□ 1.88
VPS37C-202ENST00000535818 OTUD5Q96G74 571 aa26.82■■□□□ 1.88
VPS37C-202ENST00000535818 SAP30BPQ9UHR5 308 aaKnown RBP26.82■■□□□ 1.88
VPS37C-202ENST00000535818 GJA5P36382 358 aa26.81■■□□□ 1.88
VPS37C-202ENST00000535818 SLFNL1Q499Z3 407 aa26.81■■□□□ 1.88
VPS37C-202ENST00000535818 LCORLQ8N3X6 602 aa26.81■■□□□ 1.88
VPS37C-202ENST00000535818 CNKSR2Q8WXI2 1034 aa26.81■■□□□ 1.88
VPS37C-202ENST00000535818 PI4KBQ9UBF8 816 aa26.81■■□□□ 1.88
VPS37C-202ENST00000535818 PCNTO95613 3336 aa26.8■■□□□ 1.88
VPS37C-202ENST00000535818 SPDYE5A6NIY4 337 aa26.8■■□□□ 1.88
VPS37C-202ENST00000535818 FAM196BA6NMK8 535 aa26.8■■□□□ 1.88
VPS37C-202ENST00000535818 TBC1D12O60347 775 aa26.8■■□□□ 1.88
VPS37C-202ENST00000535818 MBD4O95243 580 aa26.8■■□□□ 1.88
VPS37C-202ENST00000535818 HLA-DOAP06340 250 aa26.8■■□□□ 1.88
VPS37C-202ENST00000535818 SLURP2P0DP57 97 aa26.8■■□□□ 1.88
VPS37C-202ENST00000535818 HSPA8P11142 646 aaKnown RBP26.8■■□□□ 1.88
VPS37C-202ENST00000535818 PDE1AP54750 535 aa26.8■■□□□ 1.88
VPS37C-202ENST00000535818 NUCB1Q02818 461 aa26.8■■□□□ 1.88
VPS37C-202ENST00000535818 LRRFIP1Q32MZ4 808 aaKnown RBP26.8■■□□□ 1.88
VPS37C-202ENST00000535818 ERO1BQ86YB8 467 aa26.8■■□□□ 1.88
VPS37C-202ENST00000535818 TRIM34Q9BYJ4 488 aa26.8■■□□□ 1.88
VPS37C-202ENST00000535818 ARMT1Q9H993 441 aa26.8■■□□□ 1.88
VPS37C-202ENST00000535818 TSKSQ9UJT2 592 aa26.8■■□□□ 1.88
VPS37C-202ENST00000535818 PALD1Q9ULE6 856 aa26.8■■□□□ 1.88
VPS37C-202ENST00000535818 CHGBP05060 677 aa26.79■■□□□ 1.88
VPS37C-202ENST00000535818 MAP3K10Q02779 954 aa26.79■■□□□ 1.88
VPS37C-202ENST00000535818 SLC4A8Q2Y0W8 1093 aa26.79■■□□□ 1.88
VPS37C-202ENST00000535818 NOL9Q5SY16 702 aaKnown RBP26.79■■□□□ 1.88
VPS37C-202ENST00000535818 CRACR2BQ8N4Y2 399 aaPredicted RBP26.79■■□□□ 1.88
VPS37C-202ENST00000535818 FSD1Q9BTV5 496 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms