RNA–Protein interactions for RNA: ENST00000531539.5

FOXR1-202, Transcript of forkhead box R1, humanhuman

TSL 1 (best)

Gene FOXR1, Length 1,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-202ENST00000531539 IRX6P78412 446 aaPredicted RBP17.58■□□□□ 0.4
FOXR1-202ENST00000531539 SLC9C2Q5TAH2 1124 aa17.58■□□□□ 0.4
FOXR1-202ENST00000531539 ANKRD45Q5TZF3 282 aa17.58■□□□□ 0.4
FOXR1-202ENST00000531539 SH3BP5LQ7L8J4 393 aa17.58■□□□□ 0.4
FOXR1-202ENST00000531539 MIGA1Q8NAN2 632 aa17.58■□□□□ 0.4
FOXR1-202ENST00000531539 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.58■□□□□ 0.4
FOXR1-202ENST00000531539 ZKSCAN4Q969J2 545 aaPredicted RBP17.58■□□□□ 0.4
FOXR1-202ENST00000531539 WNK4Q96J92 1243 aa17.58■□□□□ 0.4
FOXR1-202ENST00000531539 WRNIP1Q96S55 665 aa17.58■□□□□ 0.4
FOXR1-202ENST00000531539 RWDD1Q9H446 243 aaPredicted RBP17.58■□□□□ 0.4
FOXR1-202ENST00000531539 ECHDC1Q9NTX5 307 aa17.58■□□□□ 0.4
FOXR1-202ENST00000531539 PAG1Q9NWQ8 432 aa17.58■□□□□ 0.4
FOXR1-202ENST00000531539 CSADQ9Y600 493 aa17.58■□□□□ 0.4
FOXR1-202ENST00000531539 HSPA8P11142 646 aaKnown RBP17.57■□□□□ 0.4
FOXR1-202ENST00000531539 HDAC1Q13547 482 aaPredicted RBP17.57■□□□□ 0.4
FOXR1-202ENST00000531539 COL13A1Q5TAT6 717 aaPredicted RBP17.57■□□□□ 0.4
FOXR1-202ENST00000531539 TGFBRAP1Q8WUH2 860 aa17.57■□□□□ 0.4
FOXR1-202ENST00000531539 HAUS7Q99871 368 aa17.57■□□□□ 0.4
FOXR1-202ENST00000531539 RNF186Q9NXI6 227 aa17.57■□□□□ 0.4
FOXR1-202ENST00000531539 CA12O43570 354 aa17.56■□□□□ 0.4
FOXR1-202ENST00000531539 NPM3O75607 178 aaKnown RBP17.56■□□□□ 0.4
FOXR1-202ENST00000531539 TM4SF4P48230 202 aa17.56■□□□□ 0.4
FOXR1-202ENST00000531539 VGLL4Q14135 290 aa17.56■□□□□ 0.4
FOXR1-202ENST00000531539 MAPKAPK5Q8IW41 473 aa17.56■□□□□ 0.4
FOXR1-202ENST00000531539 OPTNQ96CV9 577 aa17.56■□□□□ 0.4
FOXR1-202ENST00000531539 GPATCH3Q96I76 525 aa17.56■□□□□ 0.4
FOXR1-202ENST00000531539 AK9Q5TCS8 1911 aa17.56■□□□□ 0.4
FOXR1-202ENST00000531539 RPAP1Q9BWH6 1393 aaPredicted RBP17.55■□□□□ 0.4
FOXR1-202ENST00000531539 SLURP2P0DP57 97 aa17.55■□□□□ 0.4
FOXR1-202ENST00000531539 PDE6AP16499 860 aa17.55■□□□□ 0.4
FOXR1-202ENST00000531539 INPP5BP32019 993 aa17.55■□□□□ 0.4
FOXR1-202ENST00000531539 GJA5P36382 358 aa17.55■□□□□ 0.4
FOXR1-202ENST00000531539 TSHZ3Q63HK5 1081 aa17.55■□□□□ 0.4
FOXR1-202ENST00000531539 CNKSR2Q8WXI2 1034 aa17.55■□□□□ 0.4
FOXR1-202ENST00000531539 GCC1Q96CN9 775 aa17.55■□□□□ 0.4
FOXR1-202ENST00000531539 OSBPL5Q9H0X9 879 aaPredicted RBP17.55■□□□□ 0.4
FOXR1-202ENST00000531539 ZNF112Q9UJU3 913 aa17.55■□□□□ 0.4
FOXR1-202ENST00000531539 MANSC4A6NHS7 340 aaPredicted RBP17.54■□□□□ 0.4
FOXR1-202ENST00000531539 ZBTB48P10074 688 aaPredicted RBP17.54■□□□□ 0.4
FOXR1-202ENST00000531539 SREBF2Q12772 1141 aa17.54■□□□□ 0.4
FOXR1-202ENST00000531539 PCNTO95613 3336 aa17.54■□□□□ 0.4
FOXR1-202ENST00000531539 ZNF532Q9HCE3 1301 aa17.53■□□□□ 0.4
FOXR1-202ENST00000531539 MAGEB6P1A0A0J9YX57 407 aa17.53■□□□□ 0.4
FOXR1-202ENST00000531539 IGHDP01880 384 aa17.53■□□□□ 0.4
FOXR1-202ENST00000531539 USP5P45974 858 aa17.53■□□□□ 0.4
FOXR1-202ENST00000531539 INHBEP58166 350 aa17.53■□□□□ 0.4
FOXR1-202ENST00000531539 TMED8Q6PL24 325 aaPredicted RBP17.53■□□□□ 0.4
FOXR1-202ENST00000531539 OTUD7AQ8TE49 926 aaPredicted RBP17.53■□□□□ 0.4
FOXR1-202ENST00000531539 OTUD5Q96G74 571 aa17.53■□□□□ 0.4
FOXR1-202ENST00000531539 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.53■□□□□ 0.4
FOXR1-202ENST00000531539 PRDM10Q9NQV6 1147 aa17.53■□□□□ 0.4
FOXR1-202ENST00000531539 SNCAIPQ9Y6H5 919 aa17.53■□□□□ 0.4
FOXR1-202ENST00000531539 RFX7Q2KHR2 1363 aa17.53■□□□□ 0.4
FOXR1-202ENST00000531539 MYO5AQ9Y4I1 1855 aaKnown RBP17.52■□□□□ 0.4
FOXR1-202ENST00000531539 SLFNL1Q499Z3 407 aa17.52■□□□□ 0.4
FOXR1-202ENST00000531539 B4GALNT3Q6L9W6 998 aa17.52■□□□□ 0.4
FOXR1-202ENST00000531539 ERO1BQ86YB8 467 aa17.52■□□□□ 0.4
FOXR1-202ENST00000531539 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.52■□□□□ 0.4
FOXR1-202ENST00000531539 SAP30BPQ9UHR5 308 aaKnown RBP17.52■□□□□ 0.4
FOXR1-202ENST00000531539 FAM196BA6NMK8 535 aa17.51■□□□□ 0.39
FOXR1-202ENST00000531539 PHF20L1A8MW92 1017 aa17.51■□□□□ 0.39
FOXR1-202ENST00000531539 TBC1D8O95759 1140 aa17.51■□□□□ 0.39
FOXR1-202ENST00000531539 MAP3K10Q02779 954 aa17.51■□□□□ 0.39
FOXR1-202ENST00000531539 CERS3Q8IU89 383 aa17.51■□□□□ 0.39
FOXR1-202ENST00000531539 DHX36Q9H2U1 1008 aaKnown RBP17.51■□□□□ 0.39
FOXR1-202ENST00000531539 SAGE1Q9NXZ1 904 aa17.51■□□□□ 0.39
FOXR1-202ENST00000531539 PALD1Q9ULE6 856 aa17.51■□□□□ 0.39
FOXR1-202ENST00000531539 THSD7BQ9C0I4 1608 aa17.5■□□□□ 0.39
FOXR1-202ENST00000531539 TCRBV5S4A2TA0A5A2 114 aa17.5■□□□□ 0.39
FOXR1-202ENST00000531539 SPDYE5A6NIY4 337 aa17.5■□□□□ 0.39
FOXR1-202ENST00000531539 ERC2O15083 957 aa17.5■□□□□ 0.39
FOXR1-202ENST00000531539 TBC1D12O60347 775 aa17.5■□□□□ 0.39
FOXR1-202ENST00000531539 ADD2P35612 726 aa17.5■□□□□ 0.39
FOXR1-202ENST00000531539 GTF2A2P52657 109 aa17.5■□□□□ 0.39
FOXR1-202ENST00000531539 SLC4A8Q2Y0W8 1093 aa17.5■□□□□ 0.39
FOXR1-202ENST00000531539 ZSCAN25Q6NSZ9 544 aa17.5■□□□□ 0.39
FOXR1-202ENST00000531539 IFNL1Q8IU54 200 aa17.5■□□□□ 0.39
FOXR1-202ENST00000531539 RIOK1Q9BRS2 568 aaKnown RBP17.5■□□□□ 0.39
FOXR1-202ENST00000531539 PI4KBQ9UBF8 816 aa17.5■□□□□ 0.39
FOXR1-202ENST00000531539 FLT1P17948 1338 aa17.49■□□□□ 0.39
FOXR1-202ENST00000531539 TTC41PQ6P2S7 1318 aa17.49■□□□□ 0.39
FOXR1-202ENST00000531539 CHGBP05060 677 aa17.49■□□□□ 0.39
FOXR1-202ENST00000531539 MX1P20591 662 aa17.49■□□□□ 0.39
FOXR1-202ENST00000531539 PPATQ06203 517 aa17.49■□□□□ 0.39
FOXR1-202ENST00000531539 OTUD7BQ6GQQ9 843 aa17.49■□□□□ 0.39
FOXR1-202ENST00000531539 FOXP4Q8IVH2 680 aaPredicted RBP17.49■□□□□ 0.39
FOXR1-202ENST00000531539 MS4A4AQ96JQ5 239 aa17.49■□□□□ 0.39
FOXR1-202ENST00000531539 CCL15-CCL14A0A0B4J2E2 113 aa17.48■□□□□ 0.39
FOXR1-202ENST00000531539 IRF6O14896 467 aa17.48■□□□□ 0.39
FOXR1-202ENST00000531539 CTNND1O60716 968 aaKnown RBP17.48■□□□□ 0.39
FOXR1-202ENST00000531539 PPIL2Q13356 520 aa17.48■□□□□ 0.39
FOXR1-202ENST00000531539 CCL15Q16663 113 aa17.48■□□□□ 0.39
FOXR1-202ENST00000531539 NOL9Q5SY16 702 aaKnown RBP17.48■□□□□ 0.39
FOXR1-202ENST00000531539 SCYL3Q8IZE3 742 aa17.48■□□□□ 0.39
FOXR1-202ENST00000531539 CRACR2BQ8N4Y2 399 aaPredicted RBP17.48■□□□□ 0.39
FOXR1-202ENST00000531539 PTPN18Q99952 460 aa17.48■□□□□ 0.39
FOXR1-202ENST00000531539 TRIM34Q9BYJ4 488 aa17.48■□□□□ 0.39
FOXR1-202ENST00000531539 CRNKL1Q9BZJ0 848 aaKnown RBP17.48■□□□□ 0.39
FOXR1-202ENST00000531539 ARMT1Q9H993 441 aa17.48■□□□□ 0.39
FOXR1-202ENST00000531539 PICK1Q9NRD5 415 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms