RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 LPIN2Q92539 896 aa15.58■□□□□ 0.08
CAPN1-223ENST00000533079 COA7Q96BR5 231 aa15.58■□□□□ 0.08
CAPN1-223ENST00000533079 GDF15Q99988 308 aa15.58■□□□□ 0.08
CAPN1-223ENST00000533079 SALL1Q9NSC2 1324 aa15.58■□□□□ 0.08
CAPN1-223ENST00000533079 ALPK3Q96L96 1907 aa15.58■□□□□ 0.08
CAPN1-223ENST00000533079 A0A0C4DFX4 3053 aa15.58■□□□□ 0.08
CAPN1-223ENST00000533079 SLC5A1P13866 664 aa15.57■□□□□ 0.08
CAPN1-223ENST00000533079 ELNP15502 786 aa15.57■□□□□ 0.08
CAPN1-223ENST00000533079 PTPRAP18433 802 aa15.57■□□□□ 0.08
CAPN1-223ENST00000533079 NFIAQ12857 509 aa15.57■□□□□ 0.08
CAPN1-223ENST00000533079 ANKRD44Q8N8A2 993 aa15.57■□□□□ 0.08
CAPN1-223ENST00000533079 FAM198AQ9UFP1 575 aa15.57■□□□□ 0.08
CAPN1-223ENST00000533079 STAP2Q9UGK3 403 aa15.57■□□□□ 0.08
CAPN1-223ENST00000533079 PNMA3Q9UL41 463 aa15.57■□□□□ 0.08
CAPN1-223ENST00000533079 AFG3L2Q9Y4W6 797 aa15.57■□□□□ 0.08
CAPN1-223ENST00000533079 RFX7Q2KHR2 1363 aa15.57■□□□□ 0.08
CAPN1-223ENST00000533079 LOC285556D6RIA3 1793 aa15.57■□□□□ 0.08
CAPN1-223ENST00000533079 UNC80Q8N2C7 3258 aa15.56■□□□□ 0.08
CAPN1-223ENST00000533079 PHF20L1A8MW92 1017 aa15.56■□□□□ 0.08
CAPN1-223ENST00000533079 ZBTB22O15209 634 aa15.56■□□□□ 0.08
CAPN1-223ENST00000533079 ENTPD3O75355 529 aa15.56■□□□□ 0.08
CAPN1-223ENST00000533079 FAM110CQ1W6H9 321 aa15.56■□□□□ 0.08
CAPN1-223ENST00000533079 LRIT3Q3SXY7 679 aa15.56■□□□□ 0.08
CAPN1-223ENST00000533079 GADL1Q6ZQY3 521 aa15.56■□□□□ 0.08
CAPN1-223ENST00000533079 PAWRQ96IZ0 340 aaKnown RBP15.56■□□□□ 0.08
CAPN1-223ENST00000533079 IDI2Q9BXS1 227 aa15.56■□□□□ 0.08
CAPN1-223ENST00000533079 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.56■□□□□ 0.08
CAPN1-223ENST00000533079 AGTPBP1Q9UPW5 1226 aa15.56■□□□□ 0.08
CAPN1-223ENST00000533079 STXBP5LQ9Y2K9 1186 aa15.56■□□□□ 0.08
CAPN1-223ENST00000533079 ZHX2Q9Y6X8 837 aa15.56■□□□□ 0.08
CAPN1-223ENST00000533079 PHIPQ8WWQ0 1821 aa15.56■□□□□ 0.08
CAPN1-223ENST00000533079 AK9Q5TCS8 1911 aa15.55■□□□□ 0.08
CAPN1-223ENST00000533079 SEMA3EO15041 775 aa15.55■□□□□ 0.08
CAPN1-223ENST00000533079 LDHBP07195 334 aaKnown RBP15.55■□□□□ 0.08
CAPN1-223ENST00000533079 PRDX5P30044 214 aa15.55■□□□□ 0.08
CAPN1-223ENST00000533079 MAP3K10Q02779 954 aa15.55■□□□□ 0.08
CAPN1-223ENST00000533079 DIXDC1Q155Q3 683 aa15.55■□□□□ 0.08
CAPN1-223ENST00000533079 CTNND1O60716 968 aaKnown RBP15.54■□□□□ 0.08
CAPN1-223ENST00000533079 HMGCRP04035 888 aa15.54■□□□□ 0.08
CAPN1-223ENST00000533079 MIER1Q8N108 512 aa15.54■□□□□ 0.08
CAPN1-223ENST00000533079 ZGPATQ8N5A5 531 aaKnown RBP15.54■□□□□ 0.08
CAPN1-223ENST00000533079 DEFB123Q8N688 67 aa15.54■□□□□ 0.08
CAPN1-223ENST00000533079 USP40Q9NVE5 1235 aa15.54■□□□□ 0.08
CAPN1-223ENST00000533079 GNL3LQ9NVN8 582 aaKnown RBP15.54■□□□□ 0.08
CAPN1-223ENST00000533079 DDX60LQ5H9U9 1706 aaKnown RBP15.54■□□□□ 0.08
CAPN1-223ENST00000533079 GAKO14976 1311 aa15.53■□□□□ 0.08
CAPN1-223ENST00000533079 PTPRCP08575 1304 aa15.53■□□□□ 0.08
CAPN1-223ENST00000533079 TDHQ8IZJ6 230 aa15.53■□□□□ 0.08
CAPN1-223ENST00000533079 PROCA1Q8NCQ7 364 aaPredicted RBP15.53■□□□□ 0.08
CAPN1-223ENST00000533079 TBC1D2Q9BYX2 928 aa15.53■□□□□ 0.08
CAPN1-223ENST00000533079 FBXO3Q9UK99 471 aa15.53■□□□□ 0.08
CAPN1-223ENST00000533079 LRRFIP2Q9Y608 721 aaKnown RBP15.53■□□□□ 0.08
CAPN1-223ENST00000533079 RPTORQ8N122 1335 aa15.52■□□□□ 0.08
CAPN1-223ENST00000533079 EYA2O00167 538 aa15.52■□□□□ 0.08
CAPN1-223ENST00000533079 GCLCP48506 637 aaPredicted RBP15.52■□□□□ 0.08
CAPN1-223ENST00000533079 RGS3P49796 1198 aa15.52■□□□□ 0.08
CAPN1-223ENST00000533079 SLF2Q8IX21 1173 aa15.52■□□□□ 0.08
CAPN1-223ENST00000533079 C7orf61Q8IZ16 206 aa15.52■□□□□ 0.08
CAPN1-223ENST00000533079 NBPF3Q9H094 633 aa15.52■□□□□ 0.08
CAPN1-223ENST00000533079 SPINK5Q9NQ38 1064 aaPredicted RBP15.52■□□□□ 0.08
CAPN1-223ENST00000533079 DENND2AQ9ULE3 1009 aa15.52■□□□□ 0.08
CAPN1-223ENST00000533079 COL2A1P02458 1487 aaPredicted RBP15.52■□□□□ 0.07
CAPN1-223ENST00000533079 PABPC4Q13310 644 aaKnown RBP eCLIP15.51■□□□□ 0.07
CAPN1-223ENST00000533079 CCDC184Q52MB2 194 aa15.51■□□□□ 0.07
CAPN1-223ENST00000533079 ZSCAN29Q8IWY8 852 aaPredicted RBP15.51■□□□□ 0.07
CAPN1-223ENST00000533079 ANKRD13CQ8N6S4 541 aa15.51■□□□□ 0.07
CAPN1-223ENST00000533079 KLHDC4Q8TBB5 520 aa15.51■□□□□ 0.07
CAPN1-223ENST00000533079 DIS3LQ8TF46 1054 aaKnown RBP15.51■□□□□ 0.07
CAPN1-223ENST00000533079 HMX1Q9NP08 348 aaPredicted RBP15.51■□□□□ 0.07
CAPN1-223ENST00000533079 TAOK2Q9UL54 1235 aa15.51■□□□□ 0.07
CAPN1-223ENST00000533079 PDS5AQ29RF7 1337 aaKnown RBP15.5■□□□□ 0.07
CAPN1-223ENST00000533079 TRIM75PA6NK02 468 aa15.5■□□□□ 0.07
CAPN1-223ENST00000533079 ZFPM1Q8IX07 1006 aa15.5■□□□□ 0.07
CAPN1-223ENST00000533079 C11orf49Q9H6J7 331 aa15.5■□□□□ 0.07
CAPN1-223ENST00000533079 TBC1D12O60347 775 aa15.49■□□□□ 0.07
CAPN1-223ENST00000533079 CIAO1O76071 339 aa15.49■□□□□ 0.07
CAPN1-223ENST00000533079 RFX5P48382 616 aaPredicted RBP15.49■□□□□ 0.07
CAPN1-223ENST00000533079 ATP2B3Q16720 1220 aa15.49■□□□□ 0.07
CAPN1-223ENST00000533079 OGDHLQ9ULD0 1010 aa15.49■□□□□ 0.07
CAPN1-223ENST00000533079 MYH2Q9UKX2 1941 aa15.49■□□□□ 0.07
CAPN1-223ENST00000533079 NPM3O75607 178 aaKnown RBP15.48■□□□□ 0.07
CAPN1-223ENST00000533079 MAGEA10P43363 369 aaPredicted RBP15.48■□□□□ 0.07
CAPN1-223ENST00000533079 TREML2Q5T2D2 321 aa15.48■□□□□ 0.07
CAPN1-223ENST00000533079 SH3BP5LQ7L8J4 393 aa15.48■□□□□ 0.07
CAPN1-223ENST00000533079 DZIP1Q86YF9 867 aaKnown RBP15.48■□□□□ 0.07
CAPN1-223ENST00000533079 FAM163AQ96GL9 167 aaPredicted RBP15.48■□□□□ 0.07
CAPN1-223ENST00000533079 OSBPL5Q9H0X9 879 aaPredicted RBP15.48■□□□□ 0.07
CAPN1-223ENST00000533079 MTMR10Q9NXD2 777 aa15.48■□□□□ 0.07
CAPN1-223ENST00000533079 ZMYND8Q9ULU4 1186 aaPredicted RBP15.48■□□□□ 0.07
CAPN1-223ENST00000533079 ATAD5Q96QE3 1844 aa15.47■□□□□ 0.07
CAPN1-223ENST00000533079 DDTLA6NHG4 134 aaPredicted RBP15.47■□□□□ 0.07
CAPN1-223ENST00000533079 ATG9AQ7Z3C6 839 aa15.47■□□□□ 0.07
CAPN1-223ENST00000533079 SOCS4Q8WXH5 440 aa15.47■□□□□ 0.07
CAPN1-223ENST00000533079 USP44Q9H0E7 712 aa15.47■□□□□ 0.07
CAPN1-223ENST00000533079 SALL2Q9Y467 1007 aaPredicted RBP15.47■□□□□ 0.07
CAPN1-223ENST00000533079 MROH7-TTC4A0A0A0MT08 1334 aa15.46■□□□□ 0.07
CAPN1-223ENST00000533079 PLXNB2O15031 1838 aa15.46■□□□□ 0.07
CAPN1-223ENST00000533079 MAP4K4O95819 1239 aaPredicted RBP15.46■□□□□ 0.07
CAPN1-223ENST00000533079 MAP3K21Q5TCX8 1036 aa15.46■□□□□ 0.07
CAPN1-223ENST00000533079 SPTY2D1Q68D10 685 aaPredicted RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms