RNA–Protein interactions for RNA: ENST00000529379.1

NUP98-216, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-216ENST00000529379 PREPP48147 710 aa8.1□□□□□ -1.11
NUP98-216ENST00000529379 INPP5AQ14642 412 aa8.1□□□□□ -1.11
NUP98-216ENST00000529379 ZC3H12AQ5D1E8 599 aaKnown RBP8.1□□□□□ -1.11
NUP98-216ENST00000529379 CCDC84Q86UT8 332 aaPredicted RBP8.1□□□□□ -1.11
NUP98-216ENST00000529379 DZIP1LQ8IYY4 767 aaKnown RBP8.1□□□□□ -1.11
NUP98-216ENST00000529379 FAM221AA4D161 298 aa8.09□□□□□ -1.11
NUP98-216ENST00000529379 DCDC2CA8MYV0 355 aa8.09□□□□□ -1.11
NUP98-216ENST00000529379 HNRNPUQ00839 825 aaKnown RBP eCLIP8.09□□□□□ -1.11
NUP98-216ENST00000529379 ID3Q02535 119 aa8.09□□□□□ -1.11
NUP98-216ENST00000529379 LRFN4Q6PJG9 635 aa8.09□□□□□ -1.11
NUP98-216ENST00000529379 C2CD4AQ8NCU7 369 aaPredicted RBP8.09□□□□□ -1.11
NUP98-216ENST00000529379 GATAD2BQ8WXI9 593 aa8.09□□□□□ -1.11
NUP98-216ENST00000529379 FAM46AQ96IP4 442 aaKnown RBP8.09□□□□□ -1.11
NUP98-216ENST00000529379 SPON2Q9BUD6 331 aa8.09□□□□□ -1.11
NUP98-216ENST00000529379 SSBP4Q9BWG4 385 aaPredicted RBP8.09□□□□□ -1.11
NUP98-216ENST00000529379 CEP41Q9BYV8 373 aa8.09□□□□□ -1.11
NUP98-216ENST00000529379 ACBD3Q9H3P7 528 aa8.09□□□□□ -1.11
NUP98-216ENST00000529379 CRIM1Q9NZV1 1036 aa8.09□□□□□ -1.11
NUP98-216ENST00000529379 AP4E1Q9UPM8 1137 aa8.09□□□□□ -1.11
NUP98-216ENST00000529379 SUPT16HQ9Y5B9 1047 aaKnown RBP8.09□□□□□ -1.11
NUP98-216ENST00000529379 CSADQ9Y600 493 aa8.09□□□□□ -1.11
NUP98-216ENST00000529379 CILPO75339 1184 aa8.08□□□□□ -1.12
NUP98-216ENST00000529379 GATA4P43694 442 aa8.08□□□□□ -1.12
NUP98-216ENST00000529379 FAM196AQ6ZSG2 479 aa8.08□□□□□ -1.12
NUP98-216ENST00000529379 C12orf40Q86WS4 652 aa8.08□□□□□ -1.12
NUP98-216ENST00000529379 KIAA0825Q8IV33 1275 aa8.08□□□□□ -1.12
NUP98-216ENST00000529379 FBXO27Q8NI29 283 aa8.08□□□□□ -1.12
NUP98-216ENST00000529379 PLPPR2Q96GM1 343 aa8.08□□□□□ -1.12
NUP98-216ENST00000529379 EAF1Q96JC9 268 aaPredicted RBP8.08□□□□□ -1.12
NUP98-216ENST00000529379 FANCD2OSQ96PS1 177 aa8.08□□□□□ -1.12
NUP98-216ENST00000529379 ACTL7BQ9Y614 415 aa8.08□□□□□ -1.12
NUP98-216ENST00000529379 SART1O43290 800 aaKnown RBP8.07□□□□□ -1.12
NUP98-216ENST00000529379 TNNI2P48788 182 aa8.07□□□□□ -1.12
NUP98-216ENST00000529379 RPL6Q02878 288 aaKnown RBP8.07□□□□□ -1.12
NUP98-216ENST00000529379 DYMQ7RTS9 669 aa8.07□□□□□ -1.12
NUP98-216ENST00000529379 ARMC10Q8N2F6 343 aa8.07□□□□□ -1.12
NUP98-216ENST00000529379 GSX1Q9H4S2 264 aaPredicted RBP8.07□□□□□ -1.12
NUP98-216ENST00000529379 CCSER2Q9H7U1 834 aa8.07□□□□□ -1.12
NUP98-216ENST00000529379 DISC1Q9NRI5 854 aa8.07□□□□□ -1.12
NUP98-216ENST00000529379 GFRA2O00451 464 aa8.06□□□□□ -1.12
NUP98-216ENST00000529379 TLR3O15455 904 aaKnown RBP8.06□□□□□ -1.12
NUP98-216ENST00000529379 CRKP46108 304 aa8.06□□□□□ -1.12
NUP98-216ENST00000529379 RING1Q06587 406 aa8.06□□□□□ -1.12
NUP98-216ENST00000529379 PAK2Q13177 524 aa8.06□□□□□ -1.12
NUP98-216ENST00000529379 PPM1JQ5JR12 505 aa8.06□□□□□ -1.12
NUP98-216ENST00000529379 WIPI1Q5MNZ9 446 aaPredicted RBP8.06□□□□□ -1.12
NUP98-216ENST00000529379 ELMO3Q96BJ8 720 aa8.06□□□□□ -1.12
NUP98-216ENST00000529379 NT5C1AQ9BXI3 368 aa8.06□□□□□ -1.12
NUP98-216ENST00000529379 FAM105AQ9NUU6 356 aa8.06□□□□□ -1.12
NUP98-216ENST00000529379 UBP1Q9NZI7 540 aa8.06□□□□□ -1.12
NUP98-216ENST00000529379 HIF3AQ9Y2N7 669 aa8.06□□□□□ -1.12
NUP98-216ENST00000529379 SNCAIPQ9Y6H5 919 aa8.06□□□□□ -1.12
NUP98-216ENST00000529379 ERVK-24P63145 666 aa8.05□□□□□ -1.12
NUP98-216ENST00000529379 MPP2Q14168 576 aa8.05□□□□□ -1.12
NUP98-216ENST00000529379 CDPF1Q6NVV7 123 aa8.05□□□□□ -1.12
NUP98-216ENST00000529379 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.05□□□□□ -1.12
NUP98-216ENST00000529379 CYFIP1Q7L576 1253 aa8.05□□□□□ -1.12
NUP98-216ENST00000529379 HDXQ7Z353 690 aa8.05□□□□□ -1.12
NUP98-216ENST00000529379 ATXN3LQ9H3M9 355 aa8.05□□□□□ -1.12
NUP98-216ENST00000529379 GAS2O43903 313 aaKnown RBP8.04□□□□□ -1.12
NUP98-216ENST00000529379 BPNT1O95861 308 aa8.04□□□□□ -1.12
NUP98-216ENST00000529379 ASPAP45381 313 aa8.04□□□□□ -1.12
NUP98-216ENST00000529379 TTLL4Q14679 1199 aa8.04□□□□□ -1.12
NUP98-216ENST00000529379 UVSSAQ2YD98 709 aa8.04□□□□□ -1.12
NUP98-216ENST00000529379 SGO2Q562F6 1265 aa8.04□□□□□ -1.12
NUP98-216ENST00000529379 UTP4Q969X6 686 aaKnown RBP8.04□□□□□ -1.12
NUP98-216ENST00000529379 MYRFLQ96LU7 910 aa8.04□□□□□ -1.12
NUP98-216ENST00000529379 LRRC3Q9BY71 257 aa8.04□□□□□ -1.12
NUP98-216ENST00000529379 ROBO2Q9HCK4 1378 aa8.04□□□□□ -1.12
NUP98-216ENST00000529379 PRAMEF27A3QJZ7 478 aa8.03□□□□□ -1.12
NUP98-216ENST00000529379 NEFMP07197 916 aa8.03□□□□□ -1.12
NUP98-216ENST00000529379 REC114Q7Z4M0 266 aa8.03□□□□□ -1.12
NUP98-216ENST00000529379 RNF214Q8ND24 703 aa8.03□□□□□ -1.12
NUP98-216ENST00000529379 TP53INP1Q96A56 240 aa8.03□□□□□ -1.12
NUP98-216ENST00000529379 TPSG1Q9NRR2 321 aa8.03□□□□□ -1.12
NUP98-216ENST00000529379 POLR3KQ9Y2Y1 108 aaPredicted RBP8.03□□□□□ -1.12
NUP98-216ENST00000529379 BMP3P12645 472 aa8.02□□□□□ -1.13
NUP98-216ENST00000529379 HCLS1P14317 486 aaPredicted RBP8.02□□□□□ -1.13
NUP98-216ENST00000529379 NTF4P34130 210 aa8.02□□□□□ -1.13
NUP98-216ENST00000529379 GJA8P48165 433 aa8.02□□□□□ -1.13
NUP98-216ENST00000529379 USP11P51784 963 aa8.02□□□□□ -1.13
NUP98-216ENST00000529379 APOBRQ0VD83 1088 aa8.02□□□□□ -1.13
NUP98-216ENST00000529379 ZBTB37Q5TC79 503 aa8.02□□□□□ -1.13
NUP98-216ENST00000529379 FBLIM1Q8WUP2 373 aa8.02□□□□□ -1.13
NUP98-216ENST00000529379 NKD1Q969G9 470 aa8.02□□□□□ -1.13
NUP98-216ENST00000529379 TINF2Q9BSI4 451 aa8.02□□□□□ -1.13
NUP98-216ENST00000529379 CAPN10Q9HC96 672 aa8.02□□□□□ -1.13
NUP98-216ENST00000529379 INPP5FQ9Y2H2 1132 aa8.02□□□□□ -1.13
NUP98-216ENST00000529379 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.01□□□□□ -1.13
NUP98-216ENST00000529379 RAB6AP20340 208 aa8.01□□□□□ -1.13
NUP98-216ENST00000529379 DOC2BQ14184 412 aa8.01□□□□□ -1.13
NUP98-216ENST00000529379 SEZ6Q53EL9 994 aa8.01□□□□□ -1.13
NUP98-216ENST00000529379 DIEXFQ68CQ4 756 aaKnown RBP8.01□□□□□ -1.13
NUP98-216ENST00000529379 SLITRK4Q8IW52 837 aa8.01□□□□□ -1.13
NUP98-216ENST00000529379 FAM20CQ8IXL6 584 aa8.01□□□□□ -1.13
NUP98-216ENST00000529379 GPRASP2Q96D09 838 aa8.01□□□□□ -1.13
NUP98-216ENST00000529379 ACSS3Q9H6R3 686 aa8.01□□□□□ -1.13
NUP98-216ENST00000529379 BRMS1Q9HCU9 246 aa8.01□□□□□ -1.13
NUP98-216ENST00000529379 CORINQ9Y5Q5 1042 aa8.01□□□□□ -1.13
NUP98-216ENST00000529379 FANCGO15287 622 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms