RNA–Protein interactions for RNA: ENST00000530724.1

TRIM3-210, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 651 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-210ENST00000530724 ATG9AQ7Z3C6 839 aa13.37□□□□□ -0.27
TRIM3-210ENST00000530724 RIC3Q7Z5B4 369 aa13.37□□□□□ -0.27
TRIM3-210ENST00000530724 SGMS1Q86VZ5 419 aa13.37□□□□□ -0.27
TRIM3-210ENST00000530724 VPS37DQ86XT2 251 aa13.37□□□□□ -0.27
TRIM3-210ENST00000530724 TMTC1Q8IUR5 882 aa13.37□□□□□ -0.27
TRIM3-210ENST00000530724 CNGA4Q8IV77 575 aa13.37□□□□□ -0.27
TRIM3-210ENST00000530724 ABTB2Q8N961 1025 aa13.37□□□□□ -0.27
TRIM3-210ENST00000530724 KRI1Q8N9T8 703 aaKnown RBP13.37□□□□□ -0.27
TRIM3-210ENST00000530724 NCOA7Q8NI08 942 aa13.37□□□□□ -0.27
TRIM3-210ENST00000530724 CEP89Q96ST8 783 aa13.37□□□□□ -0.27
TRIM3-210ENST00000530724 TACO1Q9BSH4 297 aaKnown RBP13.37□□□□□ -0.27
TRIM3-210ENST00000530724 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.37□□□□□ -0.27
TRIM3-210ENST00000530724 LRRC2Q9BYS8 371 aa13.37□□□□□ -0.27
TRIM3-210ENST00000530724 SIL1Q9H173 461 aa13.37□□□□□ -0.27
TRIM3-210ENST00000530724 PDE11AQ9HCR9 933 aa13.37□□□□□ -0.27
TRIM3-210ENST00000530724 MAN1B1Q9UKM7 699 aa13.37□□□□□ -0.27
TRIM3-210ENST00000530724 KCNH3Q9ULD8 1083 aa13.37□□□□□ -0.27
TRIM3-210ENST00000530724 COL22A1Q8NFW1 1626 aaPredicted RBP13.36□□□□□ -0.27
TRIM3-210ENST00000530724 A0A087WUV0 522 aaPredicted RBP13.36□□□□□ -0.27
TRIM3-210ENST00000530724 CTAGE9A4FU28 777 aa13.36□□□□□ -0.27
TRIM3-210ENST00000530724 EIF3CLB5ME19 914 aaKnown RBP13.36□□□□□ -0.27
TRIM3-210ENST00000530724 BIN1O00499 593 aa13.36□□□□□ -0.27
TRIM3-210ENST00000530724 SH2B2O14492 632 aaPredicted RBP13.36□□□□□ -0.27
TRIM3-210ENST00000530724 PRC1O43663 620 aa13.36□□□□□ -0.27
TRIM3-210ENST00000530724 PRPF6O94906 941 aaKnown RBP13.36□□□□□ -0.27
TRIM3-210ENST00000530724 CHRM1P11229 460 aaPredicted RBP13.36□□□□□ -0.27
TRIM3-210ENST00000530724 MMP14P50281 582 aa13.36□□□□□ -0.27
TRIM3-210ENST00000530724 ANTXR2P58335 489 aa13.36□□□□□ -0.27
TRIM3-210ENST00000530724 CASP8Q14790 479 aa13.36□□□□□ -0.27
TRIM3-210ENST00000530724 MAP9Q49MG5 647 aa13.36□□□□□ -0.27
TRIM3-210ENST00000530724 SPATA1Q5VX52 437 aa13.36□□□□□ -0.27
TRIM3-210ENST00000530724 UBE3BQ7Z3V4 1068 aa13.36□□□□□ -0.27
TRIM3-210ENST00000530724 CCDC12Q8WUD4 166 aaPredicted RBP13.36□□□□□ -0.27
TRIM3-210ENST00000530724 ZNF512BQ96KM6 892 aaPredicted RBP13.36□□□□□ -0.27
TRIM3-210ENST00000530724 EIF3CQ99613 913 aaKnown RBP13.36□□□□□ -0.27
TRIM3-210ENST00000530724 NCAPGQ9BPX3 1015 aa13.36□□□□□ -0.27
TRIM3-210ENST00000530724 MRPL44Q9H9J2 332 aaKnown RBP13.36□□□□□ -0.27
TRIM3-210ENST00000530724 KLF18A0A0U1RQI7 1052 aa13.35□□□□□ -0.27
TRIM3-210ENST00000530724 GOLGA8BA8MQT2 603 aa13.35□□□□□ -0.27
TRIM3-210ENST00000530724 SOX12O15370 315 aa13.35□□□□□ -0.27
TRIM3-210ENST00000530724 MFAP3LO75121 409 aa13.35□□□□□ -0.27
TRIM3-210ENST00000530724 ATP2B1P20020 1258 aa13.35□□□□□ -0.27
TRIM3-210ENST00000530724 FOXO4P98177 505 aa13.35□□□□□ -0.27
TRIM3-210ENST00000530724 ITIH3Q06033 890 aa13.35□□□□□ -0.27
TRIM3-210ENST00000530724 PDE4BQ07343 736 aa13.35□□□□□ -0.27
TRIM3-210ENST00000530724 POSTNQ15063 836 aa13.35□□□□□ -0.27
TRIM3-210ENST00000530724 ALX1Q15699 326 aa13.35□□□□□ -0.27
TRIM3-210ENST00000530724 HSP90B2PQ58FF3 399 aa13.35□□□□□ -0.27
TRIM3-210ENST00000530724 LRRC31Q6UY01 552 aa13.35□□□□□ -0.27
TRIM3-210ENST00000530724 ANKRD13DQ6ZTN6 518 aa13.35□□□□□ -0.27
TRIM3-210ENST00000530724 DDX46Q7L014 1031 aaKnown RBP13.35□□□□□ -0.27
TRIM3-210ENST00000530724 SH3RF1Q7Z6J0 888 aa13.35□□□□□ -0.27
TRIM3-210ENST00000530724 CNNM3Q8NE01 707 aa13.35□□□□□ -0.27
TRIM3-210ENST00000530724 WASF1Q92558 559 aa13.35□□□□□ -0.27
TRIM3-210ENST00000530724 CCDC34Q96HJ3 373 aa13.35□□□□□ -0.27
TRIM3-210ENST00000530724 TMEM87BQ96K49 555 aa13.35□□□□□ -0.27
TRIM3-210ENST00000530724 PNKPQ96T60 521 aa13.35□□□□□ -0.27
TRIM3-210ENST00000530724 NAPGQ99747 312 aaPredicted RBP13.35□□□□□ -0.27
TRIM3-210ENST00000530724 A1CFQ9NQ94 594 aaKnown RBP13.35□□□□□ -0.27
TRIM3-210ENST00000530724 ADD3Q9UEY8 706 aaKnown RBP13.35□□□□□ -0.27
TRIM3-210ENST00000530724 AKAP2Q9Y2D5 859 aa13.35□□□□□ -0.27
TRIM3-210ENST00000530724 JRKLQ9Y4A0 524 aa13.35□□□□□ -0.27
TRIM3-210ENST00000530724 NFE2L3Q9Y4A8 694 aa13.35□□□□□ -0.27
TRIM3-210ENST00000530724 ZC3H4Q9UPT8 1303 aaKnown RBP13.35□□□□□ -0.27
TRIM3-210ENST00000530724 NWD2Q9ULI1 1742 aa13.34□□□□□ -0.27
TRIM3-210ENST00000530724 CTAGE15A4D2H0 777 aa13.34□□□□□ -0.27
TRIM3-210ENST00000530724 PSMD14O00487 310 aa13.34□□□□□ -0.27
TRIM3-210ENST00000530724 CPLX1O14810 134 aa13.34□□□□□ -0.27
TRIM3-210ENST00000530724 TRIM66O15016 1216 aa13.34□□□□□ -0.27
TRIM3-210ENST00000530724 POLR3DP05423 398 aaPredicted RBP13.34□□□□□ -0.27
TRIM3-210ENST00000530724 CTAGE8P0CG41 777 aa13.34□□□□□ -0.27
TRIM3-210ENST00000530724 GUCY1B3Q02153 619 aa13.34□□□□□ -0.27
TRIM3-210ENST00000530724 PNOCQ13519 176 aa13.34□□□□□ -0.27
TRIM3-210ENST00000530724 GNL2Q13823 731 aaKnown RBP13.34□□□□□ -0.27
TRIM3-210ENST00000530724 NTRK3Q16288 839 aa13.34□□□□□ -0.27
TRIM3-210ENST00000530724 LONRF3Q496Y0 759 aa13.34□□□□□ -0.27
TRIM3-210ENST00000530724 KRT40Q6A162 431 aa13.34□□□□□ -0.27
TRIM3-210ENST00000530724 ZNF790Q6PG37 636 aa13.34□□□□□ -0.27
TRIM3-210ENST00000530724 GBP6Q6ZN66 633 aa13.34□□□□□ -0.27
TRIM3-210ENST00000530724 ZNF572Q7Z3I7 529 aaPredicted RBP13.34□□□□□ -0.27
TRIM3-210ENST00000530724 CTAGE6Q86UF2 777 aa13.34□□□□□ -0.27
TRIM3-210ENST00000530724 CTAGE4Q8IX94 777 aa13.34□□□□□ -0.27
TRIM3-210ENST00000530724 C10orf67Q8IYJ2 551 aa13.34□□□□□ -0.27
TRIM3-210ENST00000530724 PLBD2Q8NHP8 589 aa13.34□□□□□ -0.27
TRIM3-210ENST00000530724 XAGE3Q8WTP9 111 aa13.34□□□□□ -0.27
TRIM3-210ENST00000530724 APPBP2Q92624 585 aa13.34□□□□□ -0.27
TRIM3-210ENST00000530724 FOXP1Q9H334 677 aaPredicted RBP13.34□□□□□ -0.27
TRIM3-210ENST00000530724 ESF1Q9H501 851 aaKnown RBP13.34□□□□□ -0.27
TRIM3-210ENST00000530724 ABCB6Q9NP58 842 aa13.34□□□□□ -0.27
TRIM3-210ENST00000530724 VPS18Q9P253 973 aa13.34□□□□□ -0.27
TRIM3-210ENST00000530724 FBXO2Q9UK22 296 aaPredicted RBP13.34□□□□□ -0.27
TRIM3-210ENST00000530724 WWC3Q9ULE0 1092 aa13.34□□□□□ -0.27
TRIM3-210ENST00000530724 ANGEL1Q9UNK9 670 aaKnown RBP13.34□□□□□ -0.27
TRIM3-210ENST00000530724 LRP6O75581 1613 aa13.34□□□□□ -0.27
TRIM3-210ENST00000530724 PARP4Q9UKK3 1724 aaKnown RBP13.33□□□□□ -0.27
TRIM3-210ENST00000530724 GLI3P10071 1580 aa13.33□□□□□ -0.28
TRIM3-210ENST00000530724 RGPD8O14715 1765 aaPredicted RBP13.33□□□□□ -0.28
TRIM3-210ENST00000530724 SRRM3A6NNA2 597 aaPredicted RBP13.33□□□□□ -0.28
TRIM3-210ENST00000530724 LIFRP42702 1097 aa13.33□□□□□ -0.28
TRIM3-210ENST00000530724 GTF2A1P52655 376 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms