RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 REC114Q7Z4M0 266 aa9.44□□□□□ -0.9
CASP4-208ENST00000530309 ALYREFQ86V81 257 aaKnown RBP9.44□□□□□ -0.9
CASP4-208ENST00000530309 NACC1Q96RE7 527 aa9.44□□□□□ -0.9
CASP4-208ENST00000530309 SUGCTQ9HAC7 445 aa9.44□□□□□ -0.9
CASP4-208ENST00000530309 CYP4F12Q9HCS2 524 aa9.44□□□□□ -0.9
CASP4-208ENST00000530309 USP21Q9UK80 565 aa9.44□□□□□ -0.9
CASP4-208ENST00000530309 GFRA2O00451 464 aa9.43□□□□□ -0.9
CASP4-208ENST00000530309 CDK8P49336 464 aa9.43□□□□□ -0.9
CASP4-208ENST00000530309 COL9A2Q14055 689 aaPredicted RBP9.43□□□□□ -0.9
CASP4-208ENST00000530309 INPP5AQ14642 412 aa9.43□□□□□ -0.9
CASP4-208ENST00000530309 LRFN4Q6PJG9 635 aa9.43□□□□□ -0.9
CASP4-208ENST00000530309 SMG8Q8ND04 991 aaKnown RBP9.43□□□□□ -0.9
CASP4-208ENST00000530309 PLPPR2Q96GM1 343 aa9.43□□□□□ -0.9
CASP4-208ENST00000530309 GINM1Q9NU53 330 aa9.43□□□□□ -0.9
CASP4-208ENST00000530309 PRKAG2Q9UGJ0 569 aa9.43□□□□□ -0.9
CASP4-208ENST00000530309 EFR3BQ9Y2G0 817 aa9.43□□□□□ -0.9
CASP4-208ENST00000530309 PCDHGC5Q9Y5F6 944 aa9.43□□□□□ -0.9
CASP4-208ENST00000530309 C9orf172C9J069 976 aa9.42□□□□□ -0.9
CASP4-208ENST00000530309 APBA3O96018 575 aa9.42□□□□□ -0.9
CASP4-208ENST00000530309 SOX9P48436 509 aa9.42□□□□□ -0.9
CASP4-208ENST00000530309 NRG1Q02297 640 aaPredicted RBP9.42□□□□□ -0.9
CASP4-208ENST00000530309 AKAP4Q5JQC9 854 aa9.42□□□□□ -0.9
CASP4-208ENST00000530309 WIPI1Q5MNZ9 446 aaPredicted RBP9.42□□□□□ -0.9
CASP4-208ENST00000530309 AGGF1Q8N302 714 aaeCLIP9.42□□□□□ -0.9
CASP4-208ENST00000530309 ELMO3Q96BJ8 720 aa9.42□□□□□ -0.9
CASP4-208ENST00000530309 TANGO6Q9C0B7 1094 aa9.42□□□□□ -0.9
CASP4-208ENST00000530309 AKTIPQ9H8T0 292 aa9.42□□□□□ -0.9
CASP4-208ENST00000530309 DCDC2CA8MYV0 355 aa9.41□□□□□ -0.9
CASP4-208ENST00000530309 NASPP49321 788 aaPredicted RBP9.41□□□□□ -0.9
CASP4-208ENST00000530309 ID3Q02535 119 aa9.41□□□□□ -0.9
CASP4-208ENST00000530309 ANKRD34AQ69YU3 496 aa9.41□□□□□ -0.9
CASP4-208ENST00000530309 C12orf50Q8NA57 414 aaPredicted RBP9.41□□□□□ -0.9
CASP4-208ENST00000530309 DRC1Q96MC2 740 aa9.41□□□□□ -0.9
CASP4-208ENST00000530309 BRMS1Q9HCU9 246 aa9.41□□□□□ -0.9
CASP4-208ENST00000530309 PPP1R9AQ9ULJ8 1098 aa9.41□□□□□ -0.9
CASP4-208ENST00000530309 ALX3O95076 343 aa9.4□□□□□ -0.9
CASP4-208ENST00000530309 ADH5P11766 374 aa9.4□□□□□ -0.9
CASP4-208ENST00000530309 MCM4P33991 863 aa9.4□□□□□ -0.9
CASP4-208ENST00000530309 ZNF165P49910 485 aa9.4□□□□□ -0.9
CASP4-208ENST00000530309 ERVK-24P63145 666 aa9.4□□□□□ -0.9
CASP4-208ENST00000530309 FDX2Q6P4F2 183 aa9.4□□□□□ -0.9
CASP4-208ENST00000530309 CYFIP1Q7L576 1253 aa9.4□□□□□ -0.9
CASP4-208ENST00000530309 REXO1Q8N1G1 1221 aaKnown RBP9.4□□□□□ -0.9
CASP4-208ENST00000530309 CRIM1Q9NZV1 1036 aa9.4□□□□□ -0.9
CASP4-208ENST00000530309 TACC3Q9Y6A5 838 aa9.4□□□□□ -0.9
CASP4-208ENST00000530309 TMPRSS2O15393 492 aa9.39□□□□□ -0.91
CASP4-208ENST00000530309 TIAF1O95411 115 aa9.39□□□□□ -0.91
CASP4-208ENST00000530309 SOX4Q06945 474 aaPredicted RBP9.39□□□□□ -0.91
CASP4-208ENST00000530309 C12orf40Q86WS4 652 aa9.39□□□□□ -0.91
CASP4-208ENST00000530309 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.39□□□□□ -0.91
CASP4-208ENST00000530309 USP35Q9P2H5 1018 aa9.39□□□□□ -0.91
CASP4-208ENST00000530309 STK17AQ9UEE5 414 aa9.39□□□□□ -0.91
CASP4-208ENST00000530309 POLR3KQ9Y2Y1 108 aaPredicted RBP9.39□□□□□ -0.91
CASP4-208ENST00000530309 CSADQ9Y600 493 aa9.39□□□□□ -0.91
CASP4-208ENST00000530309 RNF225M0QZC1 329 aaPredicted RBP9.38□□□□□ -0.91
CASP4-208ENST00000530309 FGRP09769 529 aa9.38□□□□□ -0.91
CASP4-208ENST00000530309 DRD2P14416 443 aa9.38□□□□□ -0.91
CASP4-208ENST00000530309 ATP2B1P20020 1258 aa9.38□□□□□ -0.91
CASP4-208ENST00000530309 RING1Q06587 406 aa9.38□□□□□ -0.91
CASP4-208ENST00000530309 MCF2L2Q86YR7 1114 aa9.38□□□□□ -0.91
CASP4-208ENST00000530309 AP4E1Q9UPM8 1137 aa9.38□□□□□ -0.91
CASP4-208ENST00000530309 HIF3AQ9Y2N7 669 aa9.38□□□□□ -0.91
CASP4-208ENST00000530309 PRR36Q9H6K5 1346 aa9.37□□□□□ -0.91
CASP4-208ENST00000530309 GRIN3BO60391 1043 aa9.37□□□□□ -0.91
CASP4-208ENST00000530309 Q6ZS46 218 aa9.37□□□□□ -0.91
CASP4-208ENST00000530309 GK5Q6ZS86 529 aa9.37□□□□□ -0.91
CASP4-208ENST00000530309 WFDC12Q8WWY7 111 aa9.37□□□□□ -0.91
CASP4-208ENST00000530309 FANCD2OSQ96PS1 177 aa9.37□□□□□ -0.91
CASP4-208ENST00000530309 CEP41Q9BYV8 373 aa9.37□□□□□ -0.91
CASP4-208ENST00000530309 ATXN3LQ9H3M9 355 aa9.37□□□□□ -0.91
CASP4-208ENST00000530309 EHMT1Q9H9B1 1298 aa9.37□□□□□ -0.91
CASP4-208ENST00000530309 DISC1Q9NRI5 854 aa9.37□□□□□ -0.91
CASP4-208ENST00000530309 STRIP2Q9ULQ0 834 aa9.37□□□□□ -0.91
CASP4-208ENST00000530309 PRAMEF27A3QJZ7 478 aa9.36□□□□□ -0.91
CASP4-208ENST00000530309 GLB1P16278 677 aa9.36□□□□□ -0.91
CASP4-208ENST00000530309 NOS3P29474 1203 aa9.36□□□□□ -0.91
CASP4-208ENST00000530309 IREB2P48200 963 aaKnown RBP9.36□□□□□ -0.91
CASP4-208ENST00000530309 CLCQ05315 142 aa9.36□□□□□ -0.91
CASP4-208ENST00000530309 ADGRE1Q14246 886 aa9.36□□□□□ -0.91
CASP4-208ENST00000530309 MBTPS1Q14703 1052 aa9.36□□□□□ -0.91
CASP4-208ENST00000530309 PPM1JQ5JR12 505 aa9.36□□□□□ -0.91
CASP4-208ENST00000530309 DYMQ7RTS9 669 aa9.36□□□□□ -0.91
CASP4-208ENST00000530309 PICK1Q9NRD5 415 aa9.36□□□□□ -0.91
CASP4-208ENST00000530309 PPP1R1BQ9UD71 204 aaPredicted RBP9.36□□□□□ -0.91
CASP4-208ENST00000530309 PPT2Q9UMR5 302 aa9.36□□□□□ -0.91
CASP4-208ENST00000530309 PCDHB14Q9Y5E9 798 aa9.36□□□□□ -0.91
CASP4-208ENST00000530309 FANCGO15287 622 aa9.35□□□□□ -0.91
CASP4-208ENST00000530309 ATE1O95260 518 aa9.35□□□□□ -0.91
CASP4-208ENST00000530309 SSBP05455 408 aaKnown RBP eCLIP9.35□□□□□ -0.91
CASP4-208ENST00000530309 PDE4BQ07343 736 aa9.35□□□□□ -0.91
CASP4-208ENST00000530309 ZBTB37Q5TC79 503 aa9.35□□□□□ -0.91
CASP4-208ENST00000530309 C2CD4AQ8NCU7 369 aaPredicted RBP9.35□□□□□ -0.91
CASP4-208ENST00000530309 RNF214Q8ND24 703 aa9.35□□□□□ -0.91
CASP4-208ENST00000530309 CPLX3Q8WVH0 158 aa9.35□□□□□ -0.91
CASP4-208ENST00000530309 FERD3LQ96RJ6 166 aa9.35□□□□□ -0.91
CASP4-208ENST00000530309 GSX1Q9H4S2 264 aaPredicted RBP9.35□□□□□ -0.91
CASP4-208ENST00000530309 CORINQ9Y5Q5 1042 aa9.35□□□□□ -0.91
CASP4-208ENST00000530309 SART1O43290 800 aaKnown RBP9.34□□□□□ -0.91
CASP4-208ENST00000530309 IGSF3O75054 1194 aa9.34□□□□□ -0.91
CASP4-208ENST00000530309 HTR3BO95264 441 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms