RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.25■□□□□ 0.19
CMTM1-219ENST00000533953 SLC10A4Q96EP9 437 aa16.25■□□□□ 0.19
CMTM1-219ENST00000533953 GPATCH3Q96I76 525 aa16.25■□□□□ 0.19
CMTM1-219ENST00000533953 ELP3Q9H9T3 547 aa16.25■□□□□ 0.19
CMTM1-219ENST00000533953 SALL3Q9BXA9 1300 aa16.24■□□□□ 0.19
CMTM1-219ENST00000533953 MX1P20591 662 aa16.24■□□□□ 0.19
CMTM1-219ENST00000533953 IREB2P48200 963 aaKnown RBP16.24■□□□□ 0.19
CMTM1-219ENST00000533953 MAP3K11Q16584 847 aa16.24■□□□□ 0.19
CMTM1-219ENST00000533953 ZKSCAN4Q969J2 545 aaPredicted RBP16.24■□□□□ 0.19
CMTM1-219ENST00000533953 CCDC102AQ96A19 550 aa16.24■□□□□ 0.19
CMTM1-219ENST00000533953 SAP30BPQ9UHR5 308 aaKnown RBP16.24■□□□□ 0.19
CMTM1-219ENST00000533953 MYO5AQ9Y4I1 1855 aaKnown RBP16.24■□□□□ 0.19
CMTM1-219ENST00000533953 PAPPA2Q9BXP8 1791 aa16.23■□□□□ 0.19
CMTM1-219ENST00000533953 INPP5BP32019 993 aa16.23■□□□□ 0.19
CMTM1-219ENST00000533953 ADD2P35612 726 aa16.23■□□□□ 0.19
CMTM1-219ENST00000533953 GJA5P36382 358 aa16.23■□□□□ 0.19
CMTM1-219ENST00000533953 MAP3K9P80192 1104 aa16.23■□□□□ 0.19
CMTM1-219ENST00000533953 NUCB1Q02818 461 aa16.23■□□□□ 0.19
CMTM1-219ENST00000533953 CHD1LQ86WJ1 897 aa16.23■□□□□ 0.19
CMTM1-219ENST00000533953 WRNIP1Q96S55 665 aa16.23■□□□□ 0.19
CMTM1-219ENST00000533953 CSRNP1Q96S65 589 aa16.23■□□□□ 0.19
CMTM1-219ENST00000533953 OSBPL5Q9H0X9 879 aaPredicted RBP16.23■□□□□ 0.19
CMTM1-219ENST00000533953 TSKSQ9UJT2 592 aa16.23■□□□□ 0.19
CMTM1-219ENST00000533953 ECM29Q5VYK3 1845 aa16.23■□□□□ 0.19
CMTM1-219ENST00000533953 MAGEB6P1A0A0J9YX57 407 aa16.22■□□□□ 0.19
CMTM1-219ENST00000533953 MAP2K2P36507 400 aa16.22■□□□□ 0.19
CMTM1-219ENST00000533953 PDE1AP54750 535 aa16.22■□□□□ 0.19
CMTM1-219ENST00000533953 NOGQ13253 232 aa16.22■□□□□ 0.19
CMTM1-219ENST00000533953 VGLL4Q14135 290 aa16.22■□□□□ 0.19
CMTM1-219ENST00000533953 LCORLQ8N3X6 602 aa16.22■□□□□ 0.19
CMTM1-219ENST00000533953 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.22■□□□□ 0.19
CMTM1-219ENST00000533953 RIOK1Q9BRS2 568 aaKnown RBP16.22■□□□□ 0.19
CMTM1-219ENST00000533953 ARMT1Q9H993 441 aa16.22■□□□□ 0.19
CMTM1-219ENST00000533953 WBP1LQ9NX94 342 aa16.22■□□□□ 0.19
CMTM1-219ENST00000533953 PALD1Q9ULE6 856 aa16.22■□□□□ 0.19
CMTM1-219ENST00000533953 TTC41PQ6P2S7 1318 aa16.21■□□□□ 0.19
CMTM1-219ENST00000533953 FOXN1O15353 648 aa16.21■□□□□ 0.19
CMTM1-219ENST00000533953 PRKAB2O43741 272 aa16.21■□□□□ 0.19
CMTM1-219ENST00000533953 SPRYD7Q5W111 196 aa16.21■□□□□ 0.19
CMTM1-219ENST00000533953 ANKRD13AQ8IZ07 590 aa16.21■□□□□ 0.19
CMTM1-219ENST00000533953 ZNF341Q9BYN7 854 aa16.21■□□□□ 0.19
CMTM1-219ENST00000533953 STAP2Q9UGK3 403 aa16.21■□□□□ 0.19
CMTM1-219ENST00000533953 FLT1P17948 1338 aa16.2■□□□□ 0.18
CMTM1-219ENST00000533953 ERC2O15083 957 aa16.2■□□□□ 0.18
CMTM1-219ENST00000533953 GLRX3O76003 335 aaKnown RBP16.2■□□□□ 0.18
CMTM1-219ENST00000533953 PLCG2P16885 1265 aa16.2■□□□□ 0.18
CMTM1-219ENST00000533953 USP5P45974 858 aa16.2■□□□□ 0.18
CMTM1-219ENST00000533953 EVX2Q03828 476 aa16.2■□□□□ 0.18
CMTM1-219ENST00000533953 DCAF15Q66K64 600 aa16.2■□□□□ 0.18
CMTM1-219ENST00000533953 KBTBD3Q8NAB2 608 aa16.2■□□□□ 0.18
CMTM1-219ENST00000533953 WNK4Q96J92 1243 aa16.2■□□□□ 0.18
CMTM1-219ENST00000533953 PUS7LQ9H0K6 701 aaKnown RBP16.2■□□□□ 0.18
CMTM1-219ENST00000533953 SNCAIPQ9Y6H5 919 aa16.2■□□□□ 0.18
CMTM1-219ENST00000533953 ATRNL1Q5VV63 1379 aa16.2■□□□□ 0.18
CMTM1-219ENST00000533953 RPAP1Q9BWH6 1393 aaPredicted RBP16.2■□□□□ 0.18
CMTM1-219ENST00000533953 PHF20L1A8MW92 1017 aa16.19■□□□□ 0.18
CMTM1-219ENST00000533953 NPM3O75607 178 aaKnown RBP16.19■□□□□ 0.18
CMTM1-219ENST00000533953 MBD4O95243 580 aa16.19■□□□□ 0.18
CMTM1-219ENST00000533953 PDE4AP27815 886 aa16.19■□□□□ 0.18
CMTM1-219ENST00000533953 RRP1BQ14684 758 aaKnown RBP16.19■□□□□ 0.18
CMTM1-219ENST00000533953 PLEKHM2Q8IWE5 1019 aa16.19■□□□□ 0.18
CMTM1-219ENST00000533953 SDR42E1Q8WUS8 393 aa16.19■□□□□ 0.18
CMTM1-219ENST00000533953 OPTNQ96CV9 577 aa16.19■□□□□ 0.18
CMTM1-219ENST00000533953 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.19■□□□□ 0.18
CMTM1-219ENST00000533953 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.19■□□□□ 0.18
CMTM1-219ENST00000533953 ZNF112Q9UJU3 913 aa16.19■□□□□ 0.18
CMTM1-219ENST00000533953 IGSF3O75054 1194 aa16.18■□□□□ 0.18
CMTM1-219ENST00000533953 MAP2K1Q02750 393 aaPredicted RBP16.18■□□□□ 0.18
CMTM1-219ENST00000533953 CCDC84Q86UT8 332 aaPredicted RBP16.18■□□□□ 0.18
CMTM1-219ENST00000533953 OSBP2Q969R2 916 aa16.18■□□□□ 0.18
CMTM1-219ENST00000533953 HOOK2Q96ED9 719 aa16.18■□□□□ 0.18
CMTM1-219ENST00000533953 OTUD5Q96G74 571 aa16.18■□□□□ 0.18
CMTM1-219ENST00000533953 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.18■□□□□ 0.18
CMTM1-219ENST00000533953 CSADQ9Y600 493 aa16.18■□□□□ 0.18
CMTM1-219ENST00000533953 SMIM22K7EJ46 135 aa16.17■□□□□ 0.18
CMTM1-219ENST00000533953 RNF113AO15541 343 aaKnown RBP16.17■□□□□ 0.18
CMTM1-219ENST00000533953 CYP2D6P10635 497 aa16.17■□□□□ 0.18
CMTM1-219ENST00000533953 MAP3K10Q02779 954 aa16.17■□□□□ 0.18
CMTM1-219ENST00000533953 UBE3CQ15386 1083 aa16.17■□□□□ 0.18
CMTM1-219ENST00000533953 SHROOM1Q2M3G4 852 aaPredicted RBP16.17■□□□□ 0.18
CMTM1-219ENST00000533953 SKAP1Q86WV1 359 aa16.17■□□□□ 0.18
CMTM1-219ENST00000533953 SEC62Q99442 399 aaKnown RBP16.17■□□□□ 0.18
CMTM1-219ENST00000533953 FSD1Q9BTV5 496 aa16.17■□□□□ 0.18
CMTM1-219ENST00000533953 TRPA1O75762 1119 aa16.16■□□□□ 0.18
CMTM1-219ENST00000533953 JAG1P78504 1218 aa16.16■□□□□ 0.18
CMTM1-219ENST00000533953 ZSCAN25Q6NSZ9 544 aa16.16■□□□□ 0.18
CMTM1-219ENST00000533953 AIDAQ96BJ3 306 aa16.16■□□□□ 0.18
CMTM1-219ENST00000533953 CRNKL1Q9BZJ0 848 aaKnown RBP16.16■□□□□ 0.18
CMTM1-219ENST00000533953 MAST2Q6P0Q8 1798 aa16.15■□□□□ 0.18
CMTM1-219ENST00000533953 CYP2D7A0A087X1C5 515 aa16.15■□□□□ 0.18
CMTM1-219ENST00000533953 M0R2C6 588 aa16.15■□□□□ 0.18
CMTM1-219ENST00000533953 PLCD1P51178 756 aa16.15■□□□□ 0.18
CMTM1-219ENST00000533953 LBX1P52954 281 aa16.15■□□□□ 0.18
CMTM1-219ENST00000533953 BEGAINQ9BUH8 593 aa16.15■□□□□ 0.18
CMTM1-219ENST00000533953 DNAJC18Q9H819 358 aa16.15■□□□□ 0.18
CMTM1-219ENST00000533953 RNF186Q9NXI6 227 aa16.15■□□□□ 0.18
CMTM1-219ENST00000533953 PI4KBQ9UBF8 816 aa16.15■□□□□ 0.18
CMTM1-219ENST00000533953 DOCK2Q92608 1830 aa16.15■□□□□ 0.18
CMTM1-219ENST00000533953 SPDYE5A6NIY4 337 aa16.14■□□□□ 0.17
CMTM1-219ENST00000533953 UNCXA6NJT0 531 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms