RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 NPM3O75607 178 aaKnown RBP16.13■□□□□ 0.17
SF3B2-212ENST00000531589 KIF22Q14807 665 aa16.13■□□□□ 0.17
SF3B2-212ENST00000531589 ZFPM1Q8IX07 1006 aa16.13■□□□□ 0.17
SF3B2-212ENST00000531589 NSUN4Q96CB9 384 aaKnown RBP16.13■□□□□ 0.17
SF3B2-212ENST00000531589 C1orf115Q9H7X2 142 aa16.13■□□□□ 0.17
SF3B2-212ENST00000531589 PICK1Q9NRD5 415 aa16.13■□□□□ 0.17
SF3B2-212ENST00000531589 PTPN22Q9Y2R2 807 aa16.13■□□□□ 0.17
SF3B2-212ENST00000531589 NOP58Q9Y2X3 529 aaKnown RBP16.13■□□□□ 0.17
SF3B2-212ENST00000531589 BTBD19C9JJ37 291 aa16.12■□□□□ 0.17
SF3B2-212ENST00000531589 TLR2O60603 784 aa16.12■□□□□ 0.17
SF3B2-212ENST00000531589 MCAMP43121 646 aa16.12■□□□□ 0.17
SF3B2-212ENST00000531589 PICALMQ13492 652 aa16.12■□□□□ 0.17
SF3B2-212ENST00000531589 PI16Q6UXB8 463 aa16.12■□□□□ 0.17
SF3B2-212ENST00000531589 TBC1D9Q6ZT07 1266 aa16.12■□□□□ 0.17
SF3B2-212ENST00000531589 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.12■□□□□ 0.17
SF3B2-212ENST00000531589 ZNF512BQ96KM6 892 aaPredicted RBP16.12■□□□□ 0.17
SF3B2-212ENST00000531589 KCNH4Q9UQ05 1017 aa16.12■□□□□ 0.17
SF3B2-212ENST00000531589 CXCL11O14625 94 aa16.11■□□□□ 0.17
SF3B2-212ENST00000531589 BAG3O95817 575 aa16.11■□□□□ 0.17
SF3B2-212ENST00000531589 RLBP1P12271 317 aa16.11■□□□□ 0.17
SF3B2-212ENST00000531589 MAP3K10Q02779 954 aa16.11■□□□□ 0.17
SF3B2-212ENST00000531589 ANKRD23Q86SG2 305 aa16.11■□□□□ 0.17
SF3B2-212ENST00000531589 SCYL3Q8IZE3 742 aa16.11■□□□□ 0.17
SF3B2-212ENST00000531589 MYH2Q9UKX2 1941 aa16.11■□□□□ 0.17
SF3B2-212ENST00000531589 RFX7Q2KHR2 1363 aa16.11■□□□□ 0.17
SF3B2-212ENST00000531589 CTNND1O60716 968 aaKnown RBP16.1■□□□□ 0.17
SF3B2-212ENST00000531589 GNRH1P01148 92 aa16.1■□□□□ 0.17
SF3B2-212ENST00000531589 RHBDL3P58872 404 aa16.1■□□□□ 0.17
SF3B2-212ENST00000531589 ERC1Q8IUD2 1116 aa16.1■□□□□ 0.17
SF3B2-212ENST00000531589 DBNDD2Q9BQY9 259 aa16.1■□□□□ 0.17
SF3B2-212ENST00000531589 AK9Q5TCS8 1911 aa16.09■□□□□ 0.17
SF3B2-212ENST00000531589 DDTLA6NHG4 134 aaPredicted RBP16.09■□□□□ 0.17
SF3B2-212ENST00000531589 PHF20L1A8MW92 1017 aa16.09■□□□□ 0.17
SF3B2-212ENST00000531589 PDHXO00330 501 aa16.09■□□□□ 0.17
SF3B2-212ENST00000531589 TBC1D12O60347 775 aa16.09■□□□□ 0.17
SF3B2-212ENST00000531589 PLCG2P16885 1265 aa16.09■□□□□ 0.17
SF3B2-212ENST00000531589 HSP90AB4PQ58FF6 505 aa16.09■□□□□ 0.17
SF3B2-212ENST00000531589 NAA16Q6N069 864 aaPredicted RBP16.09■□□□□ 0.17
SF3B2-212ENST00000531589 CEP85Q6P2H3 762 aa16.09■□□□□ 0.17
SF3B2-212ENST00000531589 SH3BP5LQ7L8J4 393 aa16.09■□□□□ 0.17
SF3B2-212ENST00000531589 FASTKD5Q7L8L6 764 aaKnown RBP16.09■□□□□ 0.17
SF3B2-212ENST00000531589 ZNF384Q8TF68 577 aa16.09■□□□□ 0.17
SF3B2-212ENST00000531589 CHMP4BQ9H444 224 aaKnown RBP16.09■□□□□ 0.17
SF3B2-212ENST00000531589 DDX4Q9NQI0 724 aaKnown RBP16.09■□□□□ 0.17
SF3B2-212ENST00000531589 SNRKQ9NRH2 765 aa16.09■□□□□ 0.17
SF3B2-212ENST00000531589 ZHX2Q9Y6X8 837 aa16.09■□□□□ 0.17
SF3B2-212ENST00000531589 ATRNL1Q5VV63 1379 aa16.09■□□□□ 0.17
SF3B2-212ENST00000531589 PTPRAP18433 802 aa16.08■□□□□ 0.16
SF3B2-212ENST00000531589 NBPF11Q86T75 865 aa16.08■□□□□ 0.16
SF3B2-212ENST00000531589 PANK1Q8TE04 598 aa16.08■□□□□ 0.16
SF3B2-212ENST00000531589 LACTBP83111 547 aaPredicted RBP16.07■□□□□ 0.16
SF3B2-212ENST00000531589 TEX11Q8IYF3 940 aa16.07■□□□□ 0.16
SF3B2-212ENST00000531589 PARK7Q99497 189 aaKnown RBP16.07■□□□□ 0.16
SF3B2-212ENST00000531589 OSBPL5Q9H0X9 879 aaPredicted RBP16.07■□□□□ 0.16
SF3B2-212ENST00000531589 DHX36Q9H2U1 1008 aaKnown RBP16.07■□□□□ 0.16
SF3B2-212ENST00000531589 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.07■□□□□ 0.16
SF3B2-212ENST00000531589 COL2A1P02458 1487 aaPredicted RBP16.06■□□□□ 0.16
SF3B2-212ENST00000531589 CYP2E1P05181 493 aaPredicted RBP16.06■□□□□ 0.16
SF3B2-212ENST00000531589 PRMT2P55345 433 aa16.06■□□□□ 0.16
SF3B2-212ENST00000531589 PPP4CP60510 307 aa16.06■□□□□ 0.16
SF3B2-212ENST00000531589 C17orf99Q6UX52 265 aa16.06■□□□□ 0.16
SF3B2-212ENST00000531589 CERS3Q8IU89 383 aa16.06■□□□□ 0.16
SF3B2-212ENST00000531589 ARMC5Q96C12 935 aa16.06■□□□□ 0.16
SF3B2-212ENST00000531589 EAF2Q96CJ1 260 aaPredicted RBP16.06■□□□□ 0.16
SF3B2-212ENST00000531589 CCDC8Q9H0W5 538 aaPredicted RBP16.06■□□□□ 0.16
SF3B2-212ENST00000531589 HERC5Q9UII4 1024 aaKnown RBP16.06■□□□□ 0.16
SF3B2-212ENST00000531589 DBNLQ9UJU6 430 aaKnown RBP16.06■□□□□ 0.16
SF3B2-212ENST00000531589 DDX19BQ9UMR2 479 aa16.06■□□□□ 0.16
SF3B2-212ENST00000531589 AFG3L2Q9Y4W6 797 aa16.06■□□□□ 0.16
SF3B2-212ENST00000531589 DOCK2Q92608 1830 aa16.05■□□□□ 0.16
SF3B2-212ENST00000531589 A0A0G2JLL6 359 aaPredicted RBP16.05■□□□□ 0.16
SF3B2-212ENST00000531589 HMMRO75330 724 aa16.05■□□□□ 0.16
SF3B2-212ENST00000531589 HOXD10P28358 340 aa16.05■□□□□ 0.16
SF3B2-212ENST00000531589 SLC9C1Q4G0N8 1177 aa16.05■□□□□ 0.16
SF3B2-212ENST00000531589 TMED8Q6PL24 325 aaPredicted RBP16.05■□□□□ 0.16
SF3B2-212ENST00000531589 PRRT2Q7Z6L0 340 aaPredicted RBP16.05■□□□□ 0.16
SF3B2-212ENST00000531589 RPAP2Q8IXW5 612 aaPredicted RBP16.05■□□□□ 0.16
SF3B2-212ENST00000531589 TMEM106CQ9BVX2 250 aa16.05■□□□□ 0.16
SF3B2-212ENST00000531589 TBC1D2Q9BYX2 928 aa16.05■□□□□ 0.16
SF3B2-212ENST00000531589 AATFQ9NY61 560 aaKnown RBP eCLIP16.05■□□□□ 0.16
SF3B2-212ENST00000531589 PI4KBQ9UBF8 816 aa16.05■□□□□ 0.16
SF3B2-212ENST00000531589 ZAP70P43403 619 aa16.04■□□□□ 0.16
SF3B2-212ENST00000531589 MOGSQ13724 837 aa16.04■□□□□ 0.16
SF3B2-212ENST00000531589 SH3RF3Q8TEJ3 882 aaPredicted RBP16.04■□□□□ 0.16
SF3B2-212ENST00000531589 CPA4Q9UI42 421 aa16.04■□□□□ 0.16
SF3B2-212ENST00000531589 EXOC6BQ9Y2D4 811 aa16.04■□□□□ 0.16
SF3B2-212ENST00000531589 SLC45A1Q9Y2W3 748 aa16.04■□□□□ 0.16
SF3B2-212ENST00000531589 TRIM75PA6NK02 468 aa16.03■□□□□ 0.16
SF3B2-212ENST00000531589 GPAT2Q6NUI2 795 aa16.03■□□□□ 0.16
SF3B2-212ENST00000531589 GADL1Q6ZQY3 521 aa16.03■□□□□ 0.16
SF3B2-212ENST00000531589 AACSQ86V21 672 aa16.03■□□□□ 0.16
SF3B2-212ENST00000531589 TRIM34Q9BYJ4 488 aa16.03■□□□□ 0.16
SF3B2-212ENST00000531589 PTCH2Q9Y6C5 1203 aa16.03■□□□□ 0.16
SF3B2-212ENST00000531589 IDH1O75874 414 aaKnown RBP16.02■□□□□ 0.16
SF3B2-212ENST00000531589 FMNL1O95466 1100 aaPredicted RBP16.02■□□□□ 0.16
SF3B2-212ENST00000531589 PSMC4P43686 418 aa16.02■□□□□ 0.16
SF3B2-212ENST00000531589 CAP1Q01518 475 aa16.02■□□□□ 0.16
SF3B2-212ENST00000531589 MAP3K12Q12852 859 aa16.02■□□□□ 0.16
SF3B2-212ENST00000531589 FOXP4Q8IVH2 680 aaPredicted RBP16.02■□□□□ 0.16
SF3B2-212ENST00000531589 CLASRPQ8N2M8 674 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms