RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 HMG20BQ9P0W2 317 aa14.1□□□□□ -0.15
CCDC90B-210ENST00000528149 ZSWIM8A7E2V4 1837 aa14.1□□□□□ -0.15
CCDC90B-210ENST00000528149 MYO3BQ8WXR4 1341 aa14.1□□□□□ -0.15
CCDC90B-210ENST00000528149 ARID4AP29374 1257 aaPredicted RBP14.09□□□□□ -0.15
CCDC90B-210ENST00000528149 RBM5P52756 815 aaKnown RBP eCLIP14.09□□□□□ -0.15
CCDC90B-210ENST00000528149 FKBP1AP62942 108 aaKnown RBP14.09□□□□□ -0.15
CCDC90B-210ENST00000528149 CCDC158Q5M9N0 1113 aa14.09□□□□□ -0.15
CCDC90B-210ENST00000528149 PTPN18Q99952 460 aa14.09□□□□□ -0.15
CCDC90B-210ENST00000528149 GNL3LQ9NVN8 582 aaKnown RBP14.09□□□□□ -0.15
CCDC90B-210ENST00000528149 SALL3Q9BXA9 1300 aa14.09□□□□□ -0.15
CCDC90B-210ENST00000528149 SLURP2P0DP57 97 aa14.08□□□□□ -0.16
CCDC90B-210ENST00000528149 PDE4AP27815 886 aa14.08□□□□□ -0.16
CCDC90B-210ENST00000528149 GJA5P36382 358 aa14.08□□□□□ -0.16
CCDC90B-210ENST00000528149 DLGAP5Q15398 846 aa14.08□□□□□ -0.16
CCDC90B-210ENST00000528149 SKAP1Q86WV1 359 aa14.08□□□□□ -0.16
CCDC90B-210ENST00000528149 APOBEC3FQ8IUX4 373 aaKnown RBP14.08□□□□□ -0.16
CCDC90B-210ENST00000528149 COL25A1Q9BXS0 654 aaPredicted RBP14.08□□□□□ -0.16
CCDC90B-210ENST00000528149 UQCRFS1P1P0C7P4 283 aa14.07□□□□□ -0.16
CCDC90B-210ENST00000528149 MX1P20591 662 aa14.07□□□□□ -0.16
CCDC90B-210ENST00000528149 MAP3K11Q16584 847 aa14.07□□□□□ -0.16
CCDC90B-210ENST00000528149 OTUD7BQ6GQQ9 843 aa14.07□□□□□ -0.16
CCDC90B-210ENST00000528149 OGFOD1Q8N543 542 aa14.07□□□□□ -0.16
CCDC90B-210ENST00000528149 EDC3Q96F86 508 aaKnown RBP14.07□□□□□ -0.16
CCDC90B-210ENST00000528149 GPATCH3Q96I76 525 aa14.07□□□□□ -0.16
CCDC90B-210ENST00000528149 VEZTQ9HBM0 779 aa14.07□□□□□ -0.16
CCDC90B-210ENST00000528149 PIH1D3Q9NQM4 214 aaKnown RBP14.07□□□□□ -0.16
CCDC90B-210ENST00000528149 CDK5RAP2Q96SN8 1893 aa14.07□□□□□ -0.16
CCDC90B-210ENST00000528149 VCANP13611 3396 aa14.07□□□□□ -0.16
CCDC90B-210ENST00000528149 OTOFQ9HC10 1997 aa14.07□□□□□ -0.16
CCDC90B-210ENST00000528149 TCP10L2B9ZVM9 353 aa14.06□□□□□ -0.16
CCDC90B-210ENST00000528149 SEMA3EO15041 775 aa14.06□□□□□ -0.16
CCDC90B-210ENST00000528149 CHGBP05060 677 aa14.06□□□□□ -0.16
CCDC90B-210ENST00000528149 ZAP70P43403 619 aa14.06□□□□□ -0.16
CCDC90B-210ENST00000528149 SLFNL1Q499Z3 407 aa14.06□□□□□ -0.16
CCDC90B-210ENST00000528149 ANTXR1Q9H6X2 564 aa14.06□□□□□ -0.16
CCDC90B-210ENST00000528149 ECHDC1Q9NTX5 307 aa14.06□□□□□ -0.16
CCDC90B-210ENST00000528149 ZNF70Q9UC06 446 aaPredicted RBP14.06□□□□□ -0.16
CCDC90B-210ENST00000528149 DENND2AQ9ULE3 1009 aa14.06□□□□□ -0.16
CCDC90B-210ENST00000528149 DAGLAQ9Y4D2 1042 aa14.06□□□□□ -0.16
CCDC90B-210ENST00000528149 GTF3C3Q9Y5Q9 886 aa14.06□□□□□ -0.16
CCDC90B-210ENST00000528149 A0A1W2PPC1 479 aa14.05□□□□□ -0.16
CCDC90B-210ENST00000528149 PDE1AP54750 535 aa14.05□□□□□ -0.16
CCDC90B-210ENST00000528149 APOBEC3HQ6NTF7 200 aaKnown RBP14.05□□□□□ -0.16
CCDC90B-210ENST00000528149 SPATA5Q8NB90 893 aa14.05□□□□□ -0.16
CCDC90B-210ENST00000528149 MTMR14Q8NCE2 650 aa14.05□□□□□ -0.16
CCDC90B-210ENST00000528149 DNAJC2Q99543 621 aaKnown RBP14.05□□□□□ -0.16
CCDC90B-210ENST00000528149 BOLA2Q9H3K6 86 aa14.05□□□□□ -0.16
CCDC90B-210ENST00000528149 ABCF2Q9UG63 623 aa14.05□□□□□ -0.16
CCDC90B-210ENST00000528149 TESPA1A2RU30 521 aaPredicted RBP14.04□□□□□ -0.16
CCDC90B-210ENST00000528149 CYP2E1P05181 493 aaPredicted RBP14.04□□□□□ -0.16
CCDC90B-210ENST00000528149 ATP5JP18859 108 aa14.04□□□□□ -0.16
CCDC90B-210ENST00000528149 NFIAQ12857 509 aa14.04□□□□□ -0.16
CCDC90B-210ENST00000528149 MTFR1Q15390 333 aa14.04□□□□□ -0.16
CCDC90B-210ENST00000528149 SPDYE2Q495Y8 402 aa14.04□□□□□ -0.16
CCDC90B-210ENST00000528149 NBPF12Q5TAG4 269 aaPredicted RBP14.04□□□□□ -0.16
CCDC90B-210ENST00000528149 UBE2Q1Q7Z7E8 422 aa14.04□□□□□ -0.16
CCDC90B-210ENST00000528149 ADGRA1Q86SQ6 560 aa14.04□□□□□ -0.16
CCDC90B-210ENST00000528149 PLEKHM2Q8IWE5 1019 aa14.04□□□□□ -0.16
CCDC90B-210ENST00000528149 PI4K2BQ8TCG2 481 aa14.04□□□□□ -0.16
CCDC90B-210ENST00000528149 ZNF512BQ96KM6 892 aaPredicted RBP14.04□□□□□ -0.16
CCDC90B-210ENST00000528149 ARHGAP39Q9C0H5 1083 aa14.04□□□□□ -0.16
CCDC90B-210ENST00000528149 TMEM39BQ9GZU3 492 aa14.04□□□□□ -0.16
CCDC90B-210ENST00000528149 DEFB129Q9H1M3 183 aa14.04□□□□□ -0.16
CCDC90B-210ENST00000528149 PDS5AQ29RF7 1337 aaKnown RBP14.04□□□□□ -0.16
CCDC90B-210ENST00000528149 TTC41PQ6P2S7 1318 aa14.04□□□□□ -0.16
CCDC90B-210ENST00000528149 SPTBN5Q9NRC6 3674 aaKnown RBP14.03□□□□□ -0.16
CCDC90B-210ENST00000528149 MECOMQ03112 1051 aa14.03□□□□□ -0.16
CCDC90B-210ENST00000528149 ARHGEF6Q15052 776 aa14.03□□□□□ -0.16
CCDC90B-210ENST00000528149 ZFPM1Q8IX07 1006 aa14.03□□□□□ -0.16
CCDC90B-210ENST00000528149 WDR66Q8TBY9 1149 aa14.03□□□□□ -0.16
CCDC90B-210ENST00000528149 HTATIP2Q9BUP3 242 aa14.03□□□□□ -0.16
CCDC90B-210ENST00000528149 SERPINA10Q9UK55 444 aa14.03□□□□□ -0.16
CCDC90B-210ENST00000528149 SALL1Q9NSC2 1324 aa14.03□□□□□ -0.16
CCDC90B-210ENST00000528149 FOCADQ5VW36 1801 aa14.02□□□□□ -0.16
CCDC90B-210ENST00000528149 RFX7Q2KHR2 1363 aa14.02□□□□□ -0.17
CCDC90B-210ENST00000528149 GOLIM4O00461 696 aa14.02□□□□□ -0.17
CCDC90B-210ENST00000528149 ZBTB22O15209 634 aa14.02□□□□□ -0.17
CCDC90B-210ENST00000528149 PPP1R12BO60237 982 aaPredicted RBP14.02□□□□□ -0.17
CCDC90B-210ENST00000528149 MAP4K4O95819 1239 aaPredicted RBP14.02□□□□□ -0.17
CCDC90B-210ENST00000528149 LDHBP07195 334 aaKnown RBP14.02□□□□□ -0.17
CCDC90B-210ENST00000528149 RASA3Q14644 834 aa14.02□□□□□ -0.17
CCDC90B-210ENST00000528149 CDC42EP5Q6NZY7 148 aa14.02□□□□□ -0.17
CCDC90B-210ENST00000528149 Q7L0L9 218 aa14.02□□□□□ -0.17
CCDC90B-210ENST00000528149 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.02□□□□□ -0.17
CCDC90B-210ENST00000528149 TBC1D22AQ8WUA7 517 aa14.02□□□□□ -0.17
CCDC90B-210ENST00000528149 TEKT1Q969V4 418 aa14.02□□□□□ -0.17
CCDC90B-210ENST00000528149 ZDHHC15Q96MV8 337 aa14.02□□□□□ -0.17
CCDC90B-210ENST00000528149 HAUS7Q99871 368 aa14.02□□□□□ -0.17
CCDC90B-210ENST00000528149 STAP2Q9UGK3 403 aa14.02□□□□□ -0.17
CCDC90B-210ENST00000528149 NR2E3Q9Y5X4 410 aa14.02□□□□□ -0.17
CCDC90B-210ENST00000528149 ERC2O15083 957 aa14.01□□□□□ -0.17
CCDC90B-210ENST00000528149 GLRX3O76003 335 aaKnown RBP14.01□□□□□ -0.17
CCDC90B-210ENST00000528149 RGS3P49796 1198 aa14.01□□□□□ -0.17
CCDC90B-210ENST00000528149 TAF1CQ15572 869 aaPredicted RBP14.01□□□□□ -0.17
CCDC90B-210ENST00000528149 DEFB123Q8N688 67 aa14.01□□□□□ -0.17
CCDC90B-210ENST00000528149 TEPSINQ96N21 525 aa14.01□□□□□ -0.17
CCDC90B-210ENST00000528149 DDX4Q9NQI0 724 aaKnown RBP14.01□□□□□ -0.17
CCDC90B-210ENST00000528149 STXBP5LQ9Y2K9 1186 aa14.01□□□□□ -0.17
CCDC90B-210ENST00000528149 GAKO14976 1311 aa14□□□□□ -0.17
CCDC90B-210ENST00000528149 UNCXA6NJT0 531 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms