RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 CROCC2H7BZ55 1655 aa7.72□□□□□ -1.17
AMBRA1-209ENST00000529963 ARHGAP23Q9P227 1491 aa7.72□□□□□ -1.17
AMBRA1-209ENST00000529963 FAM229AH3BQW9 127 aa7.72□□□□□ -1.17
AMBRA1-209ENST00000529963 USP17L7P0C7H9 530 aa7.72□□□□□ -1.17
AMBRA1-209ENST00000529963 EIF4BP23588 611 aaKnown RBP7.72□□□□□ -1.17
AMBRA1-209ENST00000529963 LTKP29376 864 aa7.72□□□□□ -1.17
AMBRA1-209ENST00000529963 TRAPPC3LQ5T215 181 aa7.72□□□□□ -1.17
AMBRA1-209ENST00000529963 HGSNATQ68CP4 663 aa7.72□□□□□ -1.17
AMBRA1-209ENST00000529963 DTHD1Q6ZMT9 781 aa7.72□□□□□ -1.17
AMBRA1-209ENST00000529963 TMC4Q7Z404 712 aa7.72□□□□□ -1.17
AMBRA1-209ENST00000529963 BSNDQ8WZ55 320 aa7.72□□□□□ -1.17
AMBRA1-209ENST00000529963 PLVAPQ9BX97 442 aa7.72□□□□□ -1.17
AMBRA1-209ENST00000529963 VTI1BQ9UEU0 232 aa7.72□□□□□ -1.17
AMBRA1-209ENST00000529963 SOX13Q9UN79 622 aa7.72□□□□□ -1.17
AMBRA1-209ENST00000529963 TRAK1Q9UPV9 953 aa7.72□□□□□ -1.17
AMBRA1-209ENST00000529963 AKAP2Q9Y2D5 859 aa7.72□□□□□ -1.17
AMBRA1-209ENST00000529963 FGD6Q6ZV73 1430 aa7.71□□□□□ -1.17
AMBRA1-209ENST00000529963 ZNF157P51786 506 aaPredicted RBP7.71□□□□□ -1.18
AMBRA1-209ENST00000529963 FGD1P98174 961 aa7.71□□□□□ -1.18
AMBRA1-209ENST00000529963 PRPF40BQ6NWY9 871 aaKnown RBP7.71□□□□□ -1.18
AMBRA1-209ENST00000529963 VN1R5Q7Z5H4 357 aa7.71□□□□□ -1.18
AMBRA1-209ENST00000529963 CARD10Q9BWT7 1032 aa7.71□□□□□ -1.18
AMBRA1-209ENST00000529963 ADAM19Q9H013 955 aa7.71□□□□□ -1.18
AMBRA1-209ENST00000529963 PRDM6Q9NQX0 595 aa7.71□□□□□ -1.18
AMBRA1-209ENST00000529963 CFAP65Q6ZU64 1925 aaKnown RBP7.71□□□□□ -1.18
AMBRA1-209ENST00000529963 TMEM2Q9UHN6 1383 aa7.71□□□□□ -1.18
AMBRA1-209ENST00000529963 SORBS3O60504 671 aa7.7□□□□□ -1.18
AMBRA1-209ENST00000529963 FBXO24O75426 580 aa7.7□□□□□ -1.18
AMBRA1-209ENST00000529963 ZNF772Q68DY9 489 aaPredicted RBP7.7□□□□□ -1.18
AMBRA1-209ENST00000529963 SLC7A3Q8WY07 619 aa7.7□□□□□ -1.18
AMBRA1-209ENST00000529963 MRRFQ96E11 262 aaKnown RBP7.7□□□□□ -1.18
AMBRA1-209ENST00000529963 PPP4R2Q9NY27 417 aa7.7□□□□□ -1.18
AMBRA1-209ENST00000529963 MKL2Q9ULH7 1088 aa7.7□□□□□ -1.18
AMBRA1-209ENST00000529963 PPME1Q9Y570 386 aa7.7□□□□□ -1.18
AMBRA1-209ENST00000529963 STRCP1A6NGW2 1772 aa7.7□□□□□ -1.18
AMBRA1-209ENST00000529963 FAM135BQ49AJ0 1406 aa7.7□□□□□ -1.18
AMBRA1-209ENST00000529963 LMTK2Q8IWU2 1503 aa7.7□□□□□ -1.18
AMBRA1-209ENST00000529963 FAM177BA6PVY3 158 aa7.69□□□□□ -1.18
AMBRA1-209ENST00000529963 CTSHP09668 335 aa7.69□□□□□ -1.18
AMBRA1-209ENST00000529963 C3orf58Q8NDZ4 430 aa7.69□□□□□ -1.18
AMBRA1-209ENST00000529963 KIAA1522Q9P206 1035 aaPredicted RBP7.69□□□□□ -1.18
AMBRA1-209ENST00000529963 EFCAB6Q5THR3 1501 aa7.69□□□□□ -1.18
AMBRA1-209ENST00000529963 GNB5O14775 395 aa7.68□□□□□ -1.18
AMBRA1-209ENST00000529963 ITPKAP23677 461 aa7.68□□□□□ -1.18
AMBRA1-209ENST00000529963 FAAP100Q0VG06 881 aa7.68□□□□□ -1.18
AMBRA1-209ENST00000529963 IDI1Q13907 227 aa7.68□□□□□ -1.18
AMBRA1-209ENST00000529963 ZNF423Q2M1K9 1284 aa7.68□□□□□ -1.18
AMBRA1-209ENST00000529963 MEI1Q5TIA1 1274 aa7.68□□□□□ -1.18
AMBRA1-209ENST00000529963 PODNQ7Z5L7 613 aa7.68□□□□□ -1.18
AMBRA1-209ENST00000529963 FRMD6Q96NE9 622 aa7.68□□□□□ -1.18
AMBRA1-209ENST00000529963 ZNF576Q9H609 170 aa7.68□□□□□ -1.18
AMBRA1-209ENST00000529963 FAM8A1Q9UBU6 413 aa7.68□□□□□ -1.18
AMBRA1-209ENST00000529963 PIK3C2BO00750 1634 aa7.68□□□□□ -1.18
AMBRA1-209ENST00000529963 KDM5AP29375 1690 aaKnown RBP7.68□□□□□ -1.18
AMBRA1-209ENST00000529963 SOX1O00570 391 aaPredicted RBP7.68□□□□□ -1.18
AMBRA1-209ENST00000529963 GIPC1O14908 333 aa7.68□□□□□ -1.18
AMBRA1-209ENST00000529963 GSTT1P30711 240 aa7.68□□□□□ -1.18
AMBRA1-209ENST00000529963 MRPL58Q14197 206 aaKnown RBP7.68□□□□□ -1.18
AMBRA1-209ENST00000529963 BEND7Q8N7W2 519 aaPredicted RBP7.68□□□□□ -1.18
AMBRA1-209ENST00000529963 SLC52A1Q9NWF4 448 aa7.68□□□□□ -1.18
AMBRA1-209ENST00000529963 ADGRL2O95490 1459 aa7.67□□□□□ -1.18
AMBRA1-209ENST00000529963 NOS1P29475 1434 aa7.67□□□□□ -1.18
AMBRA1-209ENST00000529963 TMEM94Q12767 1356 aa7.67□□□□□ -1.18
AMBRA1-209ENST00000529963 A0A0A0MRY4 1105 aa7.67□□□□□ -1.18
AMBRA1-209ENST00000529963 H3BRJ5 948 aa7.67□□□□□ -1.18
AMBRA1-209ENST00000529963 DEAF1O75398 565 aaPredicted RBP7.67□□□□□ -1.18
AMBRA1-209ENST00000529963 KCNA6P17658 529 aa7.67□□□□□ -1.18
AMBRA1-209ENST00000529963 CABP4P57796 275 aa7.67□□□□□ -1.18
AMBRA1-209ENST00000529963 PCDH1Q08174 1060 aa7.67□□□□□ -1.18
AMBRA1-209ENST00000529963 IKBKEQ14164 716 aa7.67□□□□□ -1.18
AMBRA1-209ENST00000529963 TPTE2Q6XPS3 522 aa7.67□□□□□ -1.18
AMBRA1-209ENST00000529963 SRCIN1Q9C0H9 1055 aa7.67□□□□□ -1.18
AMBRA1-209ENST00000529963 CLEC4MQ9H2X3 399 aaPredicted RBP7.67□□□□□ -1.18
AMBRA1-209ENST00000529963 ADGRB3O60242 1522 aa7.66□□□□□ -1.18
AMBRA1-209ENST00000529963 CDK12Q9NYV4 1490 aaPredicted RBP7.66□□□□□ -1.18
AMBRA1-209ENST00000529963 ESRRAP11474 423 aaPredicted RBP7.66□□□□□ -1.18
AMBRA1-209ENST00000529963 FAM50AQ14320 339 aaKnown RBP7.66□□□□□ -1.18
AMBRA1-209ENST00000529963 SETDB1Q15047 1291 aa7.66□□□□□ -1.18
AMBRA1-209ENST00000529963 TSNAXIP1Q2TAA8 658 aa7.66□□□□□ -1.18
AMBRA1-209ENST00000529963 MEX3CQ5U5Q3 659 aaKnown RBP7.66□□□□□ -1.18
AMBRA1-209ENST00000529963 GALNT11Q8NCW6 608 aa7.66□□□□□ -1.18
AMBRA1-209ENST00000529963 SLC26A8Q96RN1 970 aa7.66□□□□□ -1.18
AMBRA1-209ENST00000529963 BACH2Q9BYV9 841 aa7.66□□□□□ -1.18
AMBRA1-209ENST00000529963 RPRD2Q5VT52 1461 aaKnown RBP7.65□□□□□ -1.18
AMBRA1-209ENST00000529963 ANKRD50Q9ULJ7 1429 aa7.65□□□□□ -1.18
AMBRA1-209ENST00000529963 JCADQ9P266 1359 aa7.65□□□□□ -1.18
AMBRA1-209ENST00000529963 FSCN2O14926 492 aa7.65□□□□□ -1.18
AMBRA1-209ENST00000529963 DDX3YO15523 660 aaKnown RBP7.65□□□□□ -1.18
AMBRA1-209ENST00000529963 RXRBP28702 533 aa7.65□□□□□ -1.18
AMBRA1-209ENST00000529963 LDLRAD1Q5T700 205 aa7.65□□□□□ -1.18
AMBRA1-209ENST00000529963 KLHDC7BQ96G42 594 aa7.65□□□□□ -1.18
AMBRA1-209ENST00000529963 GPN3Q9UHW5 284 aaPredicted RBP7.65□□□□□ -1.18
AMBRA1-209ENST00000529963 TTF2Q9UNY4 1162 aaKnown RBP7.65□□□□□ -1.18
AMBRA1-209ENST00000529963 NKTRP30414 1462 aaKnown RBP7.65□□□□□ -1.19
AMBRA1-209ENST00000529963 COL8A1P27658 744 aa7.64□□□□□ -1.19
AMBRA1-209ENST00000529963 GRIK4Q16099 956 aa7.64□□□□□ -1.19
AMBRA1-209ENST00000529963 FAM117BQ6P1L5 589 aa7.64□□□□□ -1.19
AMBRA1-209ENST00000529963 CACTIN-AS1Q8N1I8 211 aa7.64□□□□□ -1.19
AMBRA1-209ENST00000529963 SCARF2Q96GP6 870 aaPredicted RBP7.64□□□□□ -1.19
AMBRA1-209ENST00000529963 SEC31BQ9NQW1 1179 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms