RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 SCYL3Q8IZE3 742 aa16.44■□□□□ 0.22
AMBRA1-210ENST00000531542 SSH3Q8TE77 659 aa16.44■□□□□ 0.22
AMBRA1-210ENST00000531542 NEUROD6Q96NK8 337 aa16.44■□□□□ 0.22
AMBRA1-210ENST00000531542 TNNQ9UQP3 1299 aa16.44■□□□□ 0.22
AMBRA1-210ENST00000531542 LDHCP07864 332 aa16.43■□□□□ 0.22
AMBRA1-210ENST00000531542 UQCRFS1P1P0C7P4 283 aa16.43■□□□□ 0.22
AMBRA1-210ENST00000531542 BTDP43251 543 aa16.43■□□□□ 0.22
AMBRA1-210ENST00000531542 RHBDL3P58872 404 aa16.43■□□□□ 0.22
AMBRA1-210ENST00000531542 ATP8B2P98198 1209 aa16.43■□□□□ 0.22
AMBRA1-210ENST00000531542 NBPF11Q86T75 865 aa16.43■□□□□ 0.22
AMBRA1-210ENST00000531542 TMEM57Q8N5G2 664 aa16.43■□□□□ 0.22
AMBRA1-210ENST00000531542 ZNF384Q8TF68 577 aa16.43■□□□□ 0.22
AMBRA1-210ENST00000531542 CLUAP1Q96AJ1 413 aa16.43■□□□□ 0.22
AMBRA1-210ENST00000531542 NSUN4Q96CB9 384 aaKnown RBP16.43■□□□□ 0.22
AMBRA1-210ENST00000531542 ZNF333Q96JL9 665 aa16.43■□□□□ 0.22
AMBRA1-210ENST00000531542 PDHXO00330 501 aa16.42■□□□□ 0.22
AMBRA1-210ENST00000531542 CTNND1O60716 968 aaKnown RBP16.42■□□□□ 0.22
AMBRA1-210ENST00000531542 PTPRAP18433 802 aa16.42■□□□□ 0.22
AMBRA1-210ENST00000531542 GORABQ5T7V8 394 aa16.42■□□□□ 0.22
AMBRA1-210ENST00000531542 ZNF512BQ96KM6 892 aaPredicted RBP16.42■□□□□ 0.22
AMBRA1-210ENST00000531542 DDX4Q9NQI0 724 aaKnown RBP16.42■□□□□ 0.22
AMBRA1-210ENST00000531542 ADGRA2Q96PE1 1338 aa16.42■□□□□ 0.22
AMBRA1-210ENST00000531542 DDTLA6NHG4 134 aaPredicted RBP16.41■□□□□ 0.22
AMBRA1-210ENST00000531542 FASTKD5Q7L8L6 764 aaKnown RBP16.41■□□□□ 0.22
AMBRA1-210ENST00000531542 PICK1Q9NRD5 415 aa16.41■□□□□ 0.22
AMBRA1-210ENST00000531542 SLC45A1Q9Y2W3 748 aa16.41■□□□□ 0.22
AMBRA1-210ENST00000531542 NOP58Q9Y2X3 529 aaKnown RBP16.41■□□□□ 0.22
AMBRA1-210ENST00000531542 AFG3L2Q9Y4W6 797 aa16.41■□□□□ 0.22
AMBRA1-210ENST00000531542 COL2A1P02458 1487 aaPredicted RBP16.41■□□□□ 0.22
AMBRA1-210ENST00000531542 A0A0G2JLL6 359 aaPredicted RBP16.4■□□□□ 0.22
AMBRA1-210ENST00000531542 POTEFA5A3E0 1075 aa16.4■□□□□ 0.22
AMBRA1-210ENST00000531542 ZBTB7BO15156 539 aaPredicted RBP16.4■□□□□ 0.22
AMBRA1-210ENST00000531542 MCAMP43121 646 aa16.4■□□□□ 0.22
AMBRA1-210ENST00000531542 SLC9C1Q4G0N8 1177 aa16.4■□□□□ 0.22
AMBRA1-210ENST00000531542 GPAT2Q6NUI2 795 aa16.4■□□□□ 0.22
AMBRA1-210ENST00000531542 PRRT2Q7Z6L0 340 aaPredicted RBP16.4■□□□□ 0.22
AMBRA1-210ENST00000531542 ZSCAN29Q8IWY8 852 aaPredicted RBP16.4■□□□□ 0.22
AMBRA1-210ENST00000531542 PTCH2Q9Y6C5 1203 aa16.4■□□□□ 0.22
AMBRA1-210ENST00000531542 ZHX2Q9Y6X8 837 aa16.4■□□□□ 0.22
AMBRA1-210ENST00000531542 HNRNPUQ00839 825 aaKnown RBP eCLIP16.39■□□□□ 0.21
AMBRA1-210ENST00000531542 TNNI3KQ59H18 835 aa16.39■□□□□ 0.21
AMBRA1-210ENST00000531542 PI16Q6UXB8 463 aa16.39■□□□□ 0.21
AMBRA1-210ENST00000531542 MIER1Q8N108 512 aa16.39■□□□□ 0.21
AMBRA1-210ENST00000531542 PARK7Q99497 189 aaKnown RBP16.39■□□□□ 0.21
AMBRA1-210ENST00000531542 TMEM106CQ9BVX2 250 aa16.39■□□□□ 0.21
AMBRA1-210ENST00000531542 FPGT-TNNI3KV9GXZ4 949 aa16.39■□□□□ 0.21
AMBRA1-210ENST00000531542 MYH2Q9UKX2 1941 aa16.39■□□□□ 0.21
AMBRA1-210ENST00000531542 BCRP11274 1271 aa16.38■□□□□ 0.21
AMBRA1-210ENST00000531542 HOXD10P28358 340 aa16.38■□□□□ 0.21
AMBRA1-210ENST00000531542 CCDC158Q5M9N0 1113 aa16.38■□□□□ 0.21
AMBRA1-210ENST00000531542 TBC1D9Q6ZT07 1266 aa16.38■□□□□ 0.21
AMBRA1-210ENST00000531542 FTSJ3Q8IY81 847 aaKnown RBP16.38■□□□□ 0.21
AMBRA1-210ENST00000531542 TBC1D2Q9BYX2 928 aa16.38■□□□□ 0.21
AMBRA1-210ENST00000531542 ARHGAP39Q9C0H5 1083 aa16.38■□□□□ 0.21
AMBRA1-210ENST00000531542 OSBPL5Q9H0X9 879 aaPredicted RBP16.38■□□□□ 0.21
AMBRA1-210ENST00000531542 RAI14Q9P0K7 980 aa16.38■□□□□ 0.21
AMBRA1-210ENST00000531542 KIAA0100Q14667 2235 aaKnown RBP16.37■□□□□ 0.21
AMBRA1-210ENST00000531542 CENPFP49454 3210 aa16.37■□□□□ 0.21
AMBRA1-210ENST00000531542 RBBP6Q7Z6E9 1792 aaKnown RBP16.37■□□□□ 0.21
AMBRA1-210ENST00000531542 PPP4CP60510 307 aa16.37■□□□□ 0.21
AMBRA1-210ENST00000531542 PICALMQ13492 652 aa16.37■□□□□ 0.21
AMBRA1-210ENST00000531542 TRIM47Q96LD4 638 aa16.37■□□□□ 0.21
AMBRA1-210ENST00000531542 LRP2BPQ9P2M1 347 aa16.37■□□□□ 0.21
AMBRA1-210ENST00000531542 SRRDQ9UH36 339 aa16.37■□□□□ 0.21
AMBRA1-210ENST00000531542 CPA4Q9UI42 421 aa16.37■□□□□ 0.21
AMBRA1-210ENST00000531542 SURF6O75683 361 aaKnown RBP16.36■□□□□ 0.21
AMBRA1-210ENST00000531542 BAG3O95817 575 aa16.36■□□□□ 0.21
AMBRA1-210ENST00000531542 PLCG2P16885 1265 aa16.36■□□□□ 0.21
AMBRA1-210ENST00000531542 PSMC4P43686 418 aa16.36■□□□□ 0.21
AMBRA1-210ENST00000531542 TMED8Q6PL24 325 aaPredicted RBP16.36■□□□□ 0.21
AMBRA1-210ENST00000531542 DHX36Q9H2U1 1008 aaKnown RBP16.36■□□□□ 0.21
AMBRA1-210ENST00000531542 HERC5Q9UII4 1024 aaKnown RBP16.36■□□□□ 0.21
AMBRA1-210ENST00000531542 ZBED9Q6R2W3 1325 aa16.36■□□□□ 0.21
AMBRA1-210ENST00000531542 RLBP1P12271 317 aa16.35■□□□□ 0.21
AMBRA1-210ENST00000531542 EN2P19622 333 aaPredicted RBP16.35■□□□□ 0.21
AMBRA1-210ENST00000531542 CTGFP29279 349 aa16.35■□□□□ 0.21
AMBRA1-210ENST00000531542 TTC39AQ5SRH9 613 aa16.35■□□□□ 0.21
AMBRA1-210ENST00000531542 DIEXFQ68CQ4 756 aaKnown RBP16.35■□□□□ 0.21
AMBRA1-210ENST00000531542 METTL16Q86W50 562 aaKnown RBP16.35■□□□□ 0.21
AMBRA1-210ENST00000531542 DBNDD2Q9BQY9 259 aa16.35■□□□□ 0.21
AMBRA1-210ENST00000531542 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.35■□□□□ 0.21
AMBRA1-210ENST00000531542 DOCK2Q92608 1830 aa16.34■□□□□ 0.21
AMBRA1-210ENST00000531542 CYP2E1P05181 493 aaPredicted RBP16.34■□□□□ 0.21
AMBRA1-210ENST00000531542 CYP2C8P10632 490 aa16.34■□□□□ 0.21
AMBRA1-210ENST00000531542 OSBPP22059 807 aa16.34■□□□□ 0.21
AMBRA1-210ENST00000531542 OS9Q13438 667 aaPredicted RBP16.34■□□□□ 0.21
AMBRA1-210ENST00000531542 NAA16Q6N069 864 aaPredicted RBP16.34■□□□□ 0.21
AMBRA1-210ENST00000531542 ITPRIPQ8IWB1 547 aa16.34■□□□□ 0.21
AMBRA1-210ENST00000531542 PROCA1Q8NCQ7 364 aaPredicted RBP16.34■□□□□ 0.21
AMBRA1-210ENST00000531542 NOL10Q9BSC4 688 aaKnown RBP16.34■□□□□ 0.21
AMBRA1-210ENST00000531542 PI4KBQ9UBF8 816 aa16.34■□□□□ 0.21
AMBRA1-210ENST00000531542 AGTPBP1Q9UPW5 1226 aa16.34■□□□□ 0.21
AMBRA1-210ENST00000531542 FMNL1O95466 1100 aaPredicted RBP16.33■□□□□ 0.2
AMBRA1-210ENST00000531542 CAP2P40123 477 aa16.33■□□□□ 0.2
AMBRA1-210ENST00000531542 FCGRTP55899 365 aa16.33■□□□□ 0.2
AMBRA1-210ENST00000531542 CERS3Q8IU89 383 aa16.33■□□□□ 0.2
AMBRA1-210ENST00000531542 TEX11Q8IYF3 940 aa16.33■□□□□ 0.2
AMBRA1-210ENST00000531542 GCC1Q96CN9 775 aa16.33■□□□□ 0.2
AMBRA1-210ENST00000531542 DBNLQ9UJU6 430 aaKnown RBP16.33■□□□□ 0.2
AMBRA1-210ENST00000531542 MKI67P46013 3256 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms