RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 GATA6Q92908 595 aa6.94□□□□□ -1.3
ITGB1-219ENST00000534049 DISC1Q9NRI5 854 aa6.94□□□□□ -1.3
ITGB1-219ENST00000534049 ANGEL1Q9UNK9 670 aaKnown RBP6.94□□□□□ -1.3
ITGB1-219ENST00000534049 TTF2Q9UNY4 1162 aaKnown RBP6.94□□□□□ -1.3
ITGB1-219ENST00000534049 AK5Q9Y6K8 562 aa6.94□□□□□ -1.3
ITGB1-219ENST00000534049 MED26O95402 600 aa6.93□□□□□ -1.3
ITGB1-219ENST00000534049 ADMP35318 185 aa6.93□□□□□ -1.3
ITGB1-219ENST00000534049 STK35Q8TDR2 534 aa6.93□□□□□ -1.3
ITGB1-219ENST00000534049 GPBAR1Q8TDU6 330 aa6.93□□□□□ -1.3
ITGB1-219ENST00000534049 C1GALT1Q9NS00 363 aa6.93□□□□□ -1.3
ITGB1-219ENST00000534049 FAM170BA6NMN3 283 aa6.92□□□□□ -1.3
ITGB1-219ENST00000534049 RNGTTO60942 597 aaKnown RBP6.92□□□□□ -1.3
ITGB1-219ENST00000534049 PRNPP04156 253 aa6.92□□□□□ -1.3
ITGB1-219ENST00000534049 RLBP1P12271 317 aa6.92□□□□□ -1.3
ITGB1-219ENST00000534049 BMP6P22004 513 aa6.92□□□□□ -1.3
ITGB1-219ENST00000534049 TTLL4Q14679 1199 aa6.92□□□□□ -1.3
ITGB1-219ENST00000534049 MSMPQ1L6U9 139 aa6.92□□□□□ -1.3
ITGB1-219ENST00000534049 PCNX4Q63HM2 1172 aa6.92□□□□□ -1.3
ITGB1-219ENST00000534049 DIEXFQ68CQ4 756 aaKnown RBP6.92□□□□□ -1.3
ITGB1-219ENST00000534049 VSIG10LQ86VR7 867 aa6.92□□□□□ -1.3
ITGB1-219ENST00000534049 KCT2Q8NC54 265 aa6.92□□□□□ -1.3
ITGB1-219ENST00000534049 BSDC1Q9NW68 430 aaPredicted RBP6.92□□□□□ -1.3
ITGB1-219ENST00000534049 FANCGO15287 622 aa6.91□□□□□ -1.3
ITGB1-219ENST00000534049 FBXO24O75426 580 aa6.91□□□□□ -1.3
ITGB1-219ENST00000534049 LMNB1P20700 586 aa6.91□□□□□ -1.3
ITGB1-219ENST00000534049 GP2P55259 537 aaKnown RBP6.91□□□□□ -1.3
ITGB1-219ENST00000534049 RPS26P62854 115 aaKnown RBP6.91□□□□□ -1.3
ITGB1-219ENST00000534049 CCDC27Q2M243 656 aa6.91□□□□□ -1.3
ITGB1-219ENST00000534049 ZNF765Q7L2R6 523 aa6.91□□□□□ -1.3
ITGB1-219ENST00000534049 FBXL18Q96ME1 805 aa6.91□□□□□ -1.3
ITGB1-219ENST00000534049 DUSP9Q99956 384 aaKnown RBP6.91□□□□□ -1.3
ITGB1-219ENST00000534049 SSU72Q9NP77 194 aaKnown RBP6.91□□□□□ -1.3
ITGB1-219ENST00000534049 PICK1Q9NRD5 415 aa6.91□□□□□ -1.3
ITGB1-219ENST00000534049 PAGE1O75459 146 aa6.9□□□□□ -1.3
ITGB1-219ENST00000534049 HCLS1P14317 486 aaPredicted RBP6.9□□□□□ -1.3
ITGB1-219ENST00000534049 XPCQ01831 940 aaPredicted RBP6.9□□□□□ -1.3
ITGB1-219ENST00000534049 DNAJC14Q6Y2X3 702 aaPredicted RBP6.9□□□□□ -1.3
ITGB1-219ENST00000534049 NPAS4Q8IUM7 802 aa6.9□□□□□ -1.3
ITGB1-219ENST00000534049 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.9□□□□□ -1.3
ITGB1-219ENST00000534049 BCL11AQ9H165 835 aa6.9□□□□□ -1.3
ITGB1-219ENST00000534049 CELA3AP09093 270 aa6.89□□□□□ -1.31
ITGB1-219ENST00000534049 HOXA10P31260 410 aaPredicted RBP6.89□□□□□ -1.31
ITGB1-219ENST00000534049 PSMD2Q13200 908 aa6.89□□□□□ -1.31
ITGB1-219ENST00000534049 CCDC85BQ15834 202 aaPredicted RBP6.89□□□□□ -1.31
ITGB1-219ENST00000534049 STK11IPQ8N1F8 1099 aa6.89□□□□□ -1.31
ITGB1-219ENST00000534049 ISL2Q96A47 359 aa6.89□□□□□ -1.31
ITGB1-219ENST00000534049 ELMO3Q96BJ8 720 aa6.89□□□□□ -1.31
ITGB1-219ENST00000534049 MKNK2Q9HBH9 465 aa6.89□□□□□ -1.31
ITGB1-219ENST00000534049 PCDHA4Q9UN74 947 aa6.89□□□□□ -1.31
ITGB1-219ENST00000534049 DYNC1LI2O43237 492 aaPredicted RBP6.88□□□□□ -1.31
ITGB1-219ENST00000534049 FAM87AP0C7U9 286 aa6.88□□□□□ -1.31
ITGB1-219ENST00000534049 ST13P50502 369 aaKnown RBP6.88□□□□□ -1.31
ITGB1-219ENST00000534049 IRAK1P51617 712 aa6.88□□□□□ -1.31
ITGB1-219ENST00000534049 DAB2P98082 770 aa6.88□□□□□ -1.31
ITGB1-219ENST00000534049 TTBK2Q6IQ55 1244 aa6.88□□□□□ -1.31
ITGB1-219ENST00000534049 CDC37L1Q7L3B6 337 aa6.88□□□□□ -1.31
ITGB1-219ENST00000534049 HDXQ7Z353 690 aa6.88□□□□□ -1.31
ITGB1-219ENST00000534049 GRIN3AQ8TCU5 1115 aa6.88□□□□□ -1.31
ITGB1-219ENST00000534049 MISP3Q96FF7 219 aa6.88□□□□□ -1.31
ITGB1-219ENST00000534049 LRRC4CQ9HCJ2 640 aa6.88□□□□□ -1.31
ITGB1-219ENST00000534049 PARP2Q9UGN5 583 aa6.88□□□□□ -1.31
ITGB1-219ENST00000534049 NEFMP07197 916 aa6.87□□□□□ -1.31
ITGB1-219ENST00000534049 TMC4Q7Z404 712 aa6.87□□□□□ -1.31
ITGB1-219ENST00000534049 AGBL5Q8NDL9 886 aa6.87□□□□□ -1.31
ITGB1-219ENST00000534049 NOC4LQ9BVI4 516 aaKnown RBP6.87□□□□□ -1.31
ITGB1-219ENST00000534049 LGR6Q9HBX8 967 aa6.87□□□□□ -1.31
ITGB1-219ENST00000534049 CCDC39Q9UFE4 941 aa6.87□□□□□ -1.31
ITGB1-219ENST00000534049 TACC3Q9Y6A5 838 aa6.87□□□□□ -1.31
ITGB1-219ENST00000534049 SNCAIPQ9Y6H5 919 aa6.87□□□□□ -1.31
ITGB1-219ENST00000534049 RING1Q06587 406 aa6.86□□□□□ -1.31
ITGB1-219ENST00000534049 CDK5R2Q13319 367 aa6.86□□□□□ -1.31
ITGB1-219ENST00000534049 ZBTB37Q5TC79 503 aa6.86□□□□□ -1.31
ITGB1-219ENST00000534049 FBXO33Q7Z6M2 555 aa6.86□□□□□ -1.31
ITGB1-219ENST00000534049 SHISA5Q8N114 240 aa6.86□□□□□ -1.31
ITGB1-219ENST00000534049 ZNF507Q8TCN5 953 aa6.86□□□□□ -1.31
ITGB1-219ENST00000534049 OAS3Q9Y6K5 1087 aaKnown RBP6.86□□□□□ -1.31
ITGB1-219ENST00000534049 TAF1CQ15572 869 aaPredicted RBP6.85□□□□□ -1.31
ITGB1-219ENST00000534049 PPM1JQ5JR12 505 aa6.85□□□□□ -1.31
ITGB1-219ENST00000534049 MCTP1Q6DN14 999 aa6.85□□□□□ -1.31
ITGB1-219ENST00000534049 ARHGAP27Q6ZUM4 889 aa6.85□□□□□ -1.31
ITGB1-219ENST00000534049 NETO1Q8TDF5 533 aa6.85□□□□□ -1.31
ITGB1-219ENST00000534049 CRELD1Q96HD1 420 aa6.85□□□□□ -1.31
ITGB1-219ENST00000534049 PSMG3-AS1Q96PY0 264 aa6.85□□□□□ -1.31
ITGB1-219ENST00000534049 DUSP23Q9BVJ7 150 aa6.85□□□□□ -1.31
ITGB1-219ENST00000534049 GZF1Q9H116 711 aaPredicted RBP6.85□□□□□ -1.31
ITGB1-219ENST00000534049 MRS2Q9HD23 443 aa6.85□□□□□ -1.31
ITGB1-219ENST00000534049 ZC3H7BQ9UGR2 993 aaKnown RBP6.85□□□□□ -1.31
ITGB1-219ENST00000534049 GTF2IRD1Q9UHL9 959 aa6.85□□□□□ -1.31
ITGB1-219ENST00000534049 COL17A1Q9UMD9 1497 aaPredicted RBP6.85□□□□□ -1.31
ITGB1-219ENST00000534049 DCDC2CA8MYV0 355 aa6.84□□□□□ -1.31
ITGB1-219ENST00000534049 SORBS3O60504 671 aa6.84□□□□□ -1.31
ITGB1-219ENST00000534049 AGMOQ6ZNB7 445 aa6.84□□□□□ -1.31
ITGB1-219ENST00000534049 GAL3ST3Q96A11 431 aa6.84□□□□□ -1.31
ITGB1-219ENST00000534049 MIR1-1HGQ9H1L0 117 aa6.84□□□□□ -1.31
ITGB1-219ENST00000534049 SLC5A6Q9Y289 635 aa6.84□□□□□ -1.31
ITGB1-219ENST00000534049 IGF2BP3O00425 579 aaKnown RBP eCLIP6.83□□□□□ -1.32
ITGB1-219ENST00000534049 LRIG2O94898 1065 aa6.83□□□□□ -1.32
ITGB1-219ENST00000534049 NTF4P34130 210 aa6.83□□□□□ -1.32
ITGB1-219ENST00000534049 CAP2P40123 477 aa6.83□□□□□ -1.32
ITGB1-219ENST00000534049 LIG3P49916 1009 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms