RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 DCAF8Q5TAQ9 597 aa9.05□□□□□ -0.96
SOX6-211ENST00000528429 ZC3H12CQ9C0D7 883 aaKnown RBP9.05□□□□□ -0.96
SOX6-211ENST00000528429 PDS5AQ29RF7 1337 aaKnown RBP9.05□□□□□ -0.96
SOX6-211ENST00000528429 KLF18A0A0U1RQI7 1052 aa9.05□□□□□ -0.96
SOX6-211ENST00000528429 SMIM22K7EJ46 135 aa9.05□□□□□ -0.96
SOX6-211ENST00000528429 SCRN1Q12765 414 aa9.05□□□□□ -0.96
SOX6-211ENST00000528429 LARP1BQ659C4 914 aaKnown RBP9.05□□□□□ -0.96
SOX6-211ENST00000528429 MFSD6Q6ZSS7 791 aa9.05□□□□□ -0.96
SOX6-211ENST00000528429 CYB5R4Q7L1T6 521 aa9.05□□□□□ -0.96
SOX6-211ENST00000528429 TMC4Q7Z404 712 aa9.05□□□□□ -0.96
SOX6-211ENST00000528429 GOLGA8BA8MQT2 603 aa9.04□□□□□ -0.96
SOX6-211ENST00000528429 GTF2IP78347 998 aa9.04□□□□□ -0.96
SOX6-211ENST00000528429 PPARAQ07869 468 aa9.04□□□□□ -0.96
SOX6-211ENST00000528429 DOK7Q18PE1 504 aa9.04□□□□□ -0.96
SOX6-211ENST00000528429 MFSD14BQ5SR56 506 aa9.04□□□□□ -0.96
SOX6-211ENST00000528429 AKNAD1Q5T1N1 836 aa9.04□□□□□ -0.96
SOX6-211ENST00000528429 CRNKL1Q9BZJ0 848 aaKnown RBP9.04□□□□□ -0.96
SOX6-211ENST00000528429 PDCL3Q9H2J4 239 aa9.04□□□□□ -0.96
SOX6-211ENST00000528429 DOCK2Q92608 1830 aa9.04□□□□□ -0.96
SOX6-211ENST00000528429 ZSCAN22P10073 491 aaPredicted RBP9.04□□□□□ -0.96
SOX6-211ENST00000528429 PDIA3P30101 505 aaKnown RBP9.04□□□□□ -0.96
SOX6-211ENST00000528429 NFXL1Q6ZNB6 911 aa9.04□□□□□ -0.96
SOX6-211ENST00000528429 C15orf52Q6ZUT6 534 aaKnown RBP9.04□□□□□ -0.96
SOX6-211ENST00000528429 FERMT3Q86UX7 667 aa9.04□□□□□ -0.96
SOX6-211ENST00000528429 CHMP4CQ96CF2 233 aa9.04□□□□□ -0.96
SOX6-211ENST00000528429 ZKSCAN3Q9BRR0 538 aa9.04□□□□□ -0.96
SOX6-211ENST00000528429 USP17L12C9JPN9 530 aa9.03□□□□□ -0.96
SOX6-211ENST00000528429 USP17L21D6R901 530 aa9.03□□□□□ -0.96
SOX6-211ENST00000528429 F8W031 263 aaPredicted RBP9.03□□□□□ -0.96
SOX6-211ENST00000528429 PFKFB2O60825 505 aa9.03□□□□□ -0.96
SOX6-211ENST00000528429 PRPF40AO75400 957 aaKnown RBP9.03□□□□□ -0.96
SOX6-211ENST00000528429 RXRAP19793 462 aa9.03□□□□□ -0.96
SOX6-211ENST00000528429 FAM184AQ8NB25 1140 aa9.03□□□□□ -0.96
SOX6-211ENST00000528429 NOL10Q9BSC4 688 aaKnown RBP9.03□□□□□ -0.96
SOX6-211ENST00000528429 AGXT2Q9BYV1 514 aa9.03□□□□□ -0.96
SOX6-211ENST00000528429 GDPD2Q9HCC8 539 aa9.03□□□□□ -0.96
SOX6-211ENST00000528429 TACC3Q9Y6A5 838 aa9.03□□□□□ -0.96
SOX6-211ENST00000528429 ZMYM6O95789 1325 aa9.03□□□□□ -0.96
SOX6-211ENST00000528429 ANKRD31Q8N7Z5 1873 aa9.03□□□□□ -0.96
SOX6-211ENST00000528429 IFIT3O14879 490 aaKnown RBP9.03□□□□□ -0.96
SOX6-211ENST00000528429 PRDM1O75626 825 aa9.03□□□□□ -0.96
SOX6-211ENST00000528429 PRR29P0C7W0 189 aa9.03□□□□□ -0.96
SOX6-211ENST00000528429 IL1R1P14778 569 aa9.03□□□□□ -0.96
SOX6-211ENST00000528429 TMEM67Q5HYA8 995 aa9.03□□□□□ -0.96
SOX6-211ENST00000528429 PPP4R3BQ5MIZ7 849 aa9.03□□□□□ -0.96
SOX6-211ENST00000528429 ZSWIM5Q9P217 1185 aa9.03□□□□□ -0.96
SOX6-211ENST00000528429 ANGEL1Q9UNK9 670 aaKnown RBP9.03□□□□□ -0.96
SOX6-211ENST00000528429 CACNA1SQ13698 1873 aa9.02□□□□□ -0.96
SOX6-211ENST00000528429 PTPDC1A2A3K4 754 aa9.02□□□□□ -0.97
SOX6-211ENST00000528429 USP5P45974 858 aa9.02□□□□□ -0.97
SOX6-211ENST00000528429 EVX2Q03828 476 aa9.02□□□□□ -0.97
SOX6-211ENST00000528429 CLEC17AQ6ZS10 378 aa9.02□□□□□ -0.97
SOX6-211ENST00000528429 MICU3Q86XE3 530 aa9.02□□□□□ -0.97
SOX6-211ENST00000528429 CCDC144CPQ8IYA2 1237 aa9.02□□□□□ -0.97
SOX6-211ENST00000528429 KRT23Q9C075 422 aa9.02□□□□□ -0.97
SOX6-211ENST00000528429 CNNM2Q9H8M5 875 aa9.02□□□□□ -0.97
SOX6-211ENST00000528429 SENP2Q9HC62 589 aa9.02□□□□□ -0.97
SOX6-211ENST00000528429 MTMR6Q9Y217 621 aa9.02□□□□□ -0.97
SOX6-211ENST00000528429 DDX49Q9Y6V7 483 aaKnown RBP9.02□□□□□ -0.97
SOX6-211ENST00000528429 CPLX1O14810 134 aa9.02□□□□□ -0.97
SOX6-211ENST00000528429 F13A1P00488 732 aa9.02□□□□□ -0.97
SOX6-211ENST00000528429 PDCP20941 246 aa9.02□□□□□ -0.97
SOX6-211ENST00000528429 GSTO1P78417 241 aa9.02□□□□□ -0.97
SOX6-211ENST00000528429 CDC37L1Q7L3B6 337 aa9.02□□□□□ -0.97
SOX6-211ENST00000528429 STAG1Q8WVM7 1258 aa9.02□□□□□ -0.97
SOX6-211ENST00000528429 ZNF274Q96GC6 653 aaPredicted RBP9.02□□□□□ -0.97
SOX6-211ENST00000528429 MYL10Q9BUA6 226 aa9.02□□□□□ -0.97
SOX6-211ENST00000528429 RNF41Q9H4P4 317 aaPredicted RBP9.02□□□□□ -0.97
SOX6-211ENST00000528429 DBNDD1Q9H9R9 158 aa9.02□□□□□ -0.97
SOX6-211ENST00000528429 DCP1AQ9NPI6 582 aaPredicted RBP9.02□□□□□ -0.97
SOX6-211ENST00000528429 MCM9Q9NXL9 1143 aa9.02□□□□□ -0.97
SOX6-211ENST00000528429 SALL1Q9NSC2 1324 aa9.02□□□□□ -0.97
SOX6-211ENST00000528429 LAMA4Q16363 1823 aa9.01□□□□□ -0.97
SOX6-211ENST00000528429 H3BQV1 296 aa9.01□□□□□ -0.97
SOX6-211ENST00000528429 SH2B2O14492 632 aaPredicted RBP9.01□□□□□ -0.97
SOX6-211ENST00000528429 RANBP6O60518 1105 aaKnown RBP9.01□□□□□ -0.97
SOX6-211ENST00000528429 BAG3O95817 575 aa9.01□□□□□ -0.97
SOX6-211ENST00000528429 CYP2D6P10635 497 aa9.01□□□□□ -0.97
SOX6-211ENST00000528429 IFFO2Q5TF58 517 aa9.01□□□□□ -0.97
SOX6-211ENST00000528429 CTR9Q6PD62 1173 aa9.01□□□□□ -0.97
SOX6-211ENST00000528429 NSUN7Q8NE18 718 aaKnown RBP9.01□□□□□ -0.97
SOX6-211ENST00000528429 SH3RF3Q8TEJ3 882 aaPredicted RBP9.01□□□□□ -0.97
SOX6-211ENST00000528429 MXD3Q9BW11 206 aa9.01□□□□□ -0.97
SOX6-211ENST00000528429 COA1Q9GZY4 146 aa9.01□□□□□ -0.97
SOX6-211ENST00000528429 MYH13Q9UKX3 1938 aa9.01□□□□□ -0.97
SOX6-211ENST00000528429 ZBTB7AO95365 584 aa9.01□□□□□ -0.97
SOX6-211ENST00000528429 CTDNEP1O95476 244 aa9.01□□□□□ -0.97
SOX6-211ENST00000528429 LDHCP07864 332 aa9.01□□□□□ -0.97
SOX6-211ENST00000528429 BTDP43251 543 aa9.01□□□□□ -0.97
SOX6-211ENST00000528429 SART3Q15020 963 aaKnown RBP9.01□□□□□ -0.97
SOX6-211ENST00000528429 STYK1Q6J9G0 422 aa9.01□□□□□ -0.97
SOX6-211ENST00000528429 CNKSR1Q969H4 720 aa9.01□□□□□ -0.97
SOX6-211ENST00000528429 UBAC1Q9BSL1 405 aa9.01□□□□□ -0.97
SOX6-211ENST00000528429 RGPD3A6NKT7 1758 aaPredicted RBP9□□□□□ -0.97
SOX6-211ENST00000528429 RGPD4Q7Z3J3 1758 aa9□□□□□ -0.97
SOX6-211ENST00000528429 ERICH2A1L162 156 aa9□□□□□ -0.97
SOX6-211ENST00000528429 CCDC69A6NI79 296 aa9□□□□□ -0.97
SOX6-211ENST00000528429 C21orf2O43822 256 aa9□□□□□ -0.97
SOX6-211ENST00000528429 USP17L8P0C7I0 530 aa9□□□□□ -0.97
SOX6-211ENST00000528429 GUCY1B3Q02153 619 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms