RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 LMTK3Q96Q04 1460 aa14.16□□□□□ -0.14
SPG11-203ENST00000535302 RFX1P22670 979 aa14.16□□□□□ -0.14
SPG11-203ENST00000535302 LEO1Q8WVC0 666 aaPredicted RBP14.16□□□□□ -0.14
SPG11-203ENST00000535302 ANKRD2Q9GZV1 360 aa14.16□□□□□ -0.14
SPG11-203ENST00000535302 KIF5AQ12840 1032 aa14.16□□□□□ -0.14
SPG11-203ENST00000535302 V9GY48 417 aaPredicted RBP14.16□□□□□ -0.14
SPG11-203ENST00000535302 PTPROQ16827 1216 aa14.16□□□□□ -0.14
SPG11-203ENST00000535302 PLVAPQ9BX97 442 aa14.16□□□□□ -0.14
SPG11-203ENST00000535302 TNNI3KQ59H18 835 aa14.16□□□□□ -0.14
SPG11-203ENST00000535302 FPGT-TNNI3KV9GXZ4 949 aa14.16□□□□□ -0.14
SPG11-203ENST00000535302 USP26Q9BXU7 913 aa14.16□□□□□ -0.14
SPG11-203ENST00000535302 SLC27A2O14975 620 aa14.15□□□□□ -0.14
SPG11-203ENST00000535302 CALML3P27482 149 aa14.15□□□□□ -0.14
SPG11-203ENST00000535302 HIBADHP31937 336 aaKnown RBP14.15□□□□□ -0.14
SPG11-203ENST00000535302 SPOUT1Q5T280 376 aaKnown RBP14.15□□□□□ -0.14
SPG11-203ENST00000535302 NCAPH2Q6IBW4 605 aa14.15□□□□□ -0.14
SPG11-203ENST00000535302 PHKBQ93100 1093 aa14.15□□□□□ -0.14
SPG11-203ENST00000535302 PPME1Q9Y570 386 aa14.15□□□□□ -0.14
SPG11-203ENST00000535302 LAMC3Q9Y6N6 1575 aa14.15□□□□□ -0.14
SPG11-203ENST00000535302 TRAF5O00463 557 aa14.15□□□□□ -0.14
SPG11-203ENST00000535302 CCDC122Q5T0U0 273 aa14.15□□□□□ -0.14
SPG11-203ENST00000535302 ZBTB40Q9NUA8 1239 aa14.15□□□□□ -0.14
SPG11-203ENST00000535302 AFG3L2Q9Y4W6 797 aa14.15□□□□□ -0.14
SPG11-203ENST00000535302 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.15□□□□□ -0.14
SPG11-203ENST00000535302 A2MP01023 1474 aa14.15□□□□□ -0.14
SPG11-203ENST00000535302 SOS1Q07889 1333 aaPredicted RBP14.15□□□□□ -0.14
SPG11-203ENST00000535302 TRAPPC8Q9Y2L5 1435 aa14.15□□□□□ -0.14
SPG11-203ENST00000535302 FOXD4Q12950 439 aaPredicted RBP14.15□□□□□ -0.15
SPG11-203ENST00000535302 VPS52Q8N1B4 723 aa14.15□□□□□ -0.15
SPG11-203ENST00000535302 PPP1R12CQ9BZL4 782 aa14.15□□□□□ -0.15
SPG11-203ENST00000535302 GMNNO75496 209 aa14.14□□□□□ -0.15
SPG11-203ENST00000535302 HS2ST1Q7LGA3 356 aa14.14□□□□□ -0.15
SPG11-203ENST00000535302 CPXCR1Q8N123 301 aa14.14□□□□□ -0.15
SPG11-203ENST00000535302 CMTR1Q8N1G2 835 aaKnown RBP14.14□□□□□ -0.15
SPG11-203ENST00000535302 ARID4AP29374 1257 aaPredicted RBP14.14□□□□□ -0.15
SPG11-203ENST00000535302 MAN1A1P33908 653 aa14.14□□□□□ -0.15
SPG11-203ENST00000535302 PDE4DQ08499 809 aa14.14□□□□□ -0.15
SPG11-203ENST00000535302 BSPRYQ5W0U4 402 aa14.14□□□□□ -0.15
SPG11-203ENST00000535302 SV2BQ7L1I2 683 aa14.14□□□□□ -0.15
SPG11-203ENST00000535302 GNA11P29992 359 aa14.14□□□□□ -0.15
SPG11-203ENST00000535302 ZNF790Q6PG37 636 aa14.14□□□□□ -0.15
SPG11-203ENST00000535302 PRAG1Q86YV5 1406 aa14.14□□□□□ -0.15
SPG11-203ENST00000535302 DYNC1I1O14576 645 aa14.14□□□□□ -0.15
SPG11-203ENST00000535302 RPS6KB1P23443 525 aa14.14□□□□□ -0.15
SPG11-203ENST00000535302 FAM47AQ5JRC9 791 aa14.14□□□□□ -0.15
SPG11-203ENST00000535302 DYMQ7RTS9 669 aa14.14□□□□□ -0.15
SPG11-203ENST00000535302 SUCLG2Q96I99 432 aa14.14□□□□□ -0.15
SPG11-203ENST00000535302 EYA3Q99504 573 aa14.14□□□□□ -0.15
SPG11-203ENST00000535302 FAM114A2Q9NRY5 505 aa14.14□□□□□ -0.15
SPG11-203ENST00000535302 DENND2AQ9ULE3 1009 aa14.14□□□□□ -0.15
SPG11-203ENST00000535302 BICDL2A1A5D9 508 aa14.14□□□□□ -0.15
SPG11-203ENST00000535302 TXNDC9O14530 226 aa14.14□□□□□ -0.15
SPG11-203ENST00000535302 PLCG2P16885 1265 aa14.14□□□□□ -0.15
SPG11-203ENST00000535302 ABL1P00519 1130 aa14.13□□□□□ -0.15
SPG11-203ENST00000535302 ZNF131P52739 623 aa14.13□□□□□ -0.15
SPG11-203ENST00000535302 MAPKAPK5Q8IW41 473 aa14.13□□□□□ -0.15
SPG11-203ENST00000535302 MGARPQ8TDB4 240 aa14.13□□□□□ -0.15
SPG11-203ENST00000535302 STAMQ92783 540 aa14.13□□□□□ -0.15
SPG11-203ENST00000535302 CCDC77Q9BR77 488 aa14.13□□□□□ -0.15
SPG11-203ENST00000535302 NACA2Q9H009 215 aa14.13□□□□□ -0.15
SPG11-203ENST00000535302 NOC4LQ9BVI4 516 aaKnown RBP14.13□□□□□ -0.15
SPG11-203ENST00000535302 C19orf44Q9H6X5 657 aa14.13□□□□□ -0.15
SPG11-203ENST00000535302 RAPGEF6Q8TEU7 1601 aa14.13□□□□□ -0.15
SPG11-203ENST00000535302 CASC4Q6P4E1 433 aa14.13□□□□□ -0.15
SPG11-203ENST00000535302 ATP2A1O14983 1001 aa14.13□□□□□ -0.15
SPG11-203ENST00000535302 SPAG1Q07617 926 aa14.13□□□□□ -0.15
SPG11-203ENST00000535302 IFRD2Q12894 506 aaPredicted RBP14.13□□□□□ -0.15
SPG11-203ENST00000535302 KRT222Q8N1A0 295 aa14.13□□□□□ -0.15
SPG11-203ENST00000535302 KCNJ14Q9UNX9 436 aa14.13□□□□□ -0.15
SPG11-203ENST00000535302 NOD1Q9Y239 953 aa14.13□□□□□ -0.15
SPG11-203ENST00000535302 UTP14CQ5TAP6 766 aaKnown RBP14.13□□□□□ -0.15
SPG11-203ENST00000535302 IP6K1Q92551 441 aa14.13□□□□□ -0.15
SPG11-203ENST00000535302 USP19O94966 1318 aa14.13□□□□□ -0.15
SPG11-203ENST00000535302 KRT86O43790 486 aa14.13□□□□□ -0.15
SPG11-203ENST00000535302 CUL4BQ13620 913 aa14.12□□□□□ -0.15
SPG11-203ENST00000535302 GKAP1Q5VSY0 366 aaPredicted RBP14.12□□□□□ -0.15
SPG11-203ENST00000535302 C4orf50Q6ZRC1 276 aa14.12□□□□□ -0.15
SPG11-203ENST00000535302 GOLGA1Q92805 767 aa14.12□□□□□ -0.15
SPG11-203ENST00000535302 PICK1Q9NRD5 415 aa14.12□□□□□ -0.15
SPG11-203ENST00000535302 FEZ2Q9UHY8 353 aaPredicted RBP14.12□□□□□ -0.15
SPG11-203ENST00000535302 KRT83P78385 493 aa14.12□□□□□ -0.15
SPG11-203ENST00000535302 CCDC117Q8IWD4 279 aaPredicted RBP14.12□□□□□ -0.15
SPG11-203ENST00000535302 C17orf53Q8N3J3 647 aaPredicted RBP14.12□□□□□ -0.15
SPG11-203ENST00000535302 RBM28Q9NW13 759 aaKnown RBP14.12□□□□□ -0.15
SPG11-203ENST00000535302 GAS8O95995 478 aa14.12□□□□□ -0.15
SPG11-203ENST00000535302 BEND3Q5T5X7 828 aa14.12□□□□□ -0.15
SPG11-203ENST00000535302 NBPF14Q5TI25 921 aa14.12□□□□□ -0.15
SPG11-203ENST00000535302 TGFBRAP1Q8WUH2 860 aa14.12□□□□□ -0.15
SPG11-203ENST00000535302 HELLSQ9NRZ9 838 aa14.12□□□□□ -0.15
SPG11-203ENST00000535302 PUM3Q15397 648 aaKnown RBP14.12□□□□□ -0.15
SPG11-203ENST00000535302 EDC3Q96F86 508 aaKnown RBP14.12□□□□□ -0.15
SPG11-203ENST00000535302 GGA1Q9UJY5 639 aa14.12□□□□□ -0.15
SPG11-203ENST00000535302 PNMA6EA0A0J9YXQ4 647 aa14.12□□□□□ -0.15
SPG11-203ENST00000535302 GPAA1O43292 621 aa14.12□□□□□ -0.15
SPG11-203ENST00000535302 FRMD4BQ9Y2L6 1034 aa14.12□□□□□ -0.15
SPG11-203ENST00000535302 SNX14Q9Y5W7 946 aa14.12□□□□□ -0.15
SPG11-203ENST00000535302 ZBTB7BO15156 539 aaPredicted RBP14.11□□□□□ -0.15
SPG11-203ENST00000535302 OPA1O60313 960 aa14.11□□□□□ -0.15
SPG11-203ENST00000535302 TAB3Q8N5C8 712 aaPredicted RBP14.11□□□□□ -0.15
SPG11-203ENST00000535302 CCDC110Q8TBZ0 833 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms