RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 SETDB2Q96T68 719 aa8.23□□□□□ -1.09
USP28-202ENST00000535607 OSMRQ99650 979 aa8.23□□□□□ -1.09
USP28-202ENST00000535607 SALL4Q9UJQ4 1053 aa8.23□□□□□ -1.09
USP28-202ENST00000535607 SLC6A14Q9UN76 642 aa8.23□□□□□ -1.09
USP28-202ENST00000535607 MED14O60244 1454 aa8.23□□□□□ -1.09
USP28-202ENST00000535607 LMTK3Q96Q04 1460 aa8.23□□□□□ -1.09
USP28-202ENST00000535607 ALKQ9UM73 1620 aa8.22□□□□□ -1.09
USP28-202ENST00000535607 ELOA3CA0A087WX78 387 aaPredicted RBP8.22□□□□□ -1.09
USP28-202ENST00000535607 ELOA3DA6NLF2 546 aaPredicted RBP8.22□□□□□ -1.09
USP28-202ENST00000535607 WFS1O76024 890 aa8.22□□□□□ -1.09
USP28-202ENST00000535607 KIF4AO95239 1232 aa8.22□□□□□ -1.09
USP28-202ENST00000535607 AMPD1P23109 780 aa8.22□□□□□ -1.09
USP28-202ENST00000535607 IRS1P35568 1242 aa8.22□□□□□ -1.09
USP28-202ENST00000535607 TSNAXIP1Q2TAA8 658 aa8.22□□□□□ -1.09
USP28-202ENST00000535607 ELOA3BQ3SY89 546 aa8.22□□□□□ -1.09
USP28-202ENST00000535607 ELOA3Q8NG57 546 aa8.22□□□□□ -1.09
USP28-202ENST00000535607 ANP32BQ92688 251 aaKnown RBP8.22□□□□□ -1.09
USP28-202ENST00000535607 FAM161BQ96MY7 647 aa8.22□□□□□ -1.09
USP28-202ENST00000535607 SUV39H2Q9H5I1 410 aa8.22□□□□□ -1.09
USP28-202ENST00000535607 LIN7BQ9HAP6 207 aa8.22□□□□□ -1.09
USP28-202ENST00000535607 ZFYVE1Q9HBF4 777 aa8.22□□□□□ -1.09
USP28-202ENST00000535607 FAM8A1Q9UBU6 413 aa8.22□□□□□ -1.09
USP28-202ENST00000535607 EID1Q9Y6B2 187 aa8.22□□□□□ -1.09
USP28-202ENST00000535607 ASXL1Q8IXJ9 1541 aa8.22□□□□□ -1.09
USP28-202ENST00000535607 DLC1Q96QB1 1528 aa8.21□□□□□ -1.1
USP28-202ENST00000535607 J3QW42 95 aa8.21□□□□□ -1.1
USP28-202ENST00000535607 ADAMTS2O95450 1211 aa8.21□□□□□ -1.1
USP28-202ENST00000535607 MAP3K10Q02779 954 aa8.21□□□□□ -1.1
USP28-202ENST00000535607 KIAA0319Q5VV43 1072 aa8.21□□□□□ -1.1
USP28-202ENST00000535607 SLCO4C1Q6ZQN7 724 aa8.21□□□□□ -1.1
USP28-202ENST00000535607 MAP7D2Q96T17 732 aa8.21□□□□□ -1.1
USP28-202ENST00000535607 BCO2Q9BYV7 579 aa8.21□□□□□ -1.1
USP28-202ENST00000535607 C12orf49Q9H741 205 aa8.21□□□□□ -1.1
USP28-202ENST00000535607 HCN2Q9UL51 889 aa8.21□□□□□ -1.1
USP28-202ENST00000535607 AK5Q9Y6K8 562 aa8.21□□□□□ -1.1
USP28-202ENST00000535607 ERBB4Q15303 1308 aa8.21□□□□□ -1.1
USP28-202ENST00000535607 SBNO2Q9Y2G9 1366 aa8.21□□□□□ -1.1
USP28-202ENST00000535607 TECPR2O15040 1411 aa8.2□□□□□ -1.1
USP28-202ENST00000535607 CPS1P31327 1500 aa8.2□□□□□ -1.1
USP28-202ENST00000535607 A0A1W2PP55 124 aa8.2□□□□□ -1.1
USP28-202ENST00000535607 ADARB2-AS1A8MUL3 147 aa8.2□□□□□ -1.1
USP28-202ENST00000535607 RGS9O75916 674 aaPredicted RBP8.2□□□□□ -1.1
USP28-202ENST00000535607 GSTT1P30711 240 aa8.2□□□□□ -1.1
USP28-202ENST00000535607 SKOR2Q2VWA4 1001 aaPredicted RBP8.2□□□□□ -1.1
USP28-202ENST00000535607 RNFT1Q5M7Z0 435 aa8.2□□□□□ -1.1
USP28-202ENST00000535607 CEP135Q66GS9 1140 aa8.2□□□□□ -1.1
USP28-202ENST00000535607 DTHD1Q6ZMT9 781 aa8.2□□□□□ -1.1
USP28-202ENST00000535607 PMFBP1Q8TBY8 1022 aa8.2□□□□□ -1.1
USP28-202ENST00000535607 ASAP3Q8TDY4 903 aa8.2□□□□□ -1.1
USP28-202ENST00000535607 PLD4Q96BZ4 506 aa8.2□□□□□ -1.1
USP28-202ENST00000535607 LATS2Q9NRM7 1088 aa8.2□□□□□ -1.1
USP28-202ENST00000535607 ADGRF5Q8IZF2 1346 aa8.2□□□□□ -1.1
USP28-202ENST00000535607 PIK3R4Q99570 1358 aa8.2□□□□□ -1.1
USP28-202ENST00000535607 ARHGEF28Q8N1W1 1705 aaKnown RBP8.2□□□□□ -1.1
USP28-202ENST00000535607 ST20-MTHFSA0A0A6YYL1 179 aa8.19□□□□□ -1.1
USP28-202ENST00000535607 VAMP1P23763 118 aa8.19□□□□□ -1.1
USP28-202ENST00000535607 TMF1P82094 1093 aa8.19□□□□□ -1.1
USP28-202ENST00000535607 PDE3AQ14432 1141 aa8.19□□□□□ -1.1
USP28-202ENST00000535607 NXPE4Q6UWF7 544 aa8.19□□□□□ -1.1
USP28-202ENST00000535607 PI16Q6UXB8 463 aa8.19□□□□□ -1.1
USP28-202ENST00000535607 TMEM87AQ8NBN3 555 aa8.19□□□□□ -1.1
USP28-202ENST00000535607 ZKSCAN3Q9BRR0 538 aa8.19□□□□□ -1.1
USP28-202ENST00000535607 PBX4Q9BYU1 374 aa8.19□□□□□ -1.1
USP28-202ENST00000535607 SMG9Q9H0W8 520 aaKnown RBP8.19□□□□□ -1.1
USP28-202ENST00000535607 MYH16Q9H6N6 1097 aa8.19□□□□□ -1.1
USP28-202ENST00000535607 C14orf93Q9H972 538 aaKnown RBP8.19□□□□□ -1.1
USP28-202ENST00000535607 XRN1Q8IZH2 1706 aaKnown RBP8.19□□□□□ -1.1
USP28-202ENST00000535607 CENPJQ9HC77 1338 aaPredicted RBP8.19□□□□□ -1.1
USP28-202ENST00000535607 ADAMTS13Q76LX8 1427 aa8.19□□□□□ -1.1
USP28-202ENST00000535607 NWD1Q149M9 1564 aa8.18□□□□□ -1.1
USP28-202ENST00000535607 UNCXA6NJT0 531 aa8.18□□□□□ -1.1
USP28-202ENST00000535607 PDE2AO00408 941 aaPredicted RBP8.18□□□□□ -1.1
USP28-202ENST00000535607 PLIN1O60240 522 aa8.18□□□□□ -1.1
USP28-202ENST00000535607 XRCC5P13010 732 aaKnown RBP8.18□□□□□ -1.1
USP28-202ENST00000535607 PTPRAP18433 802 aa8.18□□□□□ -1.1
USP28-202ENST00000535607 RGS3P49796 1198 aa8.18□□□□□ -1.1
USP28-202ENST00000535607 TERF1P54274 439 aa8.18□□□□□ -1.1
USP28-202ENST00000535607 CABP4P57796 275 aa8.18□□□□□ -1.1
USP28-202ENST00000535607 GRM2Q14416 872 aa8.18□□□□□ -1.1
USP28-202ENST00000535607 COL13A1Q5TAT6 717 aaPredicted RBP8.18□□□□□ -1.1
USP28-202ENST00000535607 PSAPL1Q6NUJ1 521 aa8.18□□□□□ -1.1
USP28-202ENST00000535607 KANK3Q6NY19 840 aa8.18□□□□□ -1.1
USP28-202ENST00000535607 MTERF4Q7Z6M4 381 aaKnown RBP8.18□□□□□ -1.1
USP28-202ENST00000535607 FCHSD1Q86WN1 690 aa8.18□□□□□ -1.1
USP28-202ENST00000535607 CEP120Q8N960 986 aa8.18□□□□□ -1.1
USP28-202ENST00000535607 GALNT6Q8NCL4 622 aa8.18□□□□□ -1.1
USP28-202ENST00000535607 CRELD1Q96HD1 420 aa8.18□□□□□ -1.1
USP28-202ENST00000535607 PDCL3Q9H2J4 239 aa8.18□□□□□ -1.1
USP28-202ENST00000535607 RASSF4Q9H2L5 321 aa8.18□□□□□ -1.1
USP28-202ENST00000535607 ENAMQ9NRM1 1142 aa8.18□□□□□ -1.1
USP28-202ENST00000535607 CHMP5Q9NZZ3 219 aa8.18□□□□□ -1.1
USP28-202ENST00000535607 FRRS1LQ9P0K9 344 aa8.18□□□□□ -1.1
USP28-202ENST00000535607 PTCH1Q13635 1447 aa8.18□□□□□ -1.1
USP28-202ENST00000535607 USP17L7P0C7H9 530 aa8.17□□□□□ -1.1
USP28-202ENST00000535607 CANXP27824 592 aaKnown RBP8.17□□□□□ -1.1
USP28-202ENST00000535607 FCGRTP55899 365 aa8.17□□□□□ -1.1
USP28-202ENST00000535607 ANKLE2Q86XL3 938 aa8.17□□□□□ -1.1
USP28-202ENST00000535607 CACTIN-AS1Q8N1I8 211 aa8.17□□□□□ -1.1
USP28-202ENST00000535607 EDARADDQ8WWZ3 215 aa8.17□□□□□ -1.1
USP28-202ENST00000535607 JPH1Q9HDC5 661 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms