RNA–Protein interactions for RNA: ENST00000531131.1

NXF1-208, Transcript of nuclear RNA export factor 1, human

TSL 2 BASIC

Gene NXF1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXF1-208	ENST00000531131	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.81	□□□□□ -0.2
NXF1-208	ENST00000531131	EDC3	Q96F86	508 aa	Known RBP	13.81	□□□□□ -0.2
NXF1-208	ENST00000531131	MYH7	P12883	1935 aa		13.81	□□□□□ -0.2
NXF1-208	ENST00000531131	FAM155A	B1AL88	458 aa	Predicted RBP	13.8	□□□□□ -0.2
NXF1-208	ENST00000531131	ZFY	P08048	801 aa	Predicted RBP	13.8	□□□□□ -0.2
NXF1-208	ENST00000531131	SLC10A3	P09131	477 aa		13.8	□□□□□ -0.2
NXF1-208	ENST00000531131	ADD2	P35612	726 aa		13.8	□□□□□ -0.2
NXF1-208	ENST00000531131	PDE1A	P54750	535 aa		13.8	□□□□□ -0.2
NXF1-208	ENST00000531131	MAP2K1	Q02750	393 aa	Predicted RBP	13.8	□□□□□ -0.2
NXF1-208	ENST00000531131	PICALM	Q13492	652 aa		13.8	□□□□□ -0.2
NXF1-208	ENST00000531131	PRKG1	Q13976	671 aa		13.8	□□□□□ -0.2
NXF1-208	ENST00000531131	B4GALNT3	Q6L9W6	998 aa		13.8	□□□□□ -0.2
NXF1-208	ENST00000531131	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.8	□□□□□ -0.2
NXF1-208	ENST00000531131	KBTBD3	Q8NAB2	608 aa		13.8	□□□□□ -0.2
NXF1-208	ENST00000531131	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.8	□□□□□ -0.2
NXF1-208	ENST00000531131	LNPK	Q9C0E8	428 aa		13.8	□□□□□ -0.2
NXF1-208	ENST00000531131	DHX36	Q9H2U1	1008 aa	Known RBP	13.8	□□□□□ -0.2
NXF1-208	ENST00000531131	DDX4	Q9NQI0	724 aa	Known RBP	13.8	□□□□□ -0.2
NXF1-208	ENST00000531131	ZNF532	Q9HCE3	1301 aa		13.8	□□□□□ -0.2
NXF1-208	ENST00000531131	FOCAD	Q5VW36	1801 aa		13.8	□□□□□ -0.2
NXF1-208	ENST00000531131	ATRNL1	Q5VV63	1379 aa		13.8	□□□□□ -0.2
NXF1-208	ENST00000531131	CDK5RAP2	Q96SN8	1893 aa		13.79	□□□□□ -0.2
NXF1-208	ENST00000531131	MAGEB6P1	A0A0J9YX57	407 aa		13.79	□□□□□ -0.2
NXF1-208	ENST00000531131	TCRBV5S4A2T	A0A5A2	114 aa		13.79	□□□□□ -0.2
NXF1-208	ENST00000531131	MAP3K9	P80192	1104 aa		13.79	□□□□□ -0.2
NXF1-208	ENST00000531131	MAP3K10	Q02779	954 aa		13.79	□□□□□ -0.2
NXF1-208	ENST00000531131	TICAM2	Q86XR7	235 aa		13.79	□□□□□ -0.2
NXF1-208	ENST00000531131	CDAN1	Q8IWY9	1227 aa		13.79	□□□□□ -0.2
NXF1-208	ENST00000531131	ZFPM1	Q8IX07	1006 aa		13.79	□□□□□ -0.2
NXF1-208	ENST00000531131	SLC10A4	Q96EP9	437 aa		13.79	□□□□□ -0.2
NXF1-208	ENST00000531131	CSRNP1	Q96S65	589 aa		13.79	□□□□□ -0.2
NXF1-208	ENST00000531131	ZNF341	Q9BYN7	854 aa		13.79	□□□□□ -0.2
NXF1-208	ENST00000531131	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.79	□□□□□ -0.2
NXF1-208	ENST00000531131	THSD7B	Q9C0I4	1608 aa		13.79	□□□□□ -0.2
NXF1-208	ENST00000531131	TBC1D12	O60347	775 aa		13.78	□□□□□ -0.2
NXF1-208	ENST00000531131	CAPN15	O75808	1086 aa		13.78	□□□□□ -0.2
NXF1-208	ENST00000531131	GRM1	Q13255	1194 aa		13.78	□□□□□ -0.2
NXF1-208	ENST00000531131	TSHZ3	Q63HK5	1081 aa		13.78	□□□□□ -0.2
NXF1-208	ENST00000531131	RASAL3	Q86YV0	1011 aa		13.78	□□□□□ -0.2
NXF1-208	ENST00000531131	MIGA1	Q8NAN2	632 aa		13.78	□□□□□ -0.2
NXF1-208	ENST00000531131	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
NXF1-208	ENST00000531131	TGFBRAP1	Q8WUH2	860 aa		13.78	□□□□□ -0.2
NXF1-208	ENST00000531131	RIOK1	Q9BRS2	568 aa	Known RBP	13.78	□□□□□ -0.2
NXF1-208	ENST00000531131	OSBPL3	Q9H4L5	887 aa		13.78	□□□□□ -0.2
NXF1-208	ENST00000531131	ZNF112	Q9UJU3	913 aa		13.78	□□□□□ -0.2
NXF1-208	ENST00000531131	CSAD	Q9Y600	493 aa		13.78	□□□□□ -0.2
NXF1-208	ENST00000531131	DDTL	A6NHG4	134 aa	Predicted RBP	13.77	□□□□□ -0.21
NXF1-208	ENST00000531131	ZBTB48	P10074	688 aa	Predicted RBP	13.77	□□□□□ -0.21
NXF1-208	ENST00000531131	FLT1	P17948	1338 aa		13.77	□□□□□ -0.21
NXF1-208	ENST00000531131	DYNLL1	P63167	89 aa	Known RBP	13.77	□□□□□ -0.21
NXF1-208	ENST00000531131	SH3BP5L	Q7L8J4	393 aa		13.77	□□□□□ -0.21
NXF1-208	ENST00000531131	TNS4	Q8IZW8	715 aa		13.77	□□□□□ -0.21
NXF1-208	ENST00000531131	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.77	□□□□□ -0.21
NXF1-208	ENST00000531131	PI4KB	Q9UBF8	816 aa		13.77	□□□□□ -0.21
NXF1-208	ENST00000531131	FZD1	Q9UP38	647 aa		13.77	□□□□□ -0.21
NXF1-208	ENST00000531131	RNF113A	O15541	343 aa	Known RBP	13.76	□□□□□ -0.21
NXF1-208	ENST00000531131	NEFL	P07196	543 aa		13.76	□□□□□ -0.21
NXF1-208	ENST00000531131	USP5	P45974	858 aa		13.76	□□□□□ -0.21
NXF1-208	ENST00000531131	SPRYD7	Q5W111	196 aa		13.76	□□□□□ -0.21
NXF1-208	ENST00000531131	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.76	□□□□□ -0.21
NXF1-208	ENST00000531131	MIGA2	Q7L4E1	593 aa		13.76	□□□□□ -0.21
NXF1-208	ENST00000531131	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.76	□□□□□ -0.21
NXF1-208	ENST00000531131	PLEKHM2	Q8IWE5	1019 aa		13.76	□□□□□ -0.21
NXF1-208	ENST00000531131	EVI5L	Q96CN4	794 aa		13.76	□□□□□ -0.21
NXF1-208	ENST00000531131	WRNIP1	Q96S55	665 aa		13.76	□□□□□ -0.21
NXF1-208	ENST00000531131	BEGAIN	Q9BUH8	593 aa		13.76	□□□□□ -0.21
NXF1-208	ENST00000531131	WBP1L	Q9NX94	342 aa		13.76	□□□□□ -0.21
NXF1-208	ENST00000531131	HERC5	Q9UII4	1024 aa	Known RBP	13.76	□□□□□ -0.21
NXF1-208	ENST00000531131	OTOF	Q9HC10	1997 aa		13.76	□□□□□ -0.21
NXF1-208	ENST00000531131	MYH1	P12882	1939 aa		13.75	□□□□□ -0.21
NXF1-208	ENST00000531131	CA12	O43570	354 aa		13.75	□□□□□ -0.21
NXF1-208	ENST00000531131	AOC2	O75106	756 aa		13.75	□□□□□ -0.21
NXF1-208	ENST00000531131	HLA-DOA	P06340	250 aa		13.75	□□□□□ -0.21
NXF1-208	ENST00000531131	INHBE	P58166	350 aa		13.75	□□□□□ -0.21
NXF1-208	ENST00000531131	KIF23	Q02241	960 aa	Predicted RBP	13.75	□□□□□ -0.21
NXF1-208	ENST00000531131	VGLL4	Q14135	290 aa		13.75	□□□□□ -0.21
NXF1-208	ENST00000531131	MAPKAPK5	Q8IW41	473 aa		13.75	□□□□□ -0.21
NXF1-208	ENST00000531131	APPBP2	Q92624	585 aa		13.75	□□□□□ -0.21
NXF1-208	ENST00000531131	AIDA	Q96BJ3	306 aa		13.75	□□□□□ -0.21
NXF1-208	ENST00000531131	CLMN	Q96JQ2	1002 aa		13.75	□□□□□ -0.21
NXF1-208	ENST00000531131	TAOK2	Q9UL54	1235 aa		13.75	□□□□□ -0.21
NXF1-208	ENST00000531131	CTNND1	O60716	968 aa	Known RBP	13.74	□□□□□ -0.21
NXF1-208	ENST00000531131	SREBF2	Q12772	1141 aa		13.74	□□□□□ -0.21
NXF1-208	ENST00000531131	NOL9	Q5SY16	702 aa	Known RBP	13.74	□□□□□ -0.21
NXF1-208	ENST00000531131	TTC6	Q86TZ1	520 aa		13.74	□□□□□ -0.21
NXF1-208	ENST00000531131	METTL16	Q86W50	562 aa	Known RBP	13.74	□□□□□ -0.21
NXF1-208	ENST00000531131	ERO1B	Q86YB8	467 aa		13.74	□□□□□ -0.21
NXF1-208	ENST00000531131	WNK4	Q96J92	1243 aa		13.74	□□□□□ -0.21
NXF1-208	ENST00000531131	FSD1	Q9BTV5	496 aa		13.74	□□□□□ -0.21
NXF1-208	ENST00000531131	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
NXF1-208	ENST00000531131	ATP8A2	Q9NTI2	1148 aa		13.74	□□□□□ -0.21
NXF1-208	ENST00000531131	LAMB1	P07942	1786 aa		13.73	□□□□□ -0.21
NXF1-208	ENST00000531131	MANSC4	A6NHS7	340 aa	Predicted RBP	13.73	□□□□□ -0.21
NXF1-208	ENST00000531131	SPDYE5	A6NIY4	337 aa		13.73	□□□□□ -0.21
NXF1-208	ENST00000531131	PHF20L1	A8MW92	1017 aa		13.73	□□□□□ -0.21
NXF1-208	ENST00000531131	MBD4	O95243	580 aa		13.73	□□□□□ -0.21
NXF1-208	ENST00000531131	TM4SF4	P48230	202 aa		13.73	□□□□□ -0.21
NXF1-208	ENST00000531131	LCORL	Q8N3X6	602 aa		13.73	□□□□□ -0.21
NXF1-208	ENST00000531131	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.73	□□□□□ -0.21
NXF1-208	ENST00000531131	DDRGK1	Q96HY6	314 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms