RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 EDC3Q96F86 508 aaKnown RBP7.73□□□□□ -1.17
TGFBR3-209ENST00000532540 CALR3Q96L12 384 aaKnown RBP7.73□□□□□ -1.17
TGFBR3-209ENST00000532540 MAP2P11137 1827 aaKnown RBP7.73□□□□□ -1.17
TGFBR3-209ENST00000532540 ZNF827Q17R98 1081 aa7.73□□□□□ -1.17
TGFBR3-209ENST00000532540 CEP85LQ5SZL2 805 aa7.73□□□□□ -1.17
TGFBR3-209ENST00000532540 ISM2Q6H9L7 571 aa7.73□□□□□ -1.17
TGFBR3-209ENST00000532540 CWC27Q6UX04 472 aaKnown RBP7.73□□□□□ -1.17
TGFBR3-209ENST00000532540 NLRP10Q86W26 655 aa7.73□□□□□ -1.17
TGFBR3-209ENST00000532540 ZSCAN29Q8IWY8 852 aaPredicted RBP7.73□□□□□ -1.17
TGFBR3-209ENST00000532540 NLGN1Q8N2Q7 840 aa7.73□□□□□ -1.17
TGFBR3-209ENST00000532540 KIF1BPQ96EK5 621 aa7.73□□□□□ -1.17
TGFBR3-209ENST00000532540 TACO1Q9BSH4 297 aaKnown RBP7.73□□□□□ -1.17
TGFBR3-209ENST00000532540 IFT172Q9UG01 1749 aa7.73□□□□□ -1.17
TGFBR3-209ENST00000532540 CTAGE15A4D2H0 777 aa7.73□□□□□ -1.17
TGFBR3-209ENST00000532540 C21orf2O43822 256 aa7.73□□□□□ -1.17
TGFBR3-209ENST00000532540 CTAGE8P0CG41 777 aa7.73□□□□□ -1.17
TGFBR3-209ENST00000532540 ARHGAP25P42331 645 aa7.73□□□□□ -1.17
TGFBR3-209ENST00000532540 NOP2P46087 812 aaKnown RBP7.73□□□□□ -1.17
TGFBR3-209ENST00000532540 IRX1P78414 480 aaPredicted RBP7.73□□□□□ -1.17
TGFBR3-209ENST00000532540 RRP12Q5JTH9 1297 aaKnown RBP7.73□□□□□ -1.17
TGFBR3-209ENST00000532540 SYNE3Q6ZMZ3 975 aa7.73□□□□□ -1.17
TGFBR3-209ENST00000532540 CTAGE6Q86UF2 777 aa7.73□□□□□ -1.17
TGFBR3-209ENST00000532540 CCDC50Q8IVM0 306 aa7.73□□□□□ -1.17
TGFBR3-209ENST00000532540 CTAGE4Q8IX94 777 aa7.73□□□□□ -1.17
TGFBR3-209ENST00000532540 XRN1Q8IZH2 1706 aaKnown RBP7.73□□□□□ -1.17
TGFBR3-209ENST00000532540 KDM6AO15550 1401 aaPredicted RBP7.73□□□□□ -1.17
TGFBR3-209ENST00000532540 NDUFAB1O14561 156 aa7.72□□□□□ -1.17
TGFBR3-209ENST00000532540 PPFIA4O75335 1185 aa7.72□□□□□ -1.17
TGFBR3-209ENST00000532540 UFL1O94874 794 aa7.72□□□□□ -1.17
TGFBR3-209ENST00000532540 SLC15A2Q16348 729 aa7.72□□□□□ -1.17
TGFBR3-209ENST00000532540 HSP90AB4PQ58FF6 505 aa7.72□□□□□ -1.17
TGFBR3-209ENST00000532540 CEP85Q6P2H3 762 aa7.72□□□□□ -1.17
TGFBR3-209ENST00000532540 CNTROBQ8N137 903 aa7.72□□□□□ -1.17
TGFBR3-209ENST00000532540 AOPEPQ8N6M6 819 aa7.72□□□□□ -1.17
TGFBR3-209ENST00000532540 JAKMIP1Q96N16 626 aaKnown RBP7.72□□□□□ -1.17
TGFBR3-209ENST00000532540 PDE11AQ9HCR9 933 aa7.72□□□□□ -1.17
TGFBR3-209ENST00000532540 BCL9LQ86UU0 1499 aa7.72□□□□□ -1.17
TGFBR3-209ENST00000532540 STK38Q15208 465 aa7.72□□□□□ -1.17
TGFBR3-209ENST00000532540 ANKRD1Q15327 319 aa7.72□□□□□ -1.17
TGFBR3-209ENST00000532540 IQCEQ6IPM2 695 aa7.72□□□□□ -1.17
TGFBR3-209ENST00000532540 CNNM3Q8NE01 707 aa7.72□□□□□ -1.17
TGFBR3-209ENST00000532540 LARP6Q9BRS8 491 aaKnown RBP7.72□□□□□ -1.17
TGFBR3-209ENST00000532540 ZC3H12CQ9C0D7 883 aaKnown RBP7.72□□□□□ -1.17
TGFBR3-209ENST00000532540 KCNF1Q9H3M0 494 aa7.72□□□□□ -1.17
TGFBR3-209ENST00000532540 EPB41L2O43491 1005 aaKnown RBP7.72□□□□□ -1.17
TGFBR3-209ENST00000532540 IFIT1P09914 478 aaKnown RBP7.72□□□□□ -1.17
TGFBR3-209ENST00000532540 ATP2B2Q01814 1243 aa7.72□□□□□ -1.17
TGFBR3-209ENST00000532540 AMIGO3Q86WK7 504 aa7.72□□□□□ -1.17
TGFBR3-209ENST00000532540 RHPN1Q8TCX5 695 aa7.72□□□□□ -1.17
TGFBR3-209ENST00000532540 GNL3LQ9NVN8 582 aaKnown RBP7.72□□□□□ -1.17
TGFBR3-209ENST00000532540 IRAK4Q9NWZ3 460 aa7.72□□□□□ -1.17
TGFBR3-209ENST00000532540 ORC3Q9UBD5 711 aaPredicted RBP7.72□□□□□ -1.17
TGFBR3-209ENST00000532540 ZNF142P52746 1687 aaPredicted RBP7.72□□□□□ -1.17
TGFBR3-209ENST00000532540 WDHD1O75717 1129 aaPredicted RBP7.71□□□□□ -1.17
TGFBR3-209ENST00000532540 ALDH1L1O75891 902 aa7.71□□□□□ -1.17
TGFBR3-209ENST00000532540 RHOXF2BP0C7M4 288 aa7.71□□□□□ -1.17
TGFBR3-209ENST00000532540 LONRF2Q1L5Z9 754 aa7.71□□□□□ -1.17
TGFBR3-209ENST00000532540 INTS5Q6P9B9 1019 aaKnown RBP7.71□□□□□ -1.17
TGFBR3-209ENST00000532540 CCDC121Q6ZUS5 278 aa7.71□□□□□ -1.17
TGFBR3-209ENST00000532540 PLEKHM2Q8IWE5 1019 aa7.71□□□□□ -1.17
TGFBR3-209ENST00000532540 RPUSD2Q8IZ73 545 aaKnown RBP7.71□□□□□ -1.17
TGFBR3-209ENST00000532540 FAM71BQ8TC56 605 aa7.71□□□□□ -1.17
TGFBR3-209ENST00000532540 RHOXF2Q9BQY4 288 aa7.71□□□□□ -1.17
TGFBR3-209ENST00000532540 NYXQ9GZU5 481 aa7.71□□□□□ -1.17
TGFBR3-209ENST00000532540 PUF60Q9UHX1 559 aaKnown RBP7.71□□□□□ -1.17
TGFBR3-209ENST00000532540 COL15A1P39059 1388 aa7.71□□□□□ -1.17
TGFBR3-209ENST00000532540 STRCP1A6NGW2 1772 aa7.71□□□□□ -1.17
TGFBR3-209ENST00000532540 LRP6O75581 1613 aa7.71□□□□□ -1.17
TGFBR3-209ENST00000532540 ITSN1Q15811 1721 aa7.71□□□□□ -1.17
TGFBR3-209ENST00000532540 PPFIA3O75145 1194 aa7.71□□□□□ -1.17
TGFBR3-209ENST00000532540 CYP2E1P05181 493 aaPredicted RBP7.71□□□□□ -1.17
TGFBR3-209ENST00000532540 SSBP05455 408 aaKnown RBP eCLIP7.71□□□□□ -1.17
TGFBR3-209ENST00000532540 CHMP4BP1P59074 171 aa7.71□□□□□ -1.17
TGFBR3-209ENST00000532540 CAVIN4Q5BKX8 364 aa7.71□□□□□ -1.17
TGFBR3-209ENST00000532540 PSMD1Q99460 953 aa7.71□□□□□ -1.17
TGFBR3-209ENST00000532540 IMPACTQ9P2X3 320 aa7.71□□□□□ -1.17
TGFBR3-209ENST00000532540 PHLPP1O60346 1717 aa7.71□□□□□ -1.18
TGFBR3-209ENST00000532540 GYG1P46976 350 aa7.71□□□□□ -1.18
TGFBR3-209ENST00000532540 RPS8P62241 208 aaKnown RBP7.71□□□□□ -1.18
TGFBR3-209ENST00000532540 NBPF20Q3BBV1 942 aa7.71□□□□□ -1.18
TGFBR3-209ENST00000532540 FILIP1LQ4L180 1135 aa7.71□□□□□ -1.18
TGFBR3-209ENST00000532540 MRFAP1L1Q96HT8 127 aa7.71□□□□□ -1.18
TGFBR3-209ENST00000532540 CHUKO15111 745 aa7.71□□□□□ -1.18
TGFBR3-209ENST00000532540 PDE8AO60658 829 aa7.71□□□□□ -1.18
TGFBR3-209ENST00000532540 HOXB7P09629 217 aa7.71□□□□□ -1.18
TGFBR3-209ENST00000532540 CCT5P48643 541 aa7.71□□□□□ -1.18
TGFBR3-209ENST00000532540 ATRIPQ8WXE1 791 aa7.71□□□□□ -1.18
TGFBR3-209ENST00000532540 CNKSR2Q8WXI2 1034 aa7.71□□□□□ -1.18
TGFBR3-209ENST00000532540 RABGGTAQ92696 567 aa7.71□□□□□ -1.18
TGFBR3-209ENST00000532540 DBNDD2Q9BQY9 259 aa7.71□□□□□ -1.18
TGFBR3-209ENST00000532540 NARFQ9UHQ1 456 aa7.71□□□□□ -1.18
TGFBR3-209ENST00000532540 FAN1Q9Y2M0 1017 aa7.71□□□□□ -1.18
TGFBR3-209ENST00000532540 DTNBO60941 627 aa7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 STK3Q13188 491 aa7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 PRKG1Q13976 671 aa7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 NKX1-1Q15270 411 aaPredicted RBP7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 ARMC2Q8NEN0 867 aa7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 MICAL1Q8TDZ2 1067 aa7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 IFNKQ9P0W0 207 aa7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 SCAF8Q9UPN6 1271 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms