RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 PITPNM2Q9BZ72 1349 aa14.25□□□□□ -0.13
COMMD9-208ENST00000533643 ENTPD3O75355 529 aa14.25□□□□□ -0.13
COMMD9-208ENST00000533643 YY1P25490 414 aa14.25□□□□□ -0.13
COMMD9-208ENST00000533643 TCP10Q12799 353 aa14.25□□□□□ -0.13
COMMD9-208ENST00000533643 KIAA1211Q6ZU35 1233 aa14.25□□□□□ -0.13
COMMD9-208ENST00000533643 APOBEC3FQ8IUX4 373 aaKnown RBP14.25□□□□□ -0.13
COMMD9-208ENST00000533643 IFNL3Q8IZI9 196 aa14.25□□□□□ -0.13
COMMD9-208ENST00000533643 GPBP1L1Q9HC44 474 aaPredicted RBP14.25□□□□□ -0.13
COMMD9-208ENST00000533643 SAP30BPQ9UHR5 308 aaKnown RBP14.25□□□□□ -0.13
COMMD9-208ENST00000533643 REC8O95072 547 aa14.24□□□□□ -0.13
COMMD9-208ENST00000533643 FGAP02671 866 aa14.24□□□□□ -0.13
COMMD9-208ENST00000533643 RASA3Q14644 834 aa14.24□□□□□ -0.13
COMMD9-208ENST00000533643 FAM83AQ86UY5 434 aa14.24□□□□□ -0.13
COMMD9-208ENST00000533643 FAM151AQ8WW52 585 aa14.24□□□□□ -0.13
COMMD9-208ENST00000533643 MAP4K1Q92918 833 aa14.24□□□□□ -0.13
COMMD9-208ENST00000533643 DCPSQ96C86 337 aaKnown RBP14.24□□□□□ -0.13
COMMD9-208ENST00000533643 NACAP1Q9BZK3 213 aa14.24□□□□□ -0.13
COMMD9-208ENST00000533643 OSBPL5Q9H0X9 879 aaPredicted RBP14.24□□□□□ -0.13
COMMD9-208ENST00000533643 CLEC11AQ9Y240 323 aa14.24□□□□□ -0.13
COMMD9-208ENST00000533643 USP17L12C9JPN9 530 aa14.23□□□□□ -0.13
COMMD9-208ENST00000533643 USP17L21D6R901 530 aa14.23□□□□□ -0.13
COMMD9-208ENST00000533643 TDO2P48775 406 aa14.23□□□□□ -0.13
COMMD9-208ENST00000533643 TNNI2P48788 182 aa14.23□□□□□ -0.13
COMMD9-208ENST00000533643 TNFAIP1Q13829 316 aa14.23□□□□□ -0.13
COMMD9-208ENST00000533643 CTR9Q6PD62 1173 aa14.23□□□□□ -0.13
COMMD9-208ENST00000533643 SH3BP5LQ7L8J4 393 aa14.23□□□□□ -0.13
COMMD9-208ENST00000533643 LDHDQ86WU2 507 aa14.23□□□□□ -0.13
COMMD9-208ENST00000533643 DDRGK1Q96HY6 314 aa14.23□□□□□ -0.13
COMMD9-208ENST00000533643 USP26Q9BXU7 913 aa14.23□□□□□ -0.13
COMMD9-208ENST00000533643 BACH2Q9BYV9 841 aa14.23□□□□□ -0.13
COMMD9-208ENST00000533643 TMEM39BQ9GZU3 492 aa14.23□□□□□ -0.13
COMMD9-208ENST00000533643 DEFB129Q9H1M3 183 aa14.23□□□□□ -0.13
COMMD9-208ENST00000533643 MCM9Q9NXL9 1143 aa14.23□□□□□ -0.13
COMMD9-208ENST00000533643 PALD1Q9ULE6 856 aa14.23□□□□□ -0.13
COMMD9-208ENST00000533643 U3KPZ7 1027 aaPredicted RBP14.23□□□□□ -0.13
COMMD9-208ENST00000533643 ECM29Q5VYK3 1845 aa14.22□□□□□ -0.13
COMMD9-208ENST00000533643 ZMYM6O95789 1325 aa14.22□□□□□ -0.13
COMMD9-208ENST00000533643 CYP2D7A0A087X1C5 515 aa14.22□□□□□ -0.13
COMMD9-208ENST00000533643 DDTLA6NHG4 134 aaPredicted RBP14.22□□□□□ -0.13
COMMD9-208ENST00000533643 CYP2D6P10635 497 aa14.22□□□□□ -0.13
COMMD9-208ENST00000533643 EVX2Q03828 476 aa14.22□□□□□ -0.13
COMMD9-208ENST00000533643 SBK1Q52WX2 424 aa14.22□□□□□ -0.13
COMMD9-208ENST00000533643 KRT26Q7Z3Y9 468 aa14.22□□□□□ -0.13
COMMD9-208ENST00000533643 USP48Q86UV5 1035 aa14.22□□□□□ -0.13
COMMD9-208ENST00000533643 CDAN1Q8IWY9 1227 aa14.22□□□□□ -0.13
COMMD9-208ENST00000533643 TEPSINQ96N21 525 aa14.22□□□□□ -0.13
COMMD9-208ENST00000533643 NAPBQ9H115 298 aa14.22□□□□□ -0.13
COMMD9-208ENST00000533643 RBM8AQ9Y5S9 174 aaKnown RBP14.22□□□□□ -0.13
COMMD9-208ENST00000533643 CDK5RAP2Q96SN8 1893 aa14.21□□□□□ -0.13
COMMD9-208ENST00000533643 ADM5C9JUS6 153 aa14.21□□□□□ -0.13
COMMD9-208ENST00000533643 SMIM22K7EJ46 135 aa14.21□□□□□ -0.13
COMMD9-208ENST00000533643 KIF3CO14782 793 aa14.21□□□□□ -0.13
COMMD9-208ENST00000533643 EIF5BO60841 1220 aaKnown RBP14.21□□□□□ -0.13
COMMD9-208ENST00000533643 POLR3DP05423 398 aaPredicted RBP14.21□□□□□ -0.13
COMMD9-208ENST00000533643 SLC4A8Q2Y0W8 1093 aa14.21□□□□□ -0.13
COMMD9-208ENST00000533643 C12orf60Q5U649 245 aa14.21□□□□□ -0.13
COMMD9-208ENST00000533643 MAP1SQ66K74 1059 aaPredicted RBP14.21□□□□□ -0.13
COMMD9-208ENST00000533643 DLK2Q6UY11 383 aa14.21□□□□□ -0.13
COMMD9-208ENST00000533643 SULF1Q8IWU6 871 aa14.21□□□□□ -0.13
COMMD9-208ENST00000533643 ZNF784Q8NCA9 323 aaPredicted RBP14.21□□□□□ -0.13
COMMD9-208ENST00000533643 CTNNA3Q9UI47 895 aa14.21□□□□□ -0.13
COMMD9-208ENST00000533643 ATRNL1Q5VV63 1379 aa14.21□□□□□ -0.14
COMMD9-208ENST00000533643 FOCADQ5VW36 1801 aa14.2□□□□□ -0.14
COMMD9-208ENST00000533643 COL2A1P02458 1487 aaPredicted RBP14.2□□□□□ -0.14
COMMD9-208ENST00000533643 MINDY4BA8MYZ0 360 aa14.2□□□□□ -0.14
COMMD9-208ENST00000533643 EPB41L2O43491 1005 aaKnown RBP14.2□□□□□ -0.14
COMMD9-208ENST00000533643 PLCD1P51178 756 aa14.2□□□□□ -0.14
COMMD9-208ENST00000533643 NECTIN1Q15223 517 aa14.2□□□□□ -0.14
COMMD9-208ENST00000533643 PRAMEF18Q5VWM3 479 aa14.2□□□□□ -0.14
COMMD9-208ENST00000533643 ZSCAN29Q8IWY8 852 aaPredicted RBP14.2□□□□□ -0.14
COMMD9-208ENST00000533643 GLIS2Q9BZE0 524 aaPredicted RBP14.2□□□□□ -0.14
COMMD9-208ENST00000533643 DHX36Q9H2U1 1008 aaKnown RBP14.2□□□□□ -0.14
COMMD9-208ENST00000533643 ARPP21Q9UBL0 812 aaPredicted RBP14.2□□□□□ -0.14
COMMD9-208ENST00000533643 PPP2R3BQ9Y5P8 575 aa14.2□□□□□ -0.14
COMMD9-208ENST00000533643 HAND2P61296 217 aa14.19□□□□□ -0.14
COMMD9-208ENST00000533643 NBPF12Q5TAG4 269 aaPredicted RBP14.19□□□□□ -0.14
COMMD9-208ENST00000533643 CDC37L1Q7L3B6 337 aa14.19□□□□□ -0.14
COMMD9-208ENST00000533643 TTC6Q86TZ1 520 aa14.19□□□□□ -0.14
COMMD9-208ENST00000533643 CSRNP1Q96S65 589 aa14.19□□□□□ -0.14
COMMD9-208ENST00000533643 ANAPC4Q9UJX5 808 aa14.19□□□□□ -0.14
COMMD9-208ENST00000533643 DDX60LQ5H9U9 1706 aaKnown RBP14.18□□□□□ -0.14
COMMD9-208ENST00000533643 SLC27A2O14975 620 aa14.18□□□□□ -0.14
COMMD9-208ENST00000533643 SLURP2P0DP57 97 aa14.18□□□□□ -0.14
COMMD9-208ENST00000533643 CTDSPL2Q05D32 466 aa14.18□□□□□ -0.14
COMMD9-208ENST00000533643 PPARAQ07869 468 aa14.18□□□□□ -0.14
COMMD9-208ENST00000533643 IMMTQ16891 758 aaKnown RBP14.18□□□□□ -0.14
COMMD9-208ENST00000533643 CREB3L3Q68CJ9 461 aa14.18□□□□□ -0.14
COMMD9-208ENST00000533643 CHADLQ6NUI6 762 aa14.18□□□□□ -0.14
COMMD9-208ENST00000533643 METTL16Q86W50 562 aaKnown RBP14.18□□□□□ -0.14
COMMD9-208ENST00000533643 AMOTL1Q8IY63 956 aa14.18□□□□□ -0.14
COMMD9-208ENST00000533643 DYNLL2Q96FJ2 89 aa14.18□□□□□ -0.14
COMMD9-208ENST00000533643 NBPF3Q9H094 633 aa14.18□□□□□ -0.14
COMMD9-208ENST00000533643 PI4KBQ9UBF8 816 aa14.18□□□□□ -0.14
COMMD9-208ENST00000533643 TAF6LQ9Y6J9 622 aa14.18□□□□□ -0.14
COMMD9-208ENST00000533643 NAV1Q8NEY1 1877 aa14.18□□□□□ -0.14
COMMD9-208ENST00000533643 TRAF5O00463 557 aa14.17□□□□□ -0.14
COMMD9-208ENST00000533643 ZNF213O14771 459 aa14.17□□□□□ -0.14
COMMD9-208ENST00000533643 HLA-DOAP06340 250 aa14.17□□□□□ -0.14
COMMD9-208ENST00000533643 CYP21A2P08686 494 aa14.17□□□□□ -0.14
COMMD9-208ENST00000533643 HSPA4P34932 840 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms