RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 HDAC1Q13547 482 aaPredicted RBP12□□□□□ -0.49
NUP98-220ENST00000533346 WNK4Q96J92 1243 aa12□□□□□ -0.49
NUP98-220ENST00000533346 ZNF341Q9BYN7 854 aa12□□□□□ -0.49
NUP98-220ENST00000533346 PIH1D3Q9NQM4 214 aaKnown RBP12□□□□□ -0.49
NUP98-220ENST00000533346 SNRKQ9NRH2 765 aa12□□□□□ -0.49
NUP98-220ENST00000533346 SPDYE5A6NIY4 337 aa11.99□□□□□ -0.49
NUP98-220ENST00000533346 MAP3K12Q12852 859 aa11.99□□□□□ -0.49
NUP98-220ENST00000533346 GRM1Q13255 1194 aa11.99□□□□□ -0.49
NUP98-220ENST00000533346 PRKG1Q13976 671 aa11.99□□□□□ -0.49
NUP98-220ENST00000533346 NOL9Q5SY16 702 aaKnown RBP11.99□□□□□ -0.49
NUP98-220ENST00000533346 SH3BP5LQ7L8J4 393 aa11.99□□□□□ -0.49
NUP98-220ENST00000533346 METTL16Q86W50 562 aaKnown RBP11.99□□□□□ -0.49
NUP98-220ENST00000533346 CRBNQ96SW2 442 aa11.99□□□□□ -0.49
NUP98-220ENST00000533346 DDX4Q9NQI0 724 aaKnown RBP11.99□□□□□ -0.49
NUP98-220ENST00000533346 RNF186Q9NXI6 227 aa11.99□□□□□ -0.49
NUP98-220ENST00000533346 FZD1Q9UP38 647 aa11.99□□□□□ -0.49
NUP98-220ENST00000533346 ALDH1A1P00352 501 aa11.98□□□□□ -0.49
NUP98-220ENST00000533346 VGLL4Q14135 290 aa11.98□□□□□ -0.49
NUP98-220ENST00000533346 ADGRA1Q86SQ6 560 aa11.98□□□□□ -0.49
NUP98-220ENST00000533346 ZFPM1Q8IX07 1006 aa11.98□□□□□ -0.49
NUP98-220ENST00000533346 GCC1Q96CN9 775 aa11.98□□□□□ -0.49
NUP98-220ENST00000533346 CLMNQ96JQ2 1002 aa11.98□□□□□ -0.49
NUP98-220ENST00000533346 HAUS7Q99871 368 aa11.98□□□□□ -0.49
NUP98-220ENST00000533346 OSBPL5Q9H0X9 879 aaPredicted RBP11.98□□□□□ -0.49
NUP98-220ENST00000533346 DHX36Q9H2U1 1008 aaKnown RBP11.98□□□□□ -0.49
NUP98-220ENST00000533346 ANTXR1Q9H6X2 564 aa11.98□□□□□ -0.49
NUP98-220ENST00000533346 SIPA1L1O43166 1804 aa11.97□□□□□ -0.49
NUP98-220ENST00000533346 DDTLA6NHG4 134 aaPredicted RBP11.97□□□□□ -0.49
NUP98-220ENST00000533346 PHF20L1A8MW92 1017 aa11.97□□□□□ -0.49
NUP98-220ENST00000533346 GJA5P36382 358 aa11.97□□□□□ -0.49
NUP98-220ENST00000533346 PPATQ06203 517 aa11.97□□□□□ -0.49
NUP98-220ENST00000533346 TCP10Q12799 353 aa11.97□□□□□ -0.49
NUP98-220ENST00000533346 ERO1BQ86YB8 467 aa11.97□□□□□ -0.49
NUP98-220ENST00000533346 MS4A4AQ96JQ5 239 aa11.97□□□□□ -0.49
NUP98-220ENST00000533346 NOL10Q9BSC4 688 aaKnown RBP11.97□□□□□ -0.49
NUP98-220ENST00000533346 ZCCHC17Q9NP64 241 aaKnown RBP11.97□□□□□ -0.49
NUP98-220ENST00000533346 CSADQ9Y600 493 aa11.97□□□□□ -0.49
NUP98-220ENST00000533346 SNCAIPQ9Y6H5 919 aa11.97□□□□□ -0.49
NUP98-220ENST00000533346 MYH1P12882 1939 aa11.97□□□□□ -0.49
NUP98-220ENST00000533346 DOCK1Q14185 1865 aa11.97□□□□□ -0.49
NUP98-220ENST00000533346 PHIPQ8WWQ0 1821 aa11.97□□□□□ -0.49
NUP98-220ENST00000533346 TTC41PQ6P2S7 1318 aa11.96□□□□□ -0.49
NUP98-220ENST00000533346 TCRBV5S4A2TA0A5A2 114 aa11.96□□□□□ -0.49
NUP98-220ENST00000533346 CYP7A1P22680 504 aa11.96□□□□□ -0.49
NUP98-220ENST00000533346 OPTNQ96CV9 577 aa11.96□□□□□ -0.49
NUP98-220ENST00000533346 RIOK1Q9BRS2 568 aaKnown RBP11.96□□□□□ -0.49
NUP98-220ENST00000533346 ECHDC1Q9NTX5 307 aa11.96□□□□□ -0.49
NUP98-220ENST00000533346 AATFQ9NY61 560 aaKnown RBP eCLIP11.96□□□□□ -0.49
NUP98-220ENST00000533346 HERC5Q9UII4 1024 aaKnown RBP11.96□□□□□ -0.49
NUP98-220ENST00000533346 TAOK2Q9UL54 1235 aa11.96□□□□□ -0.49
NUP98-220ENST00000533346 DDX60LQ5H9U9 1706 aaKnown RBP11.95□□□□□ -0.5
NUP98-220ENST00000533346 SALL3Q9BXA9 1300 aa11.95□□□□□ -0.5
NUP98-220ENST00000533346 APBB1O00213 710 aa11.95□□□□□ -0.5
NUP98-220ENST00000533346 CTNND1O60716 968 aaKnown RBP11.95□□□□□ -0.5
NUP98-220ENST00000533346 IDH1O75874 414 aaKnown RBP11.95□□□□□ -0.5
NUP98-220ENST00000533346 GTF2A2P52657 109 aa11.95□□□□□ -0.5
NUP98-220ENST00000533346 PPIL2Q13356 520 aa11.95□□□□□ -0.5
NUP98-220ENST00000533346 UBE3CQ15386 1083 aa11.95□□□□□ -0.5
NUP98-220ENST00000533346 MIGA2Q7L4E1 593 aa11.95□□□□□ -0.5
NUP98-220ENST00000533346 IFNL1Q8IU54 200 aa11.95□□□□□ -0.5
NUP98-220ENST00000533346 FOXP4Q8IVH2 680 aaPredicted RBP11.95□□□□□ -0.5
NUP98-220ENST00000533346 SMC5Q8IY18 1101 aa11.95□□□□□ -0.5
NUP98-220ENST00000533346 TEX11Q8IYF3 940 aa11.95□□□□□ -0.5
NUP98-220ENST00000533346 MAGEB6Q8N7X4 407 aa11.95□□□□□ -0.5
NUP98-220ENST00000533346 SH3RF3Q8TEJ3 882 aaPredicted RBP11.95□□□□□ -0.5
NUP98-220ENST00000533346 WRNIP1Q96S55 665 aa11.95□□□□□ -0.5
NUP98-220ENST00000533346 PAG1Q9NWQ8 432 aa11.95□□□□□ -0.5
NUP98-220ENST00000533346 PI4KBQ9UBF8 816 aa11.95□□□□□ -0.5
NUP98-220ENST00000533346 KCNH4Q9UQ05 1017 aa11.95□□□□□ -0.5
NUP98-220ENST00000533346 CASP8AP2Q9UKL3 1982 aa11.95□□□□□ -0.5
NUP98-220ENST00000533346 PTPRFP10586 1907 aa11.95□□□□□ -0.5
NUP98-220ENST00000533346 ATAD5Q96QE3 1844 aa11.95□□□□□ -0.5
NUP98-220ENST00000533346 SMARCA5O60264 1052 aaPredicted RBP11.94□□□□□ -0.5
NUP98-220ENST00000533346 TRPA1O75762 1119 aa11.94□□□□□ -0.5
NUP98-220ENST00000533346 ADD2P35612 726 aa11.94□□□□□ -0.5
NUP98-220ENST00000533346 OTUD7BQ6GQQ9 843 aa11.94□□□□□ -0.5
NUP98-220ENST00000533346 TICAM2Q86XR7 235 aa11.94□□□□□ -0.5
NUP98-220ENST00000533346 ZKSCAN4Q969J2 545 aaPredicted RBP11.94□□□□□ -0.5
NUP98-220ENST00000533346 TBC1D2Q9BYX2 928 aa11.94□□□□□ -0.5
NUP98-220ENST00000533346 BOLA2Q9H3K6 86 aa11.94□□□□□ -0.5
NUP98-220ENST00000533346 ELP3Q9H9T3 547 aa11.94□□□□□ -0.5
NUP98-220ENST00000533346 GINM1Q9NU53 330 aa11.94□□□□□ -0.5
NUP98-220ENST00000533346 TSKSQ9UJT2 592 aa11.94□□□□□ -0.5
NUP98-220ENST00000533346 NDUFB9Q9Y6M9 179 aa11.94□□□□□ -0.5
NUP98-220ENST00000533346 FLT1P17948 1338 aa11.93□□□□□ -0.5
NUP98-220ENST00000533346 CCDC85CA6NKD9 419 aa11.93□□□□□ -0.5
NUP98-220ENST00000533346 GOLIM4O00461 696 aa11.93□□□□□ -0.5
NUP98-220ENST00000533346 CXCL11O14625 94 aa11.93□□□□□ -0.5
NUP98-220ENST00000533346 PDE6AP16499 860 aa11.93□□□□□ -0.5
NUP98-220ENST00000533346 INPP5BP32019 993 aa11.93□□□□□ -0.5
NUP98-220ENST00000533346 PICALMQ13492 652 aa11.93□□□□□ -0.5
NUP98-220ENST00000533346 SLC9C2Q5TAH2 1124 aa11.93□□□□□ -0.5
NUP98-220ENST00000533346 ZSCAN25Q6NSZ9 544 aa11.93□□□□□ -0.5
NUP98-220ENST00000533346 SCYL3Q8IZE3 742 aa11.93□□□□□ -0.5
NUP98-220ENST00000533346 GPATCH3Q96I76 525 aa11.93□□□□□ -0.5
NUP98-220ENST00000533346 PTPN18Q99952 460 aa11.93□□□□□ -0.5
NUP98-220ENST00000533346 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.93□□□□□ -0.5
NUP98-220ENST00000533346 EHD4Q9H223 541 aa11.93□□□□□ -0.5
NUP98-220ENST00000533346 ZNF532Q9HCE3 1301 aa11.92□□□□□ -0.5
NUP98-220ENST00000533346 IGF2BP3O00425 579 aaKnown RBP eCLIP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms