RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 STK17AQ9UEE5 414 aa6.09□□□□□ -1.43
SVIP-203ENST00000529848 SNCAIPQ9Y6H5 919 aa6.09□□□□□ -1.43
SVIP-203ENST00000529848 AOC2O75106 756 aa6.08□□□□□ -1.44
SVIP-203ENST00000529848 ELNP15502 786 aa6.08□□□□□ -1.44
SVIP-203ENST00000529848 FBXW10Q5XX13 1052 aa6.08□□□□□ -1.44
SVIP-203ENST00000529848 IGF2-ASQ6U949 168 aa6.08□□□□□ -1.44
SVIP-203ENST00000529848 GK5Q6ZS86 529 aa6.08□□□□□ -1.44
SVIP-203ENST00000529848 BEND7Q8N7W2 519 aaPredicted RBP6.08□□□□□ -1.44
SVIP-203ENST00000529848 WDR89Q96FK6 387 aaPredicted RBP6.08□□□□□ -1.44
SVIP-203ENST00000529848 PLPPR2Q96GM1 343 aa6.08□□□□□ -1.44
SVIP-203ENST00000529848 WDR18Q9BV38 432 aa6.08□□□□□ -1.44
SVIP-203ENST00000529848 SRRTQ9BXP5 876 aaKnown RBP6.08□□□□□ -1.44
SVIP-203ENST00000529848 ADAMTS8Q9UP79 889 aa6.08□□□□□ -1.44
SVIP-203ENST00000529848 DCDC2CA8MYV0 355 aa6.07□□□□□ -1.44
SVIP-203ENST00000529848 GRIN3BO60391 1043 aa6.07□□□□□ -1.44
SVIP-203ENST00000529848 AKAP4Q5JQC9 854 aa6.07□□□□□ -1.44
SVIP-203ENST00000529848 NUTM2GQ5VZR2 741 aa6.07□□□□□ -1.44
SVIP-203ENST00000529848 LRFN4Q6PJG9 635 aa6.07□□□□□ -1.44
SVIP-203ENST00000529848 REXO1Q8N1G1 1221 aaKnown RBP6.07□□□□□ -1.44
SVIP-203ENST00000529848 CRBNQ96SW2 442 aa6.07□□□□□ -1.44
SVIP-203ENST00000529848 DNAJC2Q99543 621 aaKnown RBP6.07□□□□□ -1.44
SVIP-203ENST00000529848 HIRIP3Q9BW71 556 aaPredicted RBP6.07□□□□□ -1.44
SVIP-203ENST00000529848 MRPL18Q9H0U6 180 aaKnown RBP6.07□□□□□ -1.44
SVIP-203ENST00000529848 RNF208Q9H0X6 261 aa6.07□□□□□ -1.44
SVIP-203ENST00000529848 CYP4F12Q9HCS2 524 aa6.07□□□□□ -1.44
SVIP-203ENST00000529848 PICK1Q9NRD5 415 aa6.07□□□□□ -1.44
SVIP-203ENST00000529848 PCDHB14Q9Y5E9 798 aa6.07□□□□□ -1.44
SVIP-203ENST00000529848 SYNGAP1Q96PV0 1343 aa6.06□□□□□ -1.44
SVIP-203ENST00000529848 PRAMEF27A3QJZ7 478 aa6.06□□□□□ -1.44
SVIP-203ENST00000529848 WISP1O95388 367 aa6.06□□□□□ -1.44
SVIP-203ENST00000529848 DLGAP3O95886 979 aa6.06□□□□□ -1.44
SVIP-203ENST00000529848 IMPDH2P12268 514 aa6.06□□□□□ -1.44
SVIP-203ENST00000529848 CDK8P49336 464 aa6.06□□□□□ -1.44
SVIP-203ENST00000529848 ID3Q02535 119 aa6.06□□□□□ -1.44
SVIP-203ENST00000529848 PDE4BQ07343 736 aa6.06□□□□□ -1.44
SVIP-203ENST00000529848 MLECQ14165 292 aa6.06□□□□□ -1.44
SVIP-203ENST00000529848 INPP5AQ14642 412 aa6.06□□□□□ -1.44
SVIP-203ENST00000529848 SOGA3Q5TF21 947 aa6.06□□□□□ -1.44
SVIP-203ENST00000529848 CCDC81Q6ZN84 652 aa6.06□□□□□ -1.44
SVIP-203ENST00000529848 ANAPC16Q96DE5 110 aa6.06□□□□□ -1.44
SVIP-203ENST00000529848 TMPRSS13Q9BYE2 586 aa6.06□□□□□ -1.44
SVIP-203ENST00000529848 PPT2Q9UMR5 302 aa6.06□□□□□ -1.44
SVIP-203ENST00000529848 AP4E1Q9UPM8 1137 aa6.06□□□□□ -1.44
SVIP-203ENST00000529848 CSADQ9Y600 493 aa6.06□□□□□ -1.44
SVIP-203ENST00000529848 MRVI1Q9Y6F6 885 aa6.06□□□□□ -1.44
SVIP-203ENST00000529848 CNTNAP5Q8WYK1 1306 aa6.05□□□□□ -1.44
SVIP-203ENST00000529848 MEGF11A6BM72 1044 aa6.05□□□□□ -1.44
SVIP-203ENST00000529848 GFRA2O00451 464 aa6.05□□□□□ -1.44
SVIP-203ENST00000529848 SPATA31C1P0DKV0 1188 aa6.05□□□□□ -1.44
SVIP-203ENST00000529848 EIF6P56537 245 aaKnown RBP6.05□□□□□ -1.44
SVIP-203ENST00000529848 CLCQ05315 142 aa6.05□□□□□ -1.44
SVIP-203ENST00000529848 FDX2Q6P4F2 183 aa6.05□□□□□ -1.44
SVIP-203ENST00000529848 KIAA1211Q6ZU35 1233 aa6.05□□□□□ -1.44
SVIP-203ENST00000529848 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.05□□□□□ -1.44
SVIP-203ENST00000529848 C12orf40Q86WS4 652 aa6.05□□□□□ -1.44
SVIP-203ENST00000529848 CKAP2LQ8IYA6 745 aa6.05□□□□□ -1.44
SVIP-203ENST00000529848 PMFBP1Q8TBY8 1022 aa6.05□□□□□ -1.44
SVIP-203ENST00000529848 SCARF2Q96GP6 870 aaPredicted RBP6.05□□□□□ -1.44
SVIP-203ENST00000529848 ZNF408Q9H9D4 720 aa6.05□□□□□ -1.44
SVIP-203ENST00000529848 POLR3KQ9Y2Y1 108 aaPredicted RBP6.05□□□□□ -1.44
SVIP-203ENST00000529848 R3HCC1Q9Y3T6 440 aaKnown RBP6.05□□□□□ -1.44
SVIP-203ENST00000529848 TACC3Q9Y6A5 838 aa6.05□□□□□ -1.44
SVIP-203ENST00000529848 TMPRSS2O15393 492 aa6.04□□□□□ -1.44
SVIP-203ENST00000529848 SELPP16109 830 aa6.04□□□□□ -1.44
SVIP-203ENST00000529848 PLCG1P19174 1290 aa6.04□□□□□ -1.44
SVIP-203ENST00000529848 GSK3AP49840 483 aa6.04□□□□□ -1.44
SVIP-203ENST00000529848 ERVK-24P63145 666 aa6.04□□□□□ -1.44
SVIP-203ENST00000529848 GRIK4Q16099 956 aa6.04□□□□□ -1.44
SVIP-203ENST00000529848 ZC3H12AQ5D1E8 599 aaKnown RBP6.04□□□□□ -1.44
SVIP-203ENST00000529848 CYFIP1Q7L576 1253 aa6.04□□□□□ -1.44
SVIP-203ENST00000529848 OR6P1Q8NGX9 317 aa6.04□□□□□ -1.44
SVIP-203ENST00000529848 NACC1Q96RE7 527 aa6.04□□□□□ -1.44
SVIP-203ENST00000529848 ATXN3LQ9H3M9 355 aa6.04□□□□□ -1.44
SVIP-203ENST00000529848 EHMT1Q9H9B1 1298 aa6.04□□□□□ -1.44
SVIP-203ENST00000529848 USP21Q9UK80 565 aa6.04□□□□□ -1.44
SVIP-203ENST00000529848 ZNRF3Q9ULT6 936 aa6.04□□□□□ -1.44
SVIP-203ENST00000529848 HIF3AQ9Y2N7 669 aa6.04□□□□□ -1.44
SVIP-203ENST00000529848 PCDHGC5Q9Y5F6 944 aa6.04□□□□□ -1.44
SVIP-203ENST00000529848 ATE1O95260 518 aa6.03□□□□□ -1.44
SVIP-203ENST00000529848 APBA3O96018 575 aa6.03□□□□□ -1.44
SVIP-203ENST00000529848 PGRP06401 933 aa6.03□□□□□ -1.44
SVIP-203ENST00000529848 ADH5P11766 374 aa6.03□□□□□ -1.44
SVIP-203ENST00000529848 ETFBP38117 255 aa6.03□□□□□ -1.44
SVIP-203ENST00000529848 ETF1P62495 437 aaKnown RBP6.03□□□□□ -1.44
SVIP-203ENST00000529848 RBL2Q08999 1139 aa6.03□□□□□ -1.44
SVIP-203ENST00000529848 LRRFIP1Q32MZ4 808 aaKnown RBP6.03□□□□□ -1.44
SVIP-203ENST00000529848 PPM1JQ5JR12 505 aa6.03□□□□□ -1.44
SVIP-203ENST00000529848 SHISA2Q6UWI4 295 aa6.03□□□□□ -1.44
SVIP-203ENST00000529848 C12orf50Q8NA57 414 aaPredicted RBP6.03□□□□□ -1.44
SVIP-203ENST00000529848 SMG8Q8ND04 991 aaKnown RBP6.03□□□□□ -1.44
SVIP-203ENST00000529848 SUGCTQ9HAC7 445 aa6.03□□□□□ -1.44
SVIP-203ENST00000529848 CRIM1Q9NZV1 1036 aa6.03□□□□□ -1.44
SVIP-203ENST00000529848 PPP1R9AQ9ULJ8 1098 aa6.03□□□□□ -1.44
SVIP-203ENST00000529848 C9orf172C9J069 976 aa6.02□□□□□ -1.45
SVIP-203ENST00000529848 F8W735 103 aaPredicted RBP6.02□□□□□ -1.45
SVIP-203ENST00000529848 SART1O43290 800 aaKnown RBP6.02□□□□□ -1.45
SVIP-203ENST00000529848 HTR3BO95264 441 aa6.02□□□□□ -1.45
SVIP-203ENST00000529848 GRK4P32298 578 aa6.02□□□□□ -1.45
SVIP-203ENST00000529848 GIPRP48546 466 aa6.02□□□□□ -1.45
SVIP-203ENST00000529848 SOX4Q06945 474 aaPredicted RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms