RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 COL2A1P02458 1487 aaPredicted RBP25.69■■□□□ 1.7
CAPN1-220ENST00000530567 A0A0D9SFI3 127 aa25.68■■□□□ 1.7
CAPN1-220ENST00000530567 BMP2KLQ5H9B9 411 aa25.68■■□□□ 1.7
CAPN1-220ENST00000530567 NBPF12Q5TAG4 269 aaPredicted RBP25.68■■□□□ 1.7
CAPN1-220ENST00000530567 CST9Q5W186 159 aa25.68■■□□□ 1.7
CAPN1-220ENST00000530567 AIDAQ96BJ3 306 aa25.68■■□□□ 1.7
CAPN1-220ENST00000530567 STRBPQ96SI9 672 aaKnown RBP25.68■■□□□ 1.7
CAPN1-220ENST00000530567 OSBPL5Q9H0X9 879 aaPredicted RBP25.68■■□□□ 1.7
CAPN1-220ENST00000530567 NMIQ13287 307 aaPredicted RBP25.67■■□□□ 1.7
CAPN1-220ENST00000530567 MAPKAPK5Q8IW41 473 aa25.67■■□□□ 1.7
CAPN1-220ENST00000530567 MKRN1Q9UHC7 482 aaKnown RBP25.67■■□□□ 1.7
CAPN1-220ENST00000530567 GTF3C3Q9Y5Q9 886 aa25.67■■□□□ 1.7
CAPN1-220ENST00000530567 ATRNL1Q5VV63 1379 aa25.67■■□□□ 1.7
CAPN1-220ENST00000530567 NAV1Q8NEY1 1877 aa25.66■■□□□ 1.7
CAPN1-220ENST00000530567 GPAA1O43292 621 aa25.66■■□□□ 1.7
CAPN1-220ENST00000530567 PRKAB2O43741 272 aa25.66■■□□□ 1.7
CAPN1-220ENST00000530567 CRNKL1Q9BZJ0 848 aaKnown RBP25.66■■□□□ 1.7
CAPN1-220ENST00000530567 CELF2O95319 508 aaKnown RBP25.65■■□□□ 1.7
CAPN1-220ENST00000530567 SDR42E1Q8WUS8 393 aa25.65■■□□□ 1.7
CAPN1-220ENST00000530567 ZNF408Q9H9D4 720 aa25.65■■□□□ 1.7
CAPN1-220ENST00000530567 HELLSQ9NRZ9 838 aa25.65■■□□□ 1.7
CAPN1-220ENST00000530567 DDTLA6NHG4 134 aaPredicted RBP25.64■■□□□ 1.7
CAPN1-220ENST00000530567 CCDC129Q6ZRS4 1044 aa25.64■■□□□ 1.7
CAPN1-220ENST00000530567 SIPA1L1O43166 1804 aa25.64■■□□□ 1.7
CAPN1-220ENST00000530567 USP5P45974 858 aa25.63■■□□□ 1.69
CAPN1-220ENST00000530567 PAPPA2Q9BXP8 1791 aa25.63■■□□□ 1.69
CAPN1-220ENST00000530567 MYH1P12882 1939 aa25.63■■□□□ 1.69
CAPN1-220ENST00000530567 HIP1O00291 1037 aa25.63■■□□□ 1.69
CAPN1-220ENST00000530567 APLP1P51693 650 aa25.63■■□□□ 1.69
CAPN1-220ENST00000530567 DCP1AQ9NPI6 582 aaPredicted RBP25.63■■□□□ 1.69
CAPN1-220ENST00000530567 DIAPH3Q9NSV4 1193 aa25.63■■□□□ 1.69
CAPN1-220ENST00000530567 FOXP2O15409 715 aa25.62■■□□□ 1.69
CAPN1-220ENST00000530567 CHMLP26374 656 aa25.62■■□□□ 1.69
CAPN1-220ENST00000530567 SUPT20HL1Q3ZLR7 823 aa25.62■■□□□ 1.69
CAPN1-220ENST00000530567 MCMDC2Q4G0Z9 681 aa25.62■■□□□ 1.69
CAPN1-220ENST00000530567 ZNF589Q86UQ0 364 aaPredicted RBP25.62■■□□□ 1.69
CAPN1-220ENST00000530567 SLC4A4Q9Y6R1 1079 aa25.62■■□□□ 1.69
CAPN1-220ENST00000530567 BAZ2AQ9UIF9 1905 aaKnown RBP25.61■■□□□ 1.69
CAPN1-220ENST00000530567 GSG1L2A8MUP6 293 aa25.61■■□□□ 1.69
CAPN1-220ENST00000530567 CWC27Q6UX04 472 aaKnown RBP25.61■■□□□ 1.69
CAPN1-220ENST00000530567 IL25Q9H293 177 aa25.61■■□□□ 1.69
CAPN1-220ENST00000530567 GBA2Q9HCG7 927 aaPredicted RBP25.61■■□□□ 1.69
CAPN1-220ENST00000530567 SAP30BPQ9UHR5 308 aaKnown RBP25.61■■□□□ 1.69
CAPN1-220ENST00000530567 FZD1Q9UP38 647 aa25.61■■□□□ 1.69
CAPN1-220ENST00000530567 TMEM88BA6NKF7 163 aa25.6■■□□□ 1.69
CAPN1-220ENST00000530567 NF2P35240 595 aa25.6■■□□□ 1.69
CAPN1-220ENST00000530567 ZSCAN29Q8IWY8 852 aaPredicted RBP25.6■■□□□ 1.69
CAPN1-220ENST00000530567 CSRNP1Q96S65 589 aa25.6■■□□□ 1.69
CAPN1-220ENST00000530567 EPB41L4AQ9HCS5 686 aaPredicted RBP25.6■■□□□ 1.69
CAPN1-220ENST00000530567 ATP8A2Q9NTI2 1148 aa25.6■■□□□ 1.69
CAPN1-220ENST00000530567 PALD1Q9ULE6 856 aa25.6■■□□□ 1.69
CAPN1-220ENST00000530567 SLURP2P0DP57 97 aa25.59■■□□□ 1.69
CAPN1-220ENST00000530567 GNAT2P19087 354 aa25.59■■□□□ 1.69
CAPN1-220ENST00000530567 MOB2Q70IA6 237 aa25.59■■□□□ 1.69
CAPN1-220ENST00000530567 DHX36Q9H2U1 1008 aaKnown RBP25.58■■□□□ 1.69
CAPN1-220ENST00000530567 CCDC171Q6TFL3 1326 aa25.58■■□□□ 1.69
CAPN1-220ENST00000530567 HSPA6P17066 643 aa25.57■■□□□ 1.68
CAPN1-220ENST00000530567 FKBP1BP68106 108 aa25.57■■□□□ 1.68
CAPN1-220ENST00000530567 EVX2Q03828 476 aa25.57■■□□□ 1.68
CAPN1-220ENST00000530567 PRKG1Q13976 671 aa25.57■■□□□ 1.68
CAPN1-220ENST00000530567 VPS53Q5VIR6 699 aa25.57■■□□□ 1.68
CAPN1-220ENST00000530567 CREBZFQ9NS37 354 aa25.57■■□□□ 1.68
CAPN1-220ENST00000530567 MCM9Q9NXL9 1143 aa25.57■■□□□ 1.68
CAPN1-220ENST00000530567 OTOFQ9HC10 1997 aa25.57■■□□□ 1.68
CAPN1-220ENST00000530567 USP2O75604 605 aaPredicted RBP25.56■■□□□ 1.68
CAPN1-220ENST00000530567 MAP3K10Q02779 954 aa25.56■■□□□ 1.68
CAPN1-220ENST00000530567 MAP3K11Q16584 847 aa25.56■■□□□ 1.68
CAPN1-220ENST00000530567 SLC4A8Q2Y0W8 1093 aa25.56■■□□□ 1.68
CAPN1-220ENST00000530567 MIGA2Q7L4E1 593 aa25.56■■□□□ 1.68
CAPN1-220ENST00000530567 PATL2C9JE40 543 aaKnown RBP25.55■■□□□ 1.68
CAPN1-220ENST00000530567 CYP2D6P10635 497 aa25.55■■□□□ 1.68
CAPN1-220ENST00000530567 GIMAP6Q6P9H5 292 aa25.55■■□□□ 1.68
CAPN1-220ENST00000530567 SAPCD2Q86UD0 394 aa25.55■■□□□ 1.68
CAPN1-220ENST00000530567 C2orf69Q8N8R5 385 aa25.55■■□□□ 1.68
CAPN1-220ENST00000530567 HOOK2Q96ED9 719 aa25.55■■□□□ 1.68
CAPN1-220ENST00000530567 TLL2Q9Y6L7 1015 aa25.55■■□□□ 1.68
CAPN1-220ENST00000530567 RAD50Q92878 1312 aa25.55■■□□□ 1.68
CAPN1-220ENST00000530567 PLCD1P51178 756 aa25.54■■□□□ 1.68
CAPN1-220ENST00000530567 HTRA3P83110 453 aa25.54■■□□□ 1.68
CAPN1-220ENST00000530567 METTL16Q86W50 562 aaKnown RBP25.54■■□□□ 1.68
CAPN1-220ENST00000530567 DNAJC18Q9H819 358 aa25.54■■□□□ 1.68
CAPN1-220ENST00000530567 PI4KBQ9UBF8 816 aa25.54■■□□□ 1.68
CAPN1-220ENST00000530567 ANGEL1Q9UNK9 670 aaKnown RBP25.54■■□□□ 1.68
CAPN1-220ENST00000530567 FAM196BA6NMK8 535 aa25.54■■□□□ 1.68
CAPN1-220ENST00000530567 SMIM22K7EJ46 135 aa25.54■■□□□ 1.68
CAPN1-220ENST00000530567 PPP1R12BO60237 982 aaPredicted RBP25.54■■□□□ 1.68
CAPN1-220ENST00000530567 DCAF15Q66K64 600 aa25.54■■□□□ 1.68
CAPN1-220ENST00000530567 IFNL3Q8IZI9 196 aa25.54■■□□□ 1.68
CAPN1-220ENST00000530567 LAMB1P07942 1786 aa25.53■■□□□ 1.68
CAPN1-220ENST00000530567 CYP2D7A0A087X1C5 515 aa25.53■■□□□ 1.68
CAPN1-220ENST00000530567 USP17L12C9JPN9 530 aa25.53■■□□□ 1.68
CAPN1-220ENST00000530567 USP17L21D6R901 530 aa25.53■■□□□ 1.68
CAPN1-220ENST00000530567 UBE2Q2LH0YL09 131 aa25.53■■□□□ 1.68
CAPN1-220ENST00000530567 SGSM2O43147 1006 aa25.53■■□□□ 1.68
CAPN1-220ENST00000530567 TBC1D12O60347 775 aa25.53■■□□□ 1.68
CAPN1-220ENST00000530567 HSPD1P10809 573 aaKnown RBP25.53■■□□□ 1.68
CAPN1-220ENST00000530567 TTLL12Q14166 644 aaPredicted RBP25.53■■□□□ 1.68
CAPN1-220ENST00000530567 LDLRAD1Q5T700 205 aa25.53■■□□□ 1.68
CAPN1-220ENST00000530567 CTR9Q6PD62 1173 aa25.53■■□□□ 1.68
CAPN1-220ENST00000530567 ARMC9Q7Z3E5 817 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms