RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 SV2BQ7L1I2 683 aa19.82■□□□□ 0.76
PHRF1-205ENST00000533464 hCG_1642624A0A1W2PR95 340 aa19.81■□□□□ 0.76
PHRF1-205ENST00000533464 HSPD1P10809 573 aaKnown RBP19.81■□□□□ 0.76
PHRF1-205ENST00000533464 CEP112Q8N8E3 955 aa19.81■□□□□ 0.76
PHRF1-205ENST00000533464 ZBTB38Q8NAP3 1195 aaPredicted RBP19.81■□□□□ 0.76
PHRF1-205ENST00000533464 MAPK8IP1Q9UQF2 711 aa19.81■□□□□ 0.76
PHRF1-205ENST00000533464 PRDM15P57071 1507 aaPredicted RBP19.81■□□□□ 0.76
PHRF1-205ENST00000533464 ERBB4Q15303 1308 aa19.81■□□□□ 0.76
PHRF1-205ENST00000533464 GCOM1H8Y6P7 765 aaPredicted RBP19.81■□□□□ 0.76
PHRF1-205ENST00000533464 MYZAPP0CAP1 466 aa19.81■□□□□ 0.76
PHRF1-205ENST00000533464 AKR1B15C9JRZ8 316 aaPredicted RBP19.81■□□□□ 0.76
PHRF1-205ENST00000533464 PPP2R5BQ15173 497 aa19.81■□□□□ 0.76
PHRF1-205ENST00000533464 OSBPL3Q9H4L5 887 aa19.81■□□□□ 0.76
PHRF1-205ENST00000533464 RRAGDQ9NQL2 400 aaPredicted RBP19.81■□□□□ 0.76
PHRF1-205ENST00000533464 RPS8P62241 208 aaKnown RBP19.8■□□□□ 0.76
PHRF1-205ENST00000533464 FANCCQ00597 558 aa19.8■□□□□ 0.76
PHRF1-205ENST00000533464 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.8■□□□□ 0.761e-7■□□□□ 10.8
PHRF1-205ENST00000533464 CTNND2Q9UQB3 1225 aa19.8■□□□□ 0.76
PHRF1-205ENST00000533464 MYCNP04198 464 aaPredicted RBP19.8■□□□□ 0.76
PHRF1-205ENST00000533464 ZNF75DP51815 510 aa19.8■□□□□ 0.76
PHRF1-205ENST00000533464 RASEFQ8IZ41 740 aa19.8■□□□□ 0.76
PHRF1-205ENST00000533464 JDP2Q8WYK2 163 aa19.8■□□□□ 0.76
PHRF1-205ENST00000533464 VPS16Q9H269 839 aa19.8■□□□□ 0.76
PHRF1-205ENST00000533464 PCCAP05165 728 aaPredicted RBP19.79■□□□□ 0.76
PHRF1-205ENST00000533464 GOLGA1Q92805 767 aa19.79■□□□□ 0.76
PHRF1-205ENST00000533464 ZNF274Q96GC6 653 aaPredicted RBP19.79■□□□□ 0.76
PHRF1-205ENST00000533464 PKNOX2Q96KN3 472 aa19.79■□□□□ 0.76
PHRF1-205ENST00000533464 MTMR6Q9Y217 621 aa19.79■□□□□ 0.76
PHRF1-205ENST00000533464 CLASP1Q7Z460 1538 aa19.79■□□□□ 0.76
PHRF1-205ENST00000533464 IGSF22Q8N9C0 903 aa19.79■□□□□ 0.76
PHRF1-205ENST00000533464 FERMT2Q96AC1 680 aa19.79■□□□□ 0.76
PHRF1-205ENST00000533464 GOLGA6L10A0A0M3HER8 536 aa19.79■□□□□ 0.76
PHRF1-205ENST00000533464 PRAMEF22A3QJZ6 481 aa19.79■□□□□ 0.76
PHRF1-205ENST00000533464 DBNLQ9UJU6 430 aaKnown RBP19.79■□□□□ 0.76
PHRF1-205ENST00000533464 PDE4DQ08499 809 aa19.79■□□□□ 0.76
PHRF1-205ENST00000533464 CFAP74Q9C0B2 1584 aa19.79■□□□□ 0.76
PHRF1-205ENST00000533464 MYSM1Q5VVJ2 828 aa19.79■□□□□ 0.76
PHRF1-205ENST00000533464 MLKLQ8NB16 471 aa19.79■□□□□ 0.76
PHRF1-205ENST00000533464 PREX2Q70Z35 1606 aa19.78■□□□□ 0.76
PHRF1-205ENST00000533464 PDE6AP16499 860 aa19.78■□□□□ 0.76
PHRF1-205ENST00000533464 SIRT2Q8IXJ6 389 aa19.78■□□□□ 0.76
PHRF1-205ENST00000533464 LSG1Q9H089 658 aaKnown RBP19.78■□□□□ 0.76
PHRF1-205ENST00000533464 TRAF5O00463 557 aa19.78■□□□□ 0.76
PHRF1-205ENST00000533464 TBC1D8BQ0IIM8 1120 aa19.78■□□□□ 0.76
PHRF1-205ENST00000533464 CAPZA3Q96KX2 299 aa19.78■□□□□ 0.76
PHRF1-205ENST00000533464 CCNT1O60563 726 aaKnown RBP19.78■□□□□ 0.76
PHRF1-205ENST00000533464 TXKP42681 527 aa19.78■□□□□ 0.76
PHRF1-205ENST00000533464 MAPKAPK5Q8IW41 473 aa19.78■□□□□ 0.76
PHRF1-205ENST00000533464 CHAMP1Q96JM3 812 aa19.78■□□□□ 0.76
PHRF1-205ENST00000533464 TRERF1Q96PN7 1200 aa19.78■□□□□ 0.76
PHRF1-205ENST00000533464 TCHPQ9BT92 498 aa19.78■□□□□ 0.76
PHRF1-205ENST00000533464 SELENOOQ9BVL4 669 aa19.78■□□□□ 0.76
PHRF1-205ENST00000533464 MRVI1Q9Y6F6 885 aa19.78■□□□□ 0.76
PHRF1-205ENST00000533464 PHACTR2O75167 634 aa19.78■□□□□ 0.76
PHRF1-205ENST00000533464 TFAP4Q01664 338 aa19.78■□□□□ 0.76
PHRF1-205ENST00000533464 MPHOSPH6Q99547 160 aaKnown RBP19.78■□□□□ 0.76
PHRF1-205ENST00000533464 PLVAPQ9BX97 442 aa19.78■□□□□ 0.76
PHRF1-205ENST00000533464 TLR7Q9NYK1 1049 aaKnown RBP19.78■□□□□ 0.76
PHRF1-205ENST00000533464 VPS54Q9P1Q0 977 aa19.78■□□□□ 0.76
PHRF1-205ENST00000533464 CALCOCO1Q9P1Z2 691 aa19.78■□□□□ 0.76
PHRF1-205ENST00000533464 NLRP1Q9C000 1473 aa19.77■□□□□ 0.76
PHRF1-205ENST00000533464 FGAP02671 866 aa19.77■□□□□ 0.76
PHRF1-205ENST00000533464 C17orf53Q8N3J3 647 aaPredicted RBP19.77■□□□□ 0.76
PHRF1-205ENST00000533464 ZBTB21Q9ULJ3 1066 aa19.77■□□□□ 0.76
PHRF1-205ENST00000533464 TMEM94Q12767 1356 aa19.77■□□□□ 0.76
PHRF1-205ENST00000533464 PPARAQ07869 468 aa19.77■□□□□ 0.76
PHRF1-205ENST00000533464 CCDC65Q8IXS2 484 aa19.77■□□□□ 0.76
PHRF1-205ENST00000533464 USP17L12C9JPN9 530 aa19.77■□□□□ 0.76
PHRF1-205ENST00000533464 USP17L21D6R901 530 aa19.77■□□□□ 0.76
PHRF1-205ENST00000533464 ADCK5Q3MIX3 580 aa19.77■□□□□ 0.76
PHRF1-205ENST00000533464 NFE2L3Q9Y4A8 694 aa19.77■□□□□ 0.76
PHRF1-205ENST00000533464 HSF2BPO75031 334 aa19.77■□□□□ 0.75
PHRF1-205ENST00000533464 ADD1P35611 737 aaKnown RBP19.77■□□□□ 0.75
PHRF1-205ENST00000533464 NLRP12P59046 1061 aa19.77■□□□□ 0.75
PHRF1-205ENST00000533464 FAM47AQ5JRC9 791 aa19.77■□□□□ 0.75
PHRF1-205ENST00000533464 FCHSD1Q86WN1 690 aa19.77■□□□□ 0.75
PHRF1-205ENST00000533464 MAP4K1Q92918 833 aa19.77■□□□□ 0.75
PHRF1-205ENST00000533464 PLS1Q14651 629 aa19.76■□□□□ 0.75
PHRF1-205ENST00000533464 USP28Q96RU2 1077 aa19.76■□□□□ 0.75
PHRF1-205ENST00000533464 PLCD4Q9BRC7 762 aa19.76■□□□□ 0.75
PHRF1-205ENST00000533464 NOC4LQ9BVI4 516 aaKnown RBP19.76■□□□□ 0.75
PHRF1-205ENST00000533464 PUS3Q9BZE2 481 aaKnown RBP19.76■□□□□ 0.75
PHRF1-205ENST00000533464 RNF187Q5TA31 235 aaPredicted RBP19.76■□□□□ 0.75
PHRF1-205ENST00000533464 IFNL3Q8IZI9 196 aa19.76■□□□□ 0.75
PHRF1-205ENST00000533464 ZNF654Q8IZM8 581 aa19.76■□□□□ 0.75
PHRF1-205ENST00000533464 PFKFB2O60825 505 aa19.76■□□□□ 0.75
PHRF1-205ENST00000533464 GYG1P46976 350 aa19.76■□□□□ 0.75
PHRF1-205ENST00000533464 BCAMP50895 628 aa19.76■□□□□ 0.75
PHRF1-205ENST00000533464 TGFBRAP1Q8WUH2 860 aa19.76■□□□□ 0.75
PHRF1-205ENST00000533464 NAP1L4Q99733 375 aaKnown RBP19.76■□□□□ 0.75
PHRF1-205ENST00000533464 SMC1AQ14683 1233 aaKnown RBP19.75■□□□□ 0.75
PHRF1-205ENST00000533464 CD2BP2O95400 341 aaKnown RBP19.75■□□□□ 0.75
PHRF1-205ENST00000533464 CCDC122Q5T0U0 273 aa19.75■□□□□ 0.75
PHRF1-205ENST00000533464 ASAP1Q9ULH1 1129 aa19.75■□□□□ 0.75
PHRF1-205ENST00000533464 CERS3Q8IU89 383 aa19.75■□□□□ 0.75
PHRF1-205ENST00000533464 GREM2Q9H772 168 aa19.75■□□□□ 0.75
PHRF1-205ENST00000533464 PPP1R2P41236 205 aa19.75■□□□□ 0.75
PHRF1-205ENST00000533464 POSTNQ15063 836 aa19.75■□□□□ 0.75
PHRF1-205ENST00000533464 NONOQ15233 471 aaKnown RBP eCLIP19.75■□□□□ 0.753e-7■■■■□ 23.5
PHRF1-205ENST00000533464 CCDC91Q7Z6B0 441 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms