RNA–Protein interactions for RNA: ENST00000533110.5

CTSB-227, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 399 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-227ENST00000533110 CDX2Q99626 313 aaPredicted RBP11.65□□□□□ -0.54
CTSB-227ENST00000533110 PFASO15067 1338 aa11.64□□□□□ -0.55
CTSB-227ENST00000533110 MROH5Q6ZUA9 1318 aa11.64□□□□□ -0.55
CTSB-227ENST00000533110 TRIM75PA6NK02 468 aa11.64□□□□□ -0.55
CTSB-227ENST00000533110 APAF1O14727 1248 aa11.64□□□□□ -0.55
CTSB-227ENST00000533110 TWISTNBQ3B726 338 aaPredicted RBP11.64□□□□□ -0.55
CTSB-227ENST00000533110 FBXO33Q7Z6M2 555 aa11.64□□□□□ -0.55
CTSB-227ENST00000533110 TSR2Q969E8 191 aaKnown RBP11.64□□□□□ -0.55
CTSB-227ENST00000533110 AGTPBP1Q9UPW5 1226 aa11.64□□□□□ -0.55
CTSB-227ENST00000533110 COL2A1P02458 1487 aaPredicted RBP11.63□□□□□ -0.55
CTSB-227ENST00000533110 PTPRAP18433 802 aa11.63□□□□□ -0.55
CTSB-227ENST00000533110 TRIM32Q13049 653 aa11.63□□□□□ -0.55
CTSB-227ENST00000533110 PRKAG2Q9UGJ0 569 aa11.63□□□□□ -0.55
CTSB-227ENST00000533110 LRRFIP2Q9Y608 721 aaKnown RBP11.63□□□□□ -0.55
CTSB-227ENST00000533110 GRM8O00222 908 aa11.62□□□□□ -0.55
CTSB-227ENST00000533110 PRKAR2AP13861 404 aaKnown RBP11.62□□□□□ -0.55
CTSB-227ENST00000533110 FOSL2P15408 326 aa11.62□□□□□ -0.55
CTSB-227ENST00000533110 GCLCP48506 637 aaPredicted RBP11.62□□□□□ -0.55
CTSB-227ENST00000533110 NFIAQ12857 509 aa11.62□□□□□ -0.55
CTSB-227ENST00000533110 LRRC26Q2I0M4 334 aa11.62□□□□□ -0.55
CTSB-227ENST00000533110 METTL24Q5JXM2 366 aa11.62□□□□□ -0.55
CTSB-227ENST00000533110 EPHA10Q5JZY3 1008 aa11.62□□□□□ -0.55
CTSB-227ENST00000533110 CDC42EP5Q6NZY7 148 aa11.62□□□□□ -0.55
CTSB-227ENST00000533110 ZSCAN29Q8IWY8 852 aaPredicted RBP11.62□□□□□ -0.55
CTSB-227ENST00000533110 TRIB2Q92519 343 aa11.62□□□□□ -0.55
CTSB-227ENST00000533110 PUS3Q9BZE2 481 aaKnown RBP11.62□□□□□ -0.55
CTSB-227ENST00000533110 AFG3L2Q9Y4W6 797 aa11.62□□□□□ -0.55
CTSB-227ENST00000533110 SPTBN5Q9NRC6 3674 aaKnown RBP11.62□□□□□ -0.55
CTSB-227ENST00000533110 TNFRSF10AO00220 468 aa11.61□□□□□ -0.55
CTSB-227ENST00000533110 COL6A1P12109 1028 aa11.61□□□□□ -0.55
CTSB-227ENST00000533110 PABPC4Q13310 644 aaKnown RBP eCLIP11.61□□□□□ -0.55
CTSB-227ENST00000533110 WDR66Q8TBY9 1149 aa11.61□□□□□ -0.55
CTSB-227ENST00000533110 MYLIPQ8WY64 445 aa11.61□□□□□ -0.55
CTSB-227ENST00000533110 C9orf78Q9NZ63 289 aaPredicted RBP11.61□□□□□ -0.55
CTSB-227ENST00000533110 DAGLAQ9Y4D2 1042 aa11.61□□□□□ -0.55
CTSB-227ENST00000533110 PHF20L1A8MW92 1017 aa11.6□□□□□ -0.55
CTSB-227ENST00000533110 ZKSCAN1P17029 563 aaPredicted RBP11.6□□□□□ -0.55
CTSB-227ENST00000533110 CYP2B6P20813 491 aa11.6□□□□□ -0.55
CTSB-227ENST00000533110 TJAP1Q5JTD0 557 aa11.6□□□□□ -0.55
CTSB-227ENST00000533110 TREML2Q5T2D2 321 aa11.6□□□□□ -0.55
CTSB-227ENST00000533110 MAP3K21Q5TCX8 1036 aa11.6□□□□□ -0.55
CTSB-227ENST00000533110 SOCS4Q8WXH5 440 aa11.6□□□□□ -0.55
CTSB-227ENST00000533110 FAM122AQ96E09 287 aa11.6□□□□□ -0.55
CTSB-227ENST00000533110 SEMA6BQ9H3T3 888 aa11.6□□□□□ -0.55
CTSB-227ENST00000533110 USP40Q9NVE5 1235 aa11.6□□□□□ -0.55
CTSB-227ENST00000533110 FAM198AQ9UFP1 575 aa11.6□□□□□ -0.55
CTSB-227ENST00000533110 ATRNL1Q5VV63 1379 aa11.59□□□□□ -0.55
CTSB-227ENST00000533110 TTC28Q96AY4 2481 aa11.59□□□□□ -0.55
CTSB-227ENST00000533110 TMEM265A0A087WTH1 108 aa11.59□□□□□ -0.55
CTSB-227ENST00000533110 CTNND1O60716 968 aaKnown RBP11.59□□□□□ -0.55
CTSB-227ENST00000533110 IFIT1P09914 478 aaKnown RBP11.59□□□□□ -0.55
CTSB-227ENST00000533110 PLA2G5P39877 138 aa11.59□□□□□ -0.55
CTSB-227ENST00000533110 PDE3AQ14432 1141 aa11.59□□□□□ -0.55
CTSB-227ENST00000533110 DIXDC1Q155Q3 683 aa11.59□□□□□ -0.55
CTSB-227ENST00000533110 BEND3Q5T5X7 828 aa11.59□□□□□ -0.55
CTSB-227ENST00000533110 TRMT44Q8IYL2 757 aaKnown RBP11.59□□□□□ -0.55
CTSB-227ENST00000533110 PROCA1Q8NCQ7 364 aaPredicted RBP11.59□□□□□ -0.55
CTSB-227ENST00000533110 NUDT12Q9BQG2 462 aa11.59□□□□□ -0.55
CTSB-227ENST00000533110 GJD2Q9UKL4 321 aa11.59□□□□□ -0.55
CTSB-227ENST00000533110 EYSQ5T1H1 3165 aa11.58□□□□□ -0.56
CTSB-227ENST00000533110 F6X3S4 739 aa11.58□□□□□ -0.56
CTSB-227ENST00000533110 PDE8BO95263 885 aa11.58□□□□□ -0.56
CTSB-227ENST00000533110 RGS3P49796 1198 aa11.58□□□□□ -0.56
CTSB-227ENST00000533110 CCAR1Q8IX12 1150 aaKnown RBP11.58□□□□□ -0.56
CTSB-227ENST00000533110 SPINK5Q9NQ38 1064 aaPredicted RBP11.58□□□□□ -0.56
CTSB-227ENST00000533110 AK9Q5TCS8 1911 aa11.58□□□□□ -0.56
CTSB-227ENST00000533110 KIF16BQ96L93 1317 aa11.58□□□□□ -0.56
CTSB-227ENST00000533110 ENTPD3O75355 529 aa11.57□□□□□ -0.56
CTSB-227ENST00000533110 XRCC5P13010 732 aaKnown RBP11.57□□□□□ -0.56
CTSB-227ENST00000533110 PUM3Q15397 648 aaKnown RBP11.57□□□□□ -0.56
CTSB-227ENST00000533110 CCDC84Q86UT8 332 aaPredicted RBP11.57□□□□□ -0.56
CTSB-227ENST00000533110 ZFPM1Q8IX07 1006 aa11.57□□□□□ -0.56
CTSB-227ENST00000533110 SENP6Q9GZR1 1112 aaPredicted RBP11.57□□□□□ -0.56
CTSB-227ENST00000533110 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.57□□□□□ -0.56
CTSB-227ENST00000533110 RAPGEFL1Q9UHV5 662 aa11.57□□□□□ -0.56
CTSB-227ENST00000533110 DOCK2Q92608 1830 aa11.56□□□□□ -0.56
CTSB-227ENST00000533110 LDHBP07195 334 aaKnown RBP11.56□□□□□ -0.56
CTSB-227ENST00000533110 PRDX5P30044 214 aa11.56□□□□□ -0.56
CTSB-227ENST00000533110 ATN1P54259 1190 aaPredicted RBP11.56□□□□□ -0.56
CTSB-227ENST00000533110 IRX3P78415 501 aaPredicted RBP11.56□□□□□ -0.56
CTSB-227ENST00000533110 SMAD3P84022 425 aaKnown RBP11.56□□□□□ -0.56
CTSB-227ENST00000533110 CACNB2Q08289 660 aaPredicted RBP11.56□□□□□ -0.56
CTSB-227ENST00000533110 ASCC2Q9H1I8 757 aaPredicted RBP11.56□□□□□ -0.56
CTSB-227ENST00000533110 CWC22Q9HCG8 908 aaKnown RBP11.56□□□□□ -0.56
CTSB-227ENST00000533110 DOCK1Q14185 1865 aa11.55□□□□□ -0.56
CTSB-227ENST00000533110 ALDH1L1O75891 902 aa11.55□□□□□ -0.56
CTSB-227ENST00000533110 SLC5A1P13866 664 aa11.55□□□□□ -0.56
CTSB-227ENST00000533110 CCND3P30281 292 aaPredicted RBP11.55□□□□□ -0.56
CTSB-227ENST00000533110 RGS2P41220 211 aa11.55□□□□□ -0.56
CTSB-227ENST00000533110 HMGCS2P54868 508 aa11.55□□□□□ -0.56
CTSB-227ENST00000533110 SPP2Q13103 211 aa11.55□□□□□ -0.56
CTSB-227ENST00000533110 SHHQ15465 462 aa11.55□□□□□ -0.56
CTSB-227ENST00000533110 LRRC24Q50LG9 513 aa11.55□□□□□ -0.56
CTSB-227ENST00000533110 LHX8Q68G74 356 aa11.55□□□□□ -0.56
CTSB-227ENST00000533110 VGLL2Q8N8G2 317 aa11.55□□□□□ -0.56
CTSB-227ENST00000533110 ZNF280CQ8ND82 737 aa11.55□□□□□ -0.56
CTSB-227ENST00000533110 SUCLG2Q96I99 432 aa11.55□□□□□ -0.56
CTSB-227ENST00000533110 IDI2Q9BXS1 227 aa11.55□□□□□ -0.56
CTSB-227ENST00000533110 TBC1D2Q9BYX2 928 aa11.55□□□□□ -0.56
CTSB-227ENST00000533110 TTYH1Q9H313 450 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms