RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 CA12O43570 354 aa12.01□□□□□ -0.49
LDLRAD3-206ENST00000534091 ST18O60284 1047 aa12.01□□□□□ -0.49
LDLRAD3-206ENST00000534091 CHGBP05060 677 aa12.01□□□□□ -0.49
LDLRAD3-206ENST00000534091 HUNKP57058 714 aa12.01□□□□□ -0.49
LDLRAD3-206ENST00000534091 SLC9C2Q5TAH2 1124 aa12.01□□□□□ -0.49
LDLRAD3-206ENST00000534091 FKBP1CQ5VVH2 108 aa12.01□□□□□ -0.49
LDLRAD3-206ENST00000534091 CREB3L3Q68CJ9 461 aa12.01□□□□□ -0.49
LDLRAD3-206ENST00000534091 TEKT1Q969V4 418 aa12.01□□□□□ -0.49
LDLRAD3-206ENST00000534091 ZNF408Q9H9D4 720 aa12.01□□□□□ -0.49
LDLRAD3-206ENST00000534091 SNX14Q9Y5W7 946 aa12.01□□□□□ -0.49
LDLRAD3-206ENST00000534091 ZMYM6O95789 1325 aa12.01□□□□□ -0.49
LDLRAD3-206ENST00000534091 ZNF532Q9HCE3 1301 aa12.01□□□□□ -0.49
LDLRAD3-206ENST00000534091 CDK5RAP2Q96SN8 1893 aa12□□□□□ -0.49
LDLRAD3-206ENST00000534091 GPAA1O43292 621 aa12□□□□□ -0.49
LDLRAD3-206ENST00000534091 HSPD1P10809 573 aaKnown RBP12□□□□□ -0.49
LDLRAD3-206ENST00000534091 ZKSCAN1P17029 563 aaPredicted RBP12□□□□□ -0.49
LDLRAD3-206ENST00000534091 CRKP46108 304 aa12□□□□□ -0.49
LDLRAD3-206ENST00000534091 MCM2P49736 904 aa12□□□□□ -0.49
LDLRAD3-206ENST00000534091 FMR1Q06787 632 aaKnown RBP eCLIP12□□□□□ -0.49
LDLRAD3-206ENST00000534091 SUPT20HL1Q3ZLR7 823 aa12□□□□□ -0.49
LDLRAD3-206ENST00000534091 SPDYE2Q495Y8 402 aa12□□□□□ -0.49
LDLRAD3-206ENST00000534091 RGMBQ6NW40 437 aa12□□□□□ -0.49
LDLRAD3-206ENST00000534091 CCDC129Q6ZRS4 1044 aa12□□□□□ -0.49
LDLRAD3-206ENST00000534091 SLF2Q8IX21 1173 aa12□□□□□ -0.49
LDLRAD3-206ENST00000534091 AIDAQ96BJ3 306 aa12□□□□□ -0.49
LDLRAD3-206ENST00000534091 ZDHHC15Q96MV8 337 aa12□□□□□ -0.49
LDLRAD3-206ENST00000534091 PUS7LQ9H0K6 701 aaKnown RBP12□□□□□ -0.49
LDLRAD3-206ENST00000534091 WBP1LQ9NX94 342 aa12□□□□□ -0.49
LDLRAD3-206ENST00000534091 ASTN2O75129 1339 aaPredicted RBP12□□□□□ -0.49
LDLRAD3-206ENST00000534091 RPAP1Q9BWH6 1393 aaPredicted RBP12□□□□□ -0.49
LDLRAD3-206ENST00000534091 F8W031 263 aaPredicted RBP11.99□□□□□ -0.49
LDLRAD3-206ENST00000534091 SLC27A2O14975 620 aa11.99□□□□□ -0.49
LDLRAD3-206ENST00000534091 HSPA1AP0DMV8 641 aaKnown RBP11.99□□□□□ -0.49
LDLRAD3-206ENST00000534091 HSPA1BP0DMV9 641 aaKnown RBP11.99□□□□□ -0.49
LDLRAD3-206ENST00000534091 TNNI2P48788 182 aa11.99□□□□□ -0.49
LDLRAD3-206ENST00000534091 RBM5P52756 815 aaKnown RBP eCLIP11.99□□□□□ -0.49
LDLRAD3-206ENST00000534091 CHAF1AQ13111 956 aaPredicted RBP11.99□□□□□ -0.49
LDLRAD3-206ENST00000534091 KRT32Q14532 448 aa11.99□□□□□ -0.49
LDLRAD3-206ENST00000534091 MAP3K11Q16584 847 aa11.99□□□□□ -0.49
LDLRAD3-206ENST00000534091 SLFNL1Q499Z3 407 aa11.99□□□□□ -0.49
LDLRAD3-206ENST00000534091 SPTY2D1Q68D10 685 aaPredicted RBP11.99□□□□□ -0.49
LDLRAD3-206ENST00000534091 ARMC9Q7Z3E5 817 aa11.99□□□□□ -0.49
LDLRAD3-206ENST00000534091 RASEFQ8IZ41 740 aa11.99□□□□□ -0.49
LDLRAD3-206ENST00000534091 MAGEB6Q8N7X4 407 aa11.99□□□□□ -0.49
LDLRAD3-206ENST00000534091 HOOK2Q96ED9 719 aa11.99□□□□□ -0.49
LDLRAD3-206ENST00000534091 PRMT6Q96LA8 375 aaPredicted RBP11.99□□□□□ -0.49
LDLRAD3-206ENST00000534091 DEFB129Q9H1M3 183 aa11.99□□□□□ -0.49
LDLRAD3-206ENST00000534091 LRP2BPQ9P2M1 347 aa11.99□□□□□ -0.49
LDLRAD3-206ENST00000534091 LAMB1P07942 1786 aa11.99□□□□□ -0.49
LDLRAD3-206ENST00000534091 BAZ2AQ9UIF9 1905 aaKnown RBP11.98□□□□□ -0.49
LDLRAD3-206ENST00000534091 FOCADQ5VW36 1801 aa11.98□□□□□ -0.49
LDLRAD3-206ENST00000534091 K7ELQ4 463 aaPredicted RBP11.98□□□□□ -0.49
LDLRAD3-206ENST00000534091 GNAT2P19087 354 aa11.98□□□□□ -0.49
LDLRAD3-206ENST00000534091 PSMA5P28066 241 aa11.98□□□□□ -0.49
LDLRAD3-206ENST00000534091 CYP4F22Q6NT55 531 aa11.98□□□□□ -0.49
LDLRAD3-206ENST00000534091 ERICH6Q7L0X2 663 aa11.98□□□□□ -0.49
LDLRAD3-206ENST00000534091 FAM83AQ86UY5 434 aa11.98□□□□□ -0.49
LDLRAD3-206ENST00000534091 BEGAINQ9BUH8 593 aa11.98□□□□□ -0.49
LDLRAD3-206ENST00000534091 TMOD2Q9NZR1 351 aa11.98□□□□□ -0.49
LDLRAD3-206ENST00000534091 CTNNA3Q9UI47 895 aa11.98□□□□□ -0.49
LDLRAD3-206ENST00000534091 IQSEC3Q9UPP2 1182 aaPredicted RBP11.98□□□□□ -0.49
LDLRAD3-206ENST00000534091 FOXP2O15409 715 aa11.97□□□□□ -0.49
LDLRAD3-206ENST00000534091 PPP1R12BO60237 982 aaPredicted RBP11.97□□□□□ -0.49
LDLRAD3-206ENST00000534091 CD2BP2O95400 341 aaKnown RBP11.97□□□□□ -0.49
LDLRAD3-206ENST00000534091 LDHBP07195 334 aaKnown RBP11.97□□□□□ -0.49
LDLRAD3-206ENST00000534091 SLC10A3P09131 477 aa11.97□□□□□ -0.49
LDLRAD3-206ENST00000534091 CTCFP49711 727 aaPredicted RBP11.97□□□□□ -0.49
LDLRAD3-206ENST00000534091 ALX1Q15699 326 aa11.97□□□□□ -0.49
LDLRAD3-206ENST00000534091 VPS53Q5VIR6 699 aa11.97□□□□□ -0.49
LDLRAD3-206ENST00000534091 PAXIP1Q6ZW49 1069 aaPredicted RBP11.97□□□□□ -0.49
LDLRAD3-206ENST00000534091 NSUN4Q96CB9 384 aaKnown RBP11.97□□□□□ -0.49
LDLRAD3-206ENST00000534091 FAM163AQ96GL9 167 aaPredicted RBP11.97□□□□□ -0.49
LDLRAD3-206ENST00000534091 STRBPQ96SI9 672 aaKnown RBP11.97□□□□□ -0.49
LDLRAD3-206ENST00000534091 ZSWIM6Q9HCJ5 1215 aa11.97□□□□□ -0.49
LDLRAD3-206ENST00000534091 PRDM10Q9NQV6 1147 aa11.97□□□□□ -0.49
LDLRAD3-206ENST00000534091 ZNF70Q9UC06 446 aaPredicted RBP11.97□□□□□ -0.49
LDLRAD3-206ENST00000534091 ABCF2Q9UG63 623 aa11.97□□□□□ -0.49
LDLRAD3-206ENST00000534091 CYP21A2P08686 494 aa11.96□□□□□ -0.49
LDLRAD3-206ENST00000534091 ZNF157P51786 506 aaPredicted RBP11.96□□□□□ -0.49
LDLRAD3-206ENST00000534091 NEK4P51957 841 aa11.96□□□□□ -0.49
LDLRAD3-206ENST00000534091 TTC14Q96N46 770 aa11.96□□□□□ -0.49
LDLRAD3-206ENST00000534091 ALDH8A1Q9H2A2 487 aaPredicted RBP11.96□□□□□ -0.49
LDLRAD3-206ENST00000534091 RAI14Q9P0K7 980 aa11.96□□□□□ -0.49
LDLRAD3-206ENST00000534091 JAG2Q9Y219 1238 aa11.96□□□□□ -0.49
LDLRAD3-206ENST00000534091 NAV1Q8NEY1 1877 aa11.95□□□□□ -0.5
LDLRAD3-206ENST00000534091 FAM155AB1AL88 458 aaPredicted RBP11.95□□□□□ -0.5
LDLRAD3-206ENST00000534091 CYP7A1P22680 504 aa11.95□□□□□ -0.5
LDLRAD3-206ENST00000534091 RASA3Q14644 834 aa11.95□□□□□ -0.5
LDLRAD3-206ENST00000534091 LDLRAD1Q5T700 205 aa11.95□□□□□ -0.5
LDLRAD3-206ENST00000534091 NAA16Q6N069 864 aaPredicted RBP11.95□□□□□ -0.5
LDLRAD3-206ENST00000534091 APOBEC3HQ6NTF7 200 aaKnown RBP11.95□□□□□ -0.5
LDLRAD3-206ENST00000534091 ZNF384Q8TF68 577 aa11.95□□□□□ -0.5
LDLRAD3-206ENST00000534091 RIOK1Q9BRS2 568 aaKnown RBP11.95□□□□□ -0.5
LDLRAD3-206ENST00000534091 TDRD3Q9H7E2 651 aaKnown RBP11.95□□□□□ -0.5
LDLRAD3-206ENST00000534091 VEZTQ9HBM0 779 aa11.95□□□□□ -0.5
LDLRAD3-206ENST00000534091 SAGE1Q9NXZ1 904 aa11.95□□□□□ -0.5
LDLRAD3-206ENST00000534091 GAKO14976 1311 aa11.94□□□□□ -0.5
LDLRAD3-206ENST00000534091 CLRN2A0PK11 232 aa11.94□□□□□ -0.5
LDLRAD3-206ENST00000534091 PATL2C9JE40 543 aaKnown RBP11.94□□□□□ -0.5
LDLRAD3-206ENST00000534091 MBD4O95243 580 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms