RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 GJD2Q9UKL4 321 aa14.68□□□□□ -0.06
AMBRA1-207ENST00000529553 PNMA3Q9UL41 463 aa14.68□□□□□ -0.06
AMBRA1-207ENST00000529553 PDE8BO95263 885 aa14.67□□□□□ -0.06
AMBRA1-207ENST00000529553 TCP10Q12799 353 aa14.67□□□□□ -0.06
AMBRA1-207ENST00000529553 CCDC27Q2M243 656 aa14.67□□□□□ -0.06
AMBRA1-207ENST00000529553 ANKRD13CQ8N6S4 541 aa14.67□□□□□ -0.06
AMBRA1-207ENST00000529553 SYMPKQ92797 1274 aaKnown RBP14.67□□□□□ -0.06
AMBRA1-207ENST00000529553 C9orf78Q9NZ63 289 aaPredicted RBP14.67□□□□□ -0.06
AMBRA1-207ENST00000529553 FAM198AQ9UFP1 575 aa14.67□□□□□ -0.06
AMBRA1-207ENST00000529553 AGTPBP1Q9UPW5 1226 aa14.67□□□□□ -0.06
AMBRA1-207ENST00000529553 VCANP13611 3396 aa14.67□□□□□ -0.06
AMBRA1-207ENST00000529553 CTNND1O60716 968 aaKnown RBP14.66□□□□□ -0.06
AMBRA1-207ENST00000529553 COL6A1P12109 1028 aa14.66□□□□□ -0.06
AMBRA1-207ENST00000529553 GCLCP48506 637 aaPredicted RBP14.66□□□□□ -0.06
AMBRA1-207ENST00000529553 A0A1B0GUL6 1792 aa14.65□□□□□ -0.06
AMBRA1-207ENST00000529553 SPTBN5Q9NRC6 3674 aaKnown RBP14.65□□□□□ -0.06
AMBRA1-207ENST00000529553 ALDH1L1O75891 902 aa14.65□□□□□ -0.06
AMBRA1-207ENST00000529553 NFIAQ12857 509 aa14.65□□□□□ -0.06
AMBRA1-207ENST00000529553 METTL24Q5JXM2 366 aa14.65□□□□□ -0.06
AMBRA1-207ENST00000529553 SPINK5Q9NQ38 1064 aaPredicted RBP14.65□□□□□ -0.06
AMBRA1-207ENST00000529553 USP40Q9NVE5 1235 aa14.65□□□□□ -0.06
AMBRA1-207ENST00000529553 DAGLAQ9Y4D2 1042 aa14.65□□□□□ -0.06
AMBRA1-207ENST00000529553 IL16Q14005 1332 aa14.65□□□□□ -0.06
AMBRA1-207ENST00000529553 MGAMO43451 1857 aa14.64□□□□□ -0.07
AMBRA1-207ENST00000529553 ENTPD3O75355 529 aa14.64□□□□□ -0.07
AMBRA1-207ENST00000529553 MAP3K21Q5TCX8 1036 aa14.64□□□□□ -0.07
AMBRA1-207ENST00000529553 TRMT44Q8IYL2 757 aaKnown RBP14.64□□□□□ -0.07
AMBRA1-207ENST00000529553 VGLL2Q8N8G2 317 aa14.64□□□□□ -0.07
AMBRA1-207ENST00000529553 PROCA1Q8NCQ7 364 aaPredicted RBP14.64□□□□□ -0.07
AMBRA1-207ENST00000529553 IDI2Q9BXS1 227 aa14.64□□□□□ -0.07
AMBRA1-207ENST00000529553 LRRFIP2Q9Y608 721 aaKnown RBP14.64□□□□□ -0.07
AMBRA1-207ENST00000529553 PFASO15067 1338 aa14.64□□□□□ -0.07
AMBRA1-207ENST00000529553 ATRNL1Q5VV63 1379 aa14.63□□□□□ -0.07
AMBRA1-207ENST00000529553 ALPK3Q96L96 1907 aa14.63□□□□□ -0.07
AMBRA1-207ENST00000529553 F6X3S4 739 aa14.63□□□□□ -0.07
AMBRA1-207ENST00000529553 VAMP4O75379 141 aa14.63□□□□□ -0.07
AMBRA1-207ENST00000529553 IFIT1P09914 478 aaKnown RBP14.63□□□□□ -0.07
AMBRA1-207ENST00000529553 XRCC5P13010 732 aaKnown RBP14.63□□□□□ -0.07
AMBRA1-207ENST00000529553 PABPC4Q13310 644 aaKnown RBP eCLIP14.63□□□□□ -0.07
AMBRA1-207ENST00000529553 NCBP3Q53F19 620 aaKnown RBP14.63□□□□□ -0.07
AMBRA1-207ENST00000529553 ZNF697Q5TEC3 545 aa14.63□□□□□ -0.07
AMBRA1-207ENST00000529553 ZFPM1Q8IX07 1006 aa14.63□□□□□ -0.07
AMBRA1-207ENST00000529553 COL2A1P02458 1487 aaPredicted RBP14.63□□□□□ -0.07
AMBRA1-207ENST00000529553 TRIM75PA6NK02 468 aa14.62□□□□□ -0.07
AMBRA1-207ENST00000529553 FGFR2P21802 821 aa14.62□□□□□ -0.07
AMBRA1-207ENST00000529553 ZEB1P37275 1124 aaPredicted RBP14.62□□□□□ -0.07
AMBRA1-207ENST00000529553 MDM2Q00987 491 aaPredicted RBP14.62□□□□□ -0.07
AMBRA1-207ENST00000529553 TRIM32Q13049 653 aa14.62□□□□□ -0.07
AMBRA1-207ENST00000529553 WWC1Q8IX03 1113 aa14.62□□□□□ -0.07
AMBRA1-207ENST00000529553 KAZALD1Q96I82 304 aa14.62□□□□□ -0.07
AMBRA1-207ENST00000529553 CDX2Q99626 313 aaPredicted RBP14.62□□□□□ -0.07
AMBRA1-207ENST00000529553 TBC1D2Q9BYX2 928 aa14.62□□□□□ -0.07
AMBRA1-207ENST00000529553 PUM3Q15397 648 aaKnown RBP14.61□□□□□ -0.07
AMBRA1-207ENST00000529553 RABL6Q3YEC7 729 aaPredicted RBP14.61□□□□□ -0.07
AMBRA1-207ENST00000529553 LRRC24Q50LG9 513 aa14.61□□□□□ -0.07
AMBRA1-207ENST00000529553 TREML2Q5T2D2 321 aa14.61□□□□□ -0.07
AMBRA1-207ENST00000529553 MAFAQ8NHW3 353 aaPredicted RBP14.61□□□□□ -0.07
AMBRA1-207ENST00000529553 TRIB2Q92519 343 aa14.61□□□□□ -0.07
AMBRA1-207ENST00000529553 SUCLG2Q96I99 432 aa14.61□□□□□ -0.07
AMBRA1-207ENST00000529553 LBHD1Q9BQE6 289 aaPredicted RBP14.61□□□□□ -0.07
AMBRA1-207ENST00000529553 SRCIN1Q9C0H9 1055 aa14.61□□□□□ -0.07
AMBRA1-207ENST00000529553 SEMA6BQ9H3T3 888 aa14.61□□□□□ -0.07
AMBRA1-207ENST00000529553 TBC1D12O60347 775 aa14.6□□□□□ -0.07
AMBRA1-207ENST00000529553 LDHBP07195 334 aaKnown RBP14.6□□□□□ -0.07
AMBRA1-207ENST00000529553 RGS3P49796 1198 aa14.6□□□□□ -0.07
AMBRA1-207ENST00000529553 DIXDC1Q155Q3 683 aa14.6□□□□□ -0.07
AMBRA1-207ENST00000529553 LRRC26Q2I0M4 334 aa14.6□□□□□ -0.07
AMBRA1-207ENST00000529553 LHX8Q68G74 356 aa14.6□□□□□ -0.07
AMBRA1-207ENST00000529553 FAM161BQ96MY7 647 aa14.6□□□□□ -0.07
AMBRA1-207ENST00000529553 MORF4L1Q9UBU8 362 aa14.6□□□□□ -0.07
AMBRA1-207ENST00000529553 UTYO14607 1347 aa14.6□□□□□ -0.07
AMBRA1-207ENST00000529553 ZBTB22O15209 634 aa14.59□□□□□ -0.07
AMBRA1-207ENST00000529553 PRKAR2AP13861 404 aaKnown RBP14.59□□□□□ -0.07
AMBRA1-207ENST00000529553 SH3BP5LQ7L8J4 393 aa14.59□□□□□ -0.07
AMBRA1-207ENST00000529553 ZSCAN29Q8IWY8 852 aaPredicted RBP14.59□□□□□ -0.07
AMBRA1-207ENST00000529553 LPIN2Q92539 896 aa14.59□□□□□ -0.07
AMBRA1-207ENST00000529553 NUDT12Q9BQG2 462 aa14.59□□□□□ -0.07
AMBRA1-207ENST00000529553 SALL1Q9NSC2 1324 aa14.59□□□□□ -0.07
AMBRA1-207ENST00000529553 CYP2B6P20813 491 aa14.58□□□□□ -0.08
AMBRA1-207ENST00000529553 COL9A1P20849 921 aa14.58□□□□□ -0.08
AMBRA1-207ENST00000529553 SOCS4Q8WXH5 440 aa14.58□□□□□ -0.08
AMBRA1-207ENST00000529553 NBPF7P0C2Y1 421 aaPredicted RBP14.57□□□□□ -0.08
AMBRA1-207ENST00000529553 SLC5A1P13866 664 aa14.57□□□□□ -0.08
AMBRA1-207ENST00000529553 PRDX5P30044 214 aa14.57□□□□□ -0.08
AMBRA1-207ENST00000529553 CACNB2Q08289 660 aaPredicted RBP14.57□□□□□ -0.08
AMBRA1-207ENST00000529553 SPP2Q13103 211 aa14.57□□□□□ -0.08
AMBRA1-207ENST00000529553 DDX10Q13206 875 aaKnown RBP14.57□□□□□ -0.08
AMBRA1-207ENST00000529553 SH3D19Q5HYK7 790 aa14.57□□□□□ -0.08
AMBRA1-207ENST00000529553 ZNF280CQ8ND82 737 aa14.57□□□□□ -0.08
AMBRA1-207ENST00000529553 FAM163AQ96GL9 167 aaPredicted RBP14.57□□□□□ -0.08
AMBRA1-207ENST00000529553 OSBPL5Q9H0X9 879 aaPredicted RBP14.57□□□□□ -0.08
AMBRA1-207ENST00000529553 ASCC2Q9H1I8 757 aaPredicted RBP14.57□□□□□ -0.08
AMBRA1-207ENST00000529553 BICC1Q9H694 974 aaKnown RBP14.57□□□□□ -0.08
AMBRA1-207ENST00000529553 GNL3LQ9NVN8 582 aaKnown RBP14.57□□□□□ -0.08
AMBRA1-207ENST00000529553 DDTLA6NHG4 134 aaPredicted RBP14.56□□□□□ -0.08
AMBRA1-207ENST00000529553 SEMA3EO15041 775 aa14.56□□□□□ -0.08
AMBRA1-207ENST00000529553 NPM3O75607 178 aaKnown RBP14.56□□□□□ -0.08
AMBRA1-207ENST00000529553 SMAD3P84022 425 aaKnown RBP14.56□□□□□ -0.08
AMBRA1-207ENST00000529553 SLF2Q8IX21 1173 aa14.56□□□□□ -0.08
AMBRA1-207ENST00000529553 USP6NLQ92738 828 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms