RNA–Protein interactions for RNA: ENST00000527900.1

CHD7-206, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-206ENST00000527900 MECOMQ03112 1051 aa10.52□□□□□ -0.73
CHD7-206ENST00000527900 SNAPC2Q13487 334 aa10.52□□□□□ -0.73
CHD7-206ENST00000527900 TAF1CQ15572 869 aaPredicted RBP10.52□□□□□ -0.73
CHD7-206ENST00000527900 SPTY2D1Q68D10 685 aaPredicted RBP10.52□□□□□ -0.73
CHD7-206ENST00000527900 PI16Q6UXB8 463 aa10.52□□□□□ -0.73
CHD7-206ENST00000527900 GPR108Q9NPR9 543 aa10.52□□□□□ -0.73
CHD7-206ENST00000527900 DDX4Q9NQI0 724 aaKnown RBP10.52□□□□□ -0.73
CHD7-206ENST00000527900 MROH7-TTC4A0A0A0MT08 1334 aa10.52□□□□□ -0.73
CHD7-206ENST00000527900 ZSWIM8A7E2V4 1837 aa10.51□□□□□ -0.73
CHD7-206ENST00000527900 PDE4DIPQ5VU43 2346 aa10.51□□□□□ -0.73
CHD7-206ENST00000527900 DDTLA6NHG4 134 aaPredicted RBP10.51□□□□□ -0.73
CHD7-206ENST00000527900 MCAMP43121 646 aa10.51□□□□□ -0.73
CHD7-206ENST00000527900 HNRNPUQ00839 825 aaKnown RBP eCLIP10.51□□□□□ -0.73
CHD7-206ENST00000527900 G3BP1Q13283 466 aaKnown RBP eCLIP10.51□□□□□ -0.738e-6■■□□□ 11.5
CHD7-206ENST00000527900 DIEXFQ68CQ4 756 aaKnown RBP10.51□□□□□ -0.73
CHD7-206ENST00000527900 C17orf99Q6UX52 265 aa10.51□□□□□ -0.73
CHD7-206ENST00000527900 SLF2Q8IX21 1173 aa10.51□□□□□ -0.73
CHD7-206ENST00000527900 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.51□□□□□ -0.73
CHD7-206ENST00000527900 SPATA5Q8NB90 893 aa10.51□□□□□ -0.73
CHD7-206ENST00000527900 ARMC5Q96C12 935 aa10.51□□□□□ -0.73
CHD7-206ENST00000527900 NSUN4Q96CB9 384 aaKnown RBP10.51□□□□□ -0.73
CHD7-206ENST00000527900 NEUROD6Q96NK8 337 aa10.51□□□□□ -0.73
CHD7-206ENST00000527900 EFCC1Q9HA90 598 aa10.51□□□□□ -0.73
CHD7-206ENST00000527900 ABCF2Q9UG63 623 aa10.51□□□□□ -0.73
CHD7-206ENST00000527900 NOP58Q9Y2X3 529 aaKnown RBP10.51□□□□□ -0.73
CHD7-206ENST00000527900 ADGRA2Q96PE1 1338 aa10.51□□□□□ -0.73
CHD7-206ENST00000527900 MYO5AQ9Y4I1 1855 aaKnown RBP10.51□□□□□ -0.73
CHD7-206ENST00000527900 PTPRFP10586 1907 aa10.5□□□□□ -0.73
CHD7-206ENST00000527900 SLURP2P0DP57 97 aa10.5□□□□□ -0.73
CHD7-206ENST00000527900 BTDP43251 543 aa10.5□□□□□ -0.73
CHD7-206ENST00000527900 GPAT2Q6NUI2 795 aa10.5□□□□□ -0.73
CHD7-206ENST00000527900 TBC1D9Q6ZT07 1266 aa10.5□□□□□ -0.73
CHD7-206ENST00000527900 ERICH6Q7L0X2 663 aa10.5□□□□□ -0.73
CHD7-206ENST00000527900 ANKRD23Q86SG2 305 aa10.5□□□□□ -0.73
CHD7-206ENST00000527900 DZIP1Q86YF9 867 aaKnown RBP10.5□□□□□ -0.73
CHD7-206ENST00000527900 POTEFA5A3E0 1075 aa10.49□□□□□ -0.73
CHD7-206ENST00000527900 CXCL11O14625 94 aa10.49□□□□□ -0.73
CHD7-206ENST00000527900 TBC1D12O60347 775 aa10.49□□□□□ -0.73
CHD7-206ENST00000527900 MAP4K4O95819 1239 aaPredicted RBP10.49□□□□□ -0.73
CHD7-206ENST00000527900 UQCRFS1P1P0C7P4 283 aa10.49□□□□□ -0.73
CHD7-206ENST00000527900 PTPRAP18433 802 aa10.49□□□□□ -0.73
CHD7-206ENST00000527900 CTGFP29279 349 aa10.49□□□□□ -0.73
CHD7-206ENST00000527900 LACTBP83111 547 aaPredicted RBP10.49□□□□□ -0.73
CHD7-206ENST00000527900 TNNI3KQ59H18 835 aa10.49□□□□□ -0.73
CHD7-206ENST00000527900 SCYL3Q8IZE3 742 aa10.49□□□□□ -0.73
CHD7-206ENST00000527900 ZNF512BQ96KM6 892 aaPredicted RBP10.49□□□□□ -0.73
CHD7-206ENST00000527900 ARHGAP39Q9C0H5 1083 aa10.49□□□□□ -0.73
CHD7-206ENST00000527900 AFG3L2Q9Y4W6 797 aa10.49□□□□□ -0.73
CHD7-206ENST00000527900 FPGT-TNNI3KV9GXZ4 949 aa10.49□□□□□ -0.73
CHD7-206ENST00000527900 KIAA0100Q14667 2235 aaKnown RBP10.49□□□□□ -0.73
CHD7-206ENST00000527900 CDK5RAP2Q96SN8 1893 aa10.49□□□□□ -0.73
CHD7-206ENST00000527900 PDHXO00330 501 aa10.48□□□□□ -0.73
CHD7-206ENST00000527900 ZNF333Q96JL9 665 aa10.48□□□□□ -0.73
CHD7-206ENST00000527900 DBNDD2Q9BQY9 259 aa10.48□□□□□ -0.73
CHD7-206ENST00000527900 ZBED9Q6R2W3 1325 aa10.48□□□□□ -0.73
CHD7-206ENST00000527900 DOCK1Q14185 1865 aa10.48□□□□□ -0.73
CHD7-206ENST00000527900 COL2A1P02458 1487 aaPredicted RBP10.48□□□□□ -0.73
CHD7-206ENST00000527900 SIPA1L1O43166 1804 aa10.47□□□□□ -0.73
CHD7-206ENST00000527900 FOCADQ5VW36 1801 aa10.47□□□□□ -0.73
CHD7-206ENST00000527900 A0A0G2JLL6 359 aaPredicted RBP10.47□□□□□ -0.73
CHD7-206ENST00000527900 CTNND1O60716 968 aaKnown RBP10.47□□□□□ -0.73
CHD7-206ENST00000527900 SURF6O75683 361 aaKnown RBP10.47□□□□□ -0.73
CHD7-206ENST00000527900 SLC34A2O95436 690 aa10.47□□□□□ -0.73
CHD7-206ENST00000527900 GNRH1P01148 92 aa10.47□□□□□ -0.73
CHD7-206ENST00000527900 CYP2E1P05181 493 aaPredicted RBP10.47□□□□□ -0.73
CHD7-206ENST00000527900 LDHCP07864 332 aa10.47□□□□□ -0.73
CHD7-206ENST00000527900 PPP4CP60510 307 aa10.47□□□□□ -0.73
CHD7-206ENST00000527900 GSTO1P78417 241 aa10.47□□□□□ -0.73
CHD7-206ENST00000527900 ARHGEF6Q15052 776 aa10.47□□□□□ -0.73
CHD7-206ENST00000527900 GORABQ5T7V8 394 aa10.47□□□□□ -0.73
CHD7-206ENST00000527900 PRRT2Q7Z6L0 340 aaPredicted RBP10.47□□□□□ -0.73
CHD7-206ENST00000527900 C1orf115Q9H7X2 142 aa10.47□□□□□ -0.73
CHD7-206ENST00000527900 PTCH2Q9Y6C5 1203 aa10.47□□□□□ -0.73
CHD7-206ENST00000527900 MGAMO43451 1857 aa10.47□□□□□ -0.73
CHD7-206ENST00000527900 IGSF3O75054 1194 aa10.46□□□□□ -0.73
CHD7-206ENST00000527900 BCRP11274 1271 aa10.46□□□□□ -0.73
CHD7-206ENST00000527900 PICALMQ13492 652 aa10.46□□□□□ -0.73
CHD7-206ENST00000527900 RRP1BQ14684 758 aaKnown RBP10.46□□□□□ -0.73
CHD7-206ENST00000527900 CEP85Q6P2H3 762 aa10.46□□□□□ -0.73
CHD7-206ENST00000527900 METTL16Q86W50 562 aaKnown RBP10.46□□□□□ -0.73
CHD7-206ENST00000527900 ZSCAN29Q8IWY8 852 aaPredicted RBP10.46□□□□□ -0.73
CHD7-206ENST00000527900 EAF2Q96CJ1 260 aaPredicted RBP10.46□□□□□ -0.73
CHD7-206ENST00000527900 OSBPL5Q9H0X9 879 aaPredicted RBP10.46□□□□□ -0.73
CHD7-206ENST00000527900 SNRKQ9NRH2 765 aa10.46□□□□□ -0.73
CHD7-206ENST00000527900 CPA4Q9UI42 421 aa10.46□□□□□ -0.73
CHD7-206ENST00000527900 DBNLQ9UJU6 430 aaKnown RBP10.46□□□□□ -0.73
CHD7-206ENST00000527900 SLC45A1Q9Y2W3 748 aa10.46□□□□□ -0.73
CHD7-206ENST00000527900 ZHX2Q9Y6X8 837 aa10.46□□□□□ -0.73
CHD7-206ENST00000527900 ATAD5Q96QE3 1844 aa10.45□□□□□ -0.74
CHD7-206ENST00000527900 MAST2Q6P0Q8 1798 aa10.45□□□□□ -0.74
CHD7-206ENST00000527900 EN2P19622 333 aaPredicted RBP10.45□□□□□ -0.74
CHD7-206ENST00000527900 PRMT2P55345 433 aa10.45□□□□□ -0.74
CHD7-206ENST00000527900 CCDC158Q5M9N0 1113 aa10.45□□□□□ -0.74
CHD7-206ENST00000527900 PRPF38BQ5VTL8 546 aaKnown RBP10.45□□□□□ -0.74
CHD7-206ENST00000527900 FASTKD5Q7L8L6 764 aaKnown RBP10.45□□□□□ -0.74
CHD7-206ENST00000527900 ADGRA1Q86SQ6 560 aa10.45□□□□□ -0.74
CHD7-206ENST00000527900 ITPRIPQ8IWB1 547 aa10.45□□□□□ -0.74
CHD7-206ENST00000527900 FTSJ3Q8IY81 847 aaKnown RBP10.45□□□□□ -0.74
CHD7-206ENST00000527900 SH3RF3Q8TEJ3 882 aaPredicted RBP10.45□□□□□ -0.74
CHD7-206ENST00000527900 TRIM47Q96LD4 638 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms