RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 ID3Q02535 119 aa10.49□□□□□ -0.73
CASP4-213ENST00000534356 INPP5AQ14642 412 aa10.49□□□□□ -0.73
CASP4-213ENST00000534356 CCDC84Q86UT8 332 aaPredicted RBP10.49□□□□□ -0.73
CASP4-213ENST00000534356 ZNF654Q8IZM8 581 aa10.49□□□□□ -0.73
CASP4-213ENST00000534356 FAM46AQ96IP4 442 aaKnown RBP10.49□□□□□ -0.73
CASP4-213ENST00000534356 SSBP4Q9BWG4 385 aaPredicted RBP10.49□□□□□ -0.73
CASP4-213ENST00000534356 AP4E1Q9UPM8 1137 aa10.49□□□□□ -0.73
CASP4-213ENST00000534356 FAM221AA4D161 298 aa10.48□□□□□ -0.73
CASP4-213ENST00000534356 DCDC2CA8MYV0 355 aa10.48□□□□□ -0.73
CASP4-213ENST00000534356 SART1O43290 800 aaKnown RBP10.48□□□□□ -0.73
CASP4-213ENST00000534356 LRFN4Q6PJG9 635 aa10.48□□□□□ -0.73
CASP4-213ENST00000534356 C2CD4AQ8NCU7 369 aaPredicted RBP10.48□□□□□ -0.73
CASP4-213ENST00000534356 GATAD2BQ8WXI9 593 aa10.48□□□□□ -0.73
CASP4-213ENST00000534356 SPON2Q9BUD6 331 aa10.48□□□□□ -0.73
CASP4-213ENST00000534356 TGIF2Q9GZN2 237 aa10.48□□□□□ -0.73
CASP4-213ENST00000534356 CRIM1Q9NZV1 1036 aa10.48□□□□□ -0.73
CASP4-213ENST00000534356 CSADQ9Y600 493 aa10.48□□□□□ -0.73
CASP4-213ENST00000534356 GREM1O60565 184 aa10.47□□□□□ -0.73
CASP4-213ENST00000534356 DYMQ7RTS9 669 aa10.47□□□□□ -0.73
CASP4-213ENST00000534356 KIAA0825Q8IV33 1275 aa10.47□□□□□ -0.73
CASP4-213ENST00000534356 FBXO27Q8NI29 283 aa10.47□□□□□ -0.73
CASP4-213ENST00000534356 PLPPR2Q96GM1 343 aa10.47□□□□□ -0.73
CASP4-213ENST00000534356 SUPT16HQ9Y5B9 1047 aaKnown RBP10.47□□□□□ -0.73
CASP4-213ENST00000534356 ACTL7BQ9Y614 415 aa10.47□□□□□ -0.73
CASP4-213ENST00000534356 CILPO75339 1184 aa10.46□□□□□ -0.73
CASP4-213ENST00000534356 FAM196AQ6ZSG2 479 aa10.46□□□□□ -0.73
CASP4-213ENST00000534356 C12orf40Q86WS4 652 aa10.46□□□□□ -0.73
CASP4-213ENST00000534356 ARMC10Q8N2F6 343 aa10.46□□□□□ -0.73
CASP4-213ENST00000534356 FANCD2OSQ96PS1 177 aa10.46□□□□□ -0.73
CASP4-213ENST00000534356 ACBD3Q9H3P7 528 aa10.46□□□□□ -0.73
CASP4-213ENST00000534356 DISC1Q9NRI5 854 aa10.46□□□□□ -0.73
CASP4-213ENST00000534356 WIPI1Q5MNZ9 446 aaPredicted RBP10.45□□□□□ -0.74
CASP4-213ENST00000534356 ELMO3Q96BJ8 720 aa10.45□□□□□ -0.74
CASP4-213ENST00000534356 EAF1Q96JC9 268 aaPredicted RBP10.45□□□□□ -0.74
CASP4-213ENST00000534356 GSX1Q9H4S2 264 aaPredicted RBP10.45□□□□□ -0.74
CASP4-213ENST00000534356 FAM105AQ9NUU6 356 aa10.45□□□□□ -0.74
CASP4-213ENST00000534356 GFRA2O00451 464 aa10.44□□□□□ -0.74
CASP4-213ENST00000534356 GAS2O43903 313 aaKnown RBP10.44□□□□□ -0.74
CASP4-213ENST00000534356 ASPAP45381 313 aa10.44□□□□□ -0.74
CASP4-213ENST00000534356 CRKP46108 304 aa10.44□□□□□ -0.74
CASP4-213ENST00000534356 ERVK-24P63145 666 aa10.44□□□□□ -0.74
CASP4-213ENST00000534356 RPL6Q02878 288 aaKnown RBP10.44□□□□□ -0.74
CASP4-213ENST00000534356 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.44□□□□□ -0.74
CASP4-213ENST00000534356 UTP4Q969X6 686 aaKnown RBP10.44□□□□□ -0.74
CASP4-213ENST00000534356 CCSER2Q9H7U1 834 aa10.44□□□□□ -0.74
CASP4-213ENST00000534356 UBP1Q9NZI7 540 aa10.44□□□□□ -0.74
CASP4-213ENST00000534356 HIF3AQ9Y2N7 669 aa10.44□□□□□ -0.74
CASP4-213ENST00000534356 SNCAIPQ9Y6H5 919 aa10.44□□□□□ -0.74
CASP4-213ENST00000534356 TLR3O15455 904 aaKnown RBP10.43□□□□□ -0.74
CASP4-213ENST00000534356 RING1Q06587 406 aa10.43□□□□□ -0.74
CASP4-213ENST00000534356 UVSSAQ2YD98 709 aa10.43□□□□□ -0.74
CASP4-213ENST00000534356 PPM1JQ5JR12 505 aa10.43□□□□□ -0.74
CASP4-213ENST00000534356 CDPF1Q6NVV7 123 aa10.43□□□□□ -0.74
CASP4-213ENST00000534356 CYFIP1Q7L576 1253 aa10.43□□□□□ -0.74
CASP4-213ENST00000534356 HDXQ7Z353 690 aa10.43□□□□□ -0.74
CASP4-213ENST00000534356 ATXN3LQ9H3M9 355 aa10.43□□□□□ -0.74
CASP4-213ENST00000534356 TPSG1Q9NRR2 321 aa10.43□□□□□ -0.74
CASP4-213ENST00000534356 BPNT1O95861 308 aa10.42□□□□□ -0.74
CASP4-213ENST00000534356 TNNI2P48788 182 aa10.42□□□□□ -0.74
CASP4-213ENST00000534356 PAK2Q13177 524 aa10.42□□□□□ -0.74
CASP4-213ENST00000534356 MPP2Q14168 576 aa10.42□□□□□ -0.74
CASP4-213ENST00000534356 SGO2Q562F6 1265 aa10.42□□□□□ -0.74
CASP4-213ENST00000534356 TP53INP1Q96A56 240 aa10.42□□□□□ -0.74
CASP4-213ENST00000534356 MYRFLQ96LU7 910 aa10.42□□□□□ -0.74
CASP4-213ENST00000534356 NT5C1AQ9BXI3 368 aa10.42□□□□□ -0.74
CASP4-213ENST00000534356 PROCP04070 461 aa10.41□□□□□ -0.74
CASP4-213ENST00000534356 BMP3P12645 472 aa10.41□□□□□ -0.74
CASP4-213ENST00000534356 USP11P51784 963 aa10.41□□□□□ -0.74
CASP4-213ENST00000534356 TTLL4Q14679 1199 aa10.41□□□□□ -0.74
CASP4-213ENST00000534356 GPAT2Q6NUI2 795 aa10.41□□□□□ -0.74
CASP4-213ENST00000534356 SPOCK3Q9BQ16 436 aa10.41□□□□□ -0.74
CASP4-213ENST00000534356 ROBO2Q9HCK4 1378 aa10.4□□□□□ -0.74
CASP4-213ENST00000534356 PRAMEF27A3QJZ7 478 aa10.4□□□□□ -0.74
CASP4-213ENST00000534356 NEFMP07197 916 aa10.4□□□□□ -0.74
CASP4-213ENST00000534356 HCLS1P14317 486 aaPredicted RBP10.4□□□□□ -0.74
CASP4-213ENST00000534356 APOBRQ0VD83 1088 aa10.4□□□□□ -0.74
CASP4-213ENST00000534356 DIEXFQ68CQ4 756 aaKnown RBP10.4□□□□□ -0.74
CASP4-213ENST00000534356 FAM20CQ8IXL6 584 aa10.4□□□□□ -0.74
CASP4-213ENST00000534356 RNF214Q8ND24 703 aa10.4□□□□□ -0.74
CASP4-213ENST00000534356 FBLIM1Q8WUP2 373 aa10.4□□□□□ -0.74
CASP4-213ENST00000534356 LRRC3Q9BY71 257 aa10.4□□□□□ -0.74
CASP4-213ENST00000534356 RAB6AP20340 208 aa10.39□□□□□ -0.75
CASP4-213ENST00000534356 NTF4P34130 210 aa10.39□□□□□ -0.75
CASP4-213ENST00000534356 DOC2BQ14184 412 aa10.39□□□□□ -0.75
CASP4-213ENST00000534356 REC114Q7Z4M0 266 aa10.39□□□□□ -0.75
CASP4-213ENST00000534356 ACSS3Q9H6R3 686 aa10.39□□□□□ -0.75
CASP4-213ENST00000534356 PIDD1Q9HB75 910 aa10.39□□□□□ -0.75
CASP4-213ENST00000534356 PICK1Q9NRD5 415 aa10.39□□□□□ -0.75
CASP4-213ENST00000534356 POLR3KQ9Y2Y1 108 aaPredicted RBP10.39□□□□□ -0.75
CASP4-213ENST00000534356 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.38□□□□□ -0.75
CASP4-213ENST00000534356 MSTNO14793 375 aa10.38□□□□□ -0.75
CASP4-213ENST00000534356 MAP4P27816 1152 aaKnown RBP10.38□□□□□ -0.75
CASP4-213ENST00000534356 CWF19L2Q2TBE0 894 aaKnown RBP10.38□□□□□ -0.75
CASP4-213ENST00000534356 SEZ6Q53EL9 994 aa10.38□□□□□ -0.75
CASP4-213ENST00000534356 ZBTB37Q5TC79 503 aa10.38□□□□□ -0.75
CASP4-213ENST00000534356 INPP5FQ9Y2H2 1132 aa10.38□□□□□ -0.75
CASP4-213ENST00000534356 FANCGO15287 622 aa10.37□□□□□ -0.75
CASP4-213ENST00000534356 DHX15O43143 795 aaKnown RBP10.37□□□□□ -0.75
CASP4-213ENST00000534356 RNGTTO60942 597 aaKnown RBP10.37□□□□□ -0.75
CASP4-213ENST00000534356 NFICP08651 508 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms