RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 MAPKAPK5Q8IW41 473 aa14.54□□□□□ -0.08
CHD4-203ENST00000535717 TGFBRAP1Q8WUH2 860 aa14.54□□□□□ -0.08
CHD4-203ENST00000535717 RPAP1Q9BWH6 1393 aaPredicted RBP14.54□□□□□ -0.08
CHD4-203ENST00000535717 CDK5RAP2Q96SN8 1893 aa14.54□□□□□ -0.08
CHD4-203ENST00000535717 FLT1P17948 1338 aa14.53□□□□□ -0.08
CHD4-203ENST00000535717 M0R2C6 588 aa14.53□□□□□ -0.08
CHD4-203ENST00000535717 AIDAQ96BJ3 306 aa14.53□□□□□ -0.08
CHD4-203ENST00000535717 SEC62Q99442 399 aaKnown RBP14.53□□□□□ -0.08
CHD4-203ENST00000535717 CRNKL1Q9BZJ0 848 aaKnown RBP14.53□□□□□ -0.08
CHD4-203ENST00000535717 OSBPL5Q9H0X9 879 aaPredicted RBP14.53□□□□□ -0.08
CHD4-203ENST00000535717 GBA2Q9HCG7 927 aaPredicted RBP14.53□□□□□ -0.08
CHD4-203ENST00000535717 CEP350Q5VT06 3117 aa14.52□□□□□ -0.08
CHD4-203ENST00000535717 FOCADQ5VW36 1801 aa14.52□□□□□ -0.08
CHD4-203ENST00000535717 DDTLA6NHG4 134 aaPredicted RBP14.52□□□□□ -0.09
CHD4-203ENST00000535717 PRKAB2O43741 272 aa14.52□□□□□ -0.09
CHD4-203ENST00000535717 NF2P35240 595 aa14.52□□□□□ -0.09
CHD4-203ENST00000535717 USP5P45974 858 aa14.52□□□□□ -0.09
CHD4-203ENST00000535717 HTRA3P83110 453 aa14.52□□□□□ -0.09
CHD4-203ENST00000535717 PRKG1Q13976 671 aa14.52□□□□□ -0.09
CHD4-203ENST00000535717 MOB2Q70IA6 237 aa14.52□□□□□ -0.09
CHD4-203ENST00000535717 C2orf69Q8N8R5 385 aa14.52□□□□□ -0.09
CHD4-203ENST00000535717 STRBPQ96SI9 672 aaKnown RBP14.52□□□□□ -0.09
CHD4-203ENST00000535717 CREBZFQ9NS37 354 aa14.52□□□□□ -0.09
CHD4-203ENST00000535717 FZD1Q9UP38 647 aa14.52□□□□□ -0.09
CHD4-203ENST00000535717 AK9Q5TCS8 1911 aa14.52□□□□□ -0.09
CHD4-203ENST00000535717 COL2A1P02458 1487 aaPredicted RBP14.51□□□□□ -0.09
CHD4-203ENST00000535717 ATRNL1Q5VV63 1379 aa14.51□□□□□ -0.09
CHD4-203ENST00000535717 NMIQ13287 307 aaPredicted RBP14.51□□□□□ -0.09
CHD4-203ENST00000535717 ZSCAN29Q8IWY8 852 aaPredicted RBP14.51□□□□□ -0.09
CHD4-203ENST00000535717 SDR42E1Q8WUS8 393 aa14.51□□□□□ -0.09
CHD4-203ENST00000535717 FAM227BQ96M60 508 aa14.51□□□□□ -0.09
CHD4-203ENST00000535717 CSRNP1Q96S65 589 aa14.51□□□□□ -0.09
CHD4-203ENST00000535717 MKRN1Q9UHC7 482 aaKnown RBP14.51□□□□□ -0.09
CHD4-203ENST00000535717 SAP30BPQ9UHR5 308 aaKnown RBP14.51□□□□□ -0.09
CHD4-203ENST00000535717 PAPPA2Q9BXP8 1791 aa14.5□□□□□ -0.09
CHD4-203ENST00000535717 A0A0D9SFI3 127 aa14.5□□□□□ -0.09
CHD4-203ENST00000535717 GPAA1O43292 621 aa14.5□□□□□ -0.09
CHD4-203ENST00000535717 USP2O75604 605 aaPredicted RBP14.5□□□□□ -0.09
CHD4-203ENST00000535717 FKBP1BP68106 108 aa14.5□□□□□ -0.09
CHD4-203ENST00000535717 TTLL12Q14166 644 aaPredicted RBP14.5□□□□□ -0.09
CHD4-203ENST00000535717 SAPCD2Q86UD0 394 aa14.5□□□□□ -0.09
CHD4-203ENST00000535717 HELLSQ9NRZ9 838 aa14.5□□□□□ -0.09
CHD4-203ENST00000535717 PALD1Q9ULE6 856 aa14.5□□□□□ -0.09
CHD4-203ENST00000535717 ABT1Q9ULW3 272 aaKnown RBP14.5□□□□□ -0.09
CHD4-203ENST00000535717 TLL2Q9Y6L7 1015 aa14.5□□□□□ -0.09
CHD4-203ENST00000535717 SLC4A4Q9Y6R1 1079 aa14.5□□□□□ -0.09
CHD4-203ENST00000535717 UBE2Q2LH0YL09 131 aa14.49□□□□□ -0.09
CHD4-203ENST00000535717 PPP1R12BO60237 982 aaPredicted RBP14.49□□□□□ -0.09
CHD4-203ENST00000535717 SLURP2P0DP57 97 aa14.49□□□□□ -0.09
CHD4-203ENST00000535717 BMP2KLQ5H9B9 411 aa14.49□□□□□ -0.09
CHD4-203ENST00000535717 CCDC129Q6ZRS4 1044 aa14.49□□□□□ -0.09
CHD4-203ENST00000535717 MIGA2Q7L4E1 593 aa14.49□□□□□ -0.09
CHD4-203ENST00000535717 HOOK2Q96ED9 719 aa14.49□□□□□ -0.09
CHD4-203ENST00000535717 DCP1AQ9NPI6 582 aaPredicted RBP14.49□□□□□ -0.09
CHD4-203ENST00000535717 DIAPH3Q9NSV4 1193 aa14.49□□□□□ -0.09
CHD4-203ENST00000535717 ANGEL1Q9UNK9 670 aaKnown RBP14.49□□□□□ -0.09
CHD4-203ENST00000535717 GSG1L2A8MUP6 293 aa14.48□□□□□ -0.09
CHD4-203ENST00000535717 HIP1O00291 1037 aa14.48□□□□□ -0.09
CHD4-203ENST00000535717 HUNKP57058 714 aa14.48□□□□□ -0.09
CHD4-203ENST00000535717 MAP3K10Q02779 954 aa14.48□□□□□ -0.09
CHD4-203ENST00000535717 MAP3K11Q16584 847 aa14.48□□□□□ -0.09
CHD4-203ENST00000535717 SLC4A8Q2Y0W8 1093 aa14.48□□□□□ -0.09
CHD4-203ENST00000535717 MCMDC2Q4G0Z9 681 aa14.48□□□□□ -0.09
CHD4-203ENST00000535717 LDLRAD1Q5T700 205 aa14.48□□□□□ -0.09
CHD4-203ENST00000535717 ARMC9Q7Z3E5 817 aa14.48□□□□□ -0.09
CHD4-203ENST00000535717 DHX36Q9H2U1 1008 aaKnown RBP14.48□□□□□ -0.09
CHD4-203ENST00000535717 ATP8A2Q9NTI2 1148 aa14.48□□□□□ -0.09
CHD4-203ENST00000535717 DDX60LQ5H9U9 1706 aaKnown RBP14.48□□□□□ -0.09
CHD4-203ENST00000535717 MYH1P12882 1939 aa14.48□□□□□ -0.09
CHD4-203ENST00000535717 NAV1Q8NEY1 1877 aa14.47□□□□□ -0.09
CHD4-203ENST00000535717 GNAT2P19087 354 aa14.47□□□□□ -0.09
CHD4-203ENST00000535717 CHMLP26374 656 aa14.47□□□□□ -0.09
CHD4-203ENST00000535717 DCAF15Q66K64 600 aa14.47□□□□□ -0.09
CHD4-203ENST00000535717 CWC27Q6UX04 472 aaKnown RBP14.47□□□□□ -0.09
CHD4-203ENST00000535717 ZNF589Q86UQ0 364 aaPredicted RBP14.47□□□□□ -0.09
CHD4-203ENST00000535717 KLRG1Q96E93 195 aa14.47□□□□□ -0.09
CHD4-203ENST00000535717 MCM9Q9NXL9 1143 aa14.47□□□□□ -0.09
CHD4-203ENST00000535717 PI4KBQ9UBF8 816 aa14.47□□□□□ -0.09
CHD4-203ENST00000535717 SIPA1L1O43166 1804 aa14.46□□□□□ -0.09
CHD4-203ENST00000535717 RASSF10A6NK89 507 aa14.46□□□□□ -0.09
CHD4-203ENST00000535717 FAM196BA6NMK8 535 aa14.46□□□□□ -0.09
CHD4-203ENST00000535717 PATL2C9JE40 543 aaKnown RBP14.46□□□□□ -0.09
CHD4-203ENST00000535717 FOXP2O15409 715 aa14.46□□□□□ -0.09
CHD4-203ENST00000535717 TBC1D12O60347 775 aa14.46□□□□□ -0.09
CHD4-203ENST00000535717 CYP2D6P10635 497 aa14.46□□□□□ -0.09
CHD4-203ENST00000535717 IREB2P48200 963 aaKnown RBP14.46□□□□□ -0.09
CHD4-203ENST00000535717 PLCD1P51178 756 aa14.46□□□□□ -0.09
CHD4-203ENST00000535717 EVX2Q03828 476 aa14.46□□□□□ -0.09
CHD4-203ENST00000535717 METTL16Q86W50 562 aaKnown RBP14.46□□□□□ -0.09
CHD4-203ENST00000535717 HHIPL1Q96JK4 782 aa14.46□□□□□ -0.09
CHD4-203ENST00000535717 ZNF341Q9BYN7 854 aa14.46□□□□□ -0.09
CHD4-203ENST00000535717 EPB41L4AQ9HCS5 686 aaPredicted RBP14.46□□□□□ -0.09
CHD4-203ENST00000535717 ZNF112Q9UJU3 913 aa14.46□□□□□ -0.09
CHD4-203ENST00000535717 BAZ2AQ9UIF9 1905 aaKnown RBP14.45□□□□□ -0.1
CHD4-203ENST00000535717 PHF20L1A8MW92 1017 aa14.45□□□□□ -0.1
CHD4-203ENST00000535717 USP17L12C9JPN9 530 aa14.45□□□□□ -0.1
CHD4-203ENST00000535717 USP17L21D6R901 530 aa14.45□□□□□ -0.1
CHD4-203ENST00000535717 APPP05067 770 aa14.45□□□□□ -0.1
CHD4-203ENST00000535717 POLR3DP05423 398 aaPredicted RBP14.45□□□□□ -0.1
CHD4-203ENST00000535717 HLA-DOAP06340 250 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms