RNA–Protein interactions for RNA: ENST00000535788.1

UBB-204, Transcript of ubiquitin B, humanhuman

TSL 2 BASIC

Gene UBB, Length 704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-204ENST00000535788 PHKA1P46020 1223 aa11.34□□□□□ -0.59
UBB-204ENST00000535788 CRKP46108 304 aa11.34□□□□□ -0.59
UBB-204ENST00000535788 MCCD1P59942 119 aaPredicted RBP11.34□□□□□ -0.59
UBB-204ENST00000535788 FKBP1BP68106 108 aa11.34□□□□□ -0.59
UBB-204ENST00000535788 SREBF2Q12772 1141 aa11.34□□□□□ -0.59
UBB-204ENST00000535788 NOM1Q5C9Z4 860 aaKnown RBP11.34□□□□□ -0.59
UBB-204ENST00000535788 CHRDL2Q6WN34 429 aa11.34□□□□□ -0.59
UBB-204ENST00000535788 OTUD5Q96G74 571 aa11.34□□□□□ -0.59
UBB-204ENST00000535788 VEZTQ9HBM0 779 aa11.34□□□□□ -0.59
UBB-204ENST00000535788 GNL3LQ9NVN8 582 aaKnown RBP11.34□□□□□ -0.59
UBB-204ENST00000535788 A0A1B0GUL7 405 aa11.33□□□□□ -0.6
UBB-204ENST00000535788 MS4A1P11836 297 aa11.33□□□□□ -0.6
UBB-204ENST00000535788 NF2P35240 595 aa11.33□□□□□ -0.6
UBB-204ENST00000535788 TIMM10P62072 90 aa11.33□□□□□ -0.6
UBB-204ENST00000535788 G3BP1Q13283 466 aaKnown RBP eCLIP11.33□□□□□ -0.64e-8■■□□□ 14.3
UBB-204ENST00000535788 POLA2Q14181 598 aa11.33□□□□□ -0.6
UBB-204ENST00000535788 WDR66Q8TBY9 1149 aa11.33□□□□□ -0.6
UBB-204ENST00000535788 SGSM3Q96HU1 749 aa11.33□□□□□ -0.6
UBB-204ENST00000535788 TMEM106CQ9BVX2 250 aa11.33□□□□□ -0.6
UBB-204ENST00000535788 DEFB129Q9H1M3 183 aa11.33□□□□□ -0.6
UBB-204ENST00000535788 AKAP2Q9Y2D5 859 aa11.33□□□□□ -0.6
UBB-204ENST00000535788 SUGT1Q9Y2Z0 365 aa11.33□□□□□ -0.6
UBB-204ENST00000535788 ARIH1Q9Y4X5 557 aaPredicted RBP11.33□□□□□ -0.6
UBB-204ENST00000535788 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.33□□□□□ -0.6
UBB-204ENST00000535788 SEMA3EO15041 775 aa11.32□□□□□ -0.6
UBB-204ENST00000535788 MYCP01106 439 aaPredicted RBP11.32□□□□□ -0.6
UBB-204ENST00000535788 ATP8B2P98198 1209 aa11.32□□□□□ -0.6
UBB-204ENST00000535788 PRKG1Q13976 671 aa11.32□□□□□ -0.6
UBB-204ENST00000535788 MVPQ14764 893 aaKnown RBP11.32□□□□□ -0.6
UBB-204ENST00000535788 SPDYE2Q495Y8 402 aa11.32□□□□□ -0.6
UBB-204ENST00000535788 CCDC102BQ68D86 513 aa11.32□□□□□ -0.6
UBB-204ENST00000535788 MICAL1Q8TDZ2 1067 aa11.32□□□□□ -0.6
UBB-204ENST00000535788 MORC4Q8TE76 937 aa11.32□□□□□ -0.6
UBB-204ENST00000535788 SSH3Q8TE77 659 aa11.32□□□□□ -0.6
UBB-204ENST00000535788 TEKT1Q969V4 418 aa11.32□□□□□ -0.6
UBB-204ENST00000535788 XAGE2Q96GT9 111 aa11.32□□□□□ -0.6
UBB-204ENST00000535788 UBA5Q9GZZ9 404 aa11.32□□□□□ -0.6
UBB-204ENST00000535788 TDRD3Q9H7E2 651 aaKnown RBP11.32□□□□□ -0.6
UBB-204ENST00000535788 PTPN22Q9Y2R2 807 aa11.32□□□□□ -0.6
UBB-204ENST00000535788 PPP2R3BQ9Y5P8 575 aa11.32□□□□□ -0.6
UBB-204ENST00000535788 SSC5DA1L4H1 1573 aa11.32□□□□□ -0.6
UBB-204ENST00000535788 MAST3O60307 1309 aa11.32□□□□□ -0.6
UBB-204ENST00000535788 CLGNO14967 610 aa11.31□□□□□ -0.6
UBB-204ENST00000535788 SURF6O75683 361 aaKnown RBP11.31□□□□□ -0.6
UBB-204ENST00000535788 HDLBPQ00341 1268 aaKnown RBP11.31□□□□□ -0.6
UBB-204ENST00000535788 RASGRF1Q13972 1273 aa11.31□□□□□ -0.6
UBB-204ENST00000535788 SLC4A8Q2Y0W8 1093 aa11.31□□□□□ -0.6
UBB-204ENST00000535788 CEP85Q6P2H3 762 aa11.31□□□□□ -0.6
UBB-204ENST00000535788 CD99L2Q8TCZ2 262 aa11.31□□□□□ -0.6
UBB-204ENST00000535788 NEUROD6Q96NK8 337 aa11.31□□□□□ -0.6
UBB-204ENST00000535788 ZNF70Q9UC06 446 aaPredicted RBP11.31□□□□□ -0.6
UBB-204ENST00000535788 DENND2AQ9ULE3 1009 aa11.31□□□□□ -0.6
UBB-204ENST00000535788 COG6Q9Y2V7 657 aa11.31□□□□□ -0.6
UBB-204ENST00000535788 CEP290O15078 2479 aa11.31□□□□□ -0.6
UBB-204ENST00000535788 PRDX5P30044 214 aa11.3□□□□□ -0.6
UBB-204ENST00000535788 TNFAIP1Q13829 316 aa11.3□□□□□ -0.6
UBB-204ENST00000535788 RASA3Q14644 834 aa11.3□□□□□ -0.6
UBB-204ENST00000535788 APBB1IPQ7Z5R6 666 aaPredicted RBP11.3□□□□□ -0.6
UBB-204ENST00000535788 ZDHHC15Q96MV8 337 aa11.3□□□□□ -0.6
UBB-204ENST00000535788 DDX19BQ9UMR2 479 aa11.3□□□□□ -0.6
UBB-204ENST00000535788 SALL1Q9NSC2 1324 aa11.3□□□□□ -0.6
UBB-204ENST00000535788 RANBP2P49792 3224 aaKnown RBP11.29□□□□□ -0.6
UBB-204ENST00000535788 TCP10L2B9ZVM9 353 aa11.29□□□□□ -0.6
UBB-204ENST00000535788 LDHBP07195 334 aaKnown RBP11.29□□□□□ -0.6
UBB-204ENST00000535788 CACNB3P54284 484 aa11.29□□□□□ -0.6
UBB-204ENST00000535788 DIXDC1Q155Q3 683 aa11.29□□□□□ -0.6
UBB-204ENST00000535788 FOXD4L6Q3SYB3 417 aaPredicted RBP11.29□□□□□ -0.6
UBB-204ENST00000535788 FOXD4L3Q6VB84 417 aaPredicted RBP11.29□□□□□ -0.6
UBB-204ENST00000535788 ARMC9Q7Z3E5 817 aa11.29□□□□□ -0.6
UBB-204ENST00000535788 DPF3Q92784 378 aa11.29□□□□□ -0.6
UBB-204ENST00000535788 CFHR5Q9BXR6 569 aa11.29□□□□□ -0.6
UBB-204ENST00000535788 EFCC1Q9HA90 598 aa11.29□□□□□ -0.6
UBB-204ENST00000535788 ANGEL1Q9UNK9 670 aaKnown RBP11.29□□□□□ -0.6
UBB-204ENST00000535788 FZD1Q9UP38 647 aa11.29□□□□□ -0.6
UBB-204ENST00000535788 NOP58Q9Y2X3 529 aaKnown RBP11.29□□□□□ -0.6
UBB-204ENST00000535788 PDS5AQ29RF7 1337 aaKnown RBP11.29□□□□□ -0.6
UBB-204ENST00000535788 ALDH1A1P00352 501 aa11.28□□□□□ -0.6
UBB-204ENST00000535788 TNNI2P48788 182 aa11.28□□□□□ -0.6
UBB-204ENST00000535788 SUPT20HL1Q3ZLR7 823 aa11.28□□□□□ -0.6
UBB-204ENST00000535788 TNNI3KQ59H18 835 aa11.28□□□□□ -0.6
UBB-204ENST00000535788 NBPF12Q5TAG4 269 aaPredicted RBP11.28□□□□□ -0.6
UBB-204ENST00000535788 C20orf194Q5TEA3 1177 aa11.28□□□□□ -0.6
UBB-204ENST00000535788 APOBEC3HQ6NTF7 200 aaKnown RBP11.28□□□□□ -0.6
UBB-204ENST00000535788 HHIPL2Q6UWX4 724 aa11.28□□□□□ -0.6
UBB-204ENST00000535788 ZGPATQ8N5A5 531 aaKnown RBP11.28□□□□□ -0.6
UBB-204ENST00000535788 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.28□□□□□ -0.6
UBB-204ENST00000535788 ARMC5Q96C12 935 aa11.28□□□□□ -0.6
UBB-204ENST00000535788 ERO1AQ96HE7 468 aa11.28□□□□□ -0.6
UBB-204ENST00000535788 MRIQ9BWK5 157 aa11.28□□□□□ -0.6
UBB-204ENST00000535788 GPR108Q9NPR9 543 aa11.28□□□□□ -0.6
UBB-204ENST00000535788 TMOD2Q9NZR1 351 aa11.28□□□□□ -0.6
UBB-204ENST00000535788 ABCF2Q9UG63 623 aa11.28□□□□□ -0.6
UBB-204ENST00000535788 DAGLAQ9Y4D2 1042 aa11.28□□□□□ -0.6
UBB-204ENST00000535788 FPGT-TNNI3KV9GXZ4 949 aa11.28□□□□□ -0.6
UBB-204ENST00000535788 RIOK3O14730 519 aaKnown RBP11.27□□□□□ -0.61
UBB-204ENST00000535788 PPP1R12BO60237 982 aaPredicted RBP11.27□□□□□ -0.61
UBB-204ENST00000535788 ARID4AP29374 1257 aaPredicted RBP11.27□□□□□ -0.61
UBB-204ENST00000535788 SPRYD7Q5W111 196 aa11.27□□□□□ -0.61
UBB-204ENST00000535788 PI16Q6UXB8 463 aa11.27□□□□□ -0.61
UBB-204ENST00000535788 DZIP1Q86YF9 867 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms