RNA–Protein interactions for RNA: ENST00000527464.5

NR1H3-229, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best)

Gene NR1H3, Length 1,183 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-229ENST00000527464 DDX4Q9NQI0 724 aaKnown RBP20.54■□□□□ 0.88
NR1H3-229ENST00000527464 ZNF112Q9UJU3 913 aa20.54■□□□□ 0.88
NR1H3-229ENST00000527464 DOCK2Q92608 1830 aa20.54■□□□□ 0.88
NR1H3-229ENST00000527464 COL2A1P02458 1487 aaPredicted RBP20.54■□□□□ 0.88
NR1H3-229ENST00000527464 CYP7A1P22680 504 aa20.53■□□□□ 0.88
NR1H3-229ENST00000527464 MKRN3Q13064 507 aaKnown RBP20.53■□□□□ 0.88
NR1H3-229ENST00000527464 MIGA2Q7L4E1 593 aa20.53■□□□□ 0.88
NR1H3-229ENST00000527464 TEX11Q8IYF3 940 aa20.53■□□□□ 0.88
NR1H3-229ENST00000527464 ELP3Q9H9T3 547 aa20.53■□□□□ 0.88
NR1H3-229ENST00000527464 ATRNL1Q5VV63 1379 aa20.53■□□□□ 0.88
NR1H3-229ENST00000527464 TRPA1O75762 1119 aa20.52■□□□□ 0.88
NR1H3-229ENST00000527464 MAP3K10Q02779 954 aa20.52■□□□□ 0.88
NR1H3-229ENST00000527464 PICALMQ13492 652 aa20.52■□□□□ 0.88
NR1H3-229ENST00000527464 ZSCAN29Q8IWY8 852 aaPredicted RBP20.52■□□□□ 0.88
NR1H3-229ENST00000527464 OPTNQ96CV9 577 aa20.52■□□□□ 0.88
NR1H3-229ENST00000527464 ANTXR1Q9H6X2 564 aa20.52■□□□□ 0.88
NR1H3-229ENST00000527464 AATFQ9NY61 560 aaKnown RBP eCLIP20.52■□□□□ 0.88
NR1H3-229ENST00000527464 NDUFB9Q9Y6M9 179 aa20.52■□□□□ 0.88
NR1H3-229ENST00000527464 SPDYE5A6NIY4 337 aa20.51■□□□□ 0.87
NR1H3-229ENST00000527464 ALDH1A1P00352 501 aa20.51■□□□□ 0.87
NR1H3-229ENST00000527464 SH3BP5LQ7L8J4 393 aa20.51■□□□□ 0.87
NR1H3-229ENST00000527464 ADGRA1Q86SQ6 560 aa20.51■□□□□ 0.87
NR1H3-229ENST00000527464 ERO1BQ86YB8 467 aa20.51■□□□□ 0.87
NR1H3-229ENST00000527464 SH3RF3Q8TEJ3 882 aaPredicted RBP20.51■□□□□ 0.87
NR1H3-229ENST00000527464 TSKSQ9UJT2 592 aa20.51■□□□□ 0.87
NR1H3-229ENST00000527464 SNCAIPQ9Y6H5 919 aa20.51■□□□□ 0.87
NR1H3-229ENST00000527464 DDTLA6NHG4 134 aaPredicted RBP20.5■□□□□ 0.87
NR1H3-229ENST00000527464 SMARCA5O60264 1052 aaPredicted RBP20.5■□□□□ 0.87
NR1H3-229ENST00000527464 GJA5P36382 358 aa20.5■□□□□ 0.87
NR1H3-229ENST00000527464 MAGEB6Q8N7X4 407 aa20.5■□□□□ 0.87
NR1H3-229ENST00000527464 DNAJC2Q99543 621 aaKnown RBP20.5■□□□□ 0.87
NR1H3-229ENST00000527464 HAUS7Q99871 368 aa20.5■□□□□ 0.87
NR1H3-229ENST00000527464 CFHR5Q9BXR6 569 aa20.5■□□□□ 0.87
NR1H3-229ENST00000527464 OSBPL5Q9H0X9 879 aaPredicted RBP20.5■□□□□ 0.87
NR1H3-229ENST00000527464 BCL11AQ9H165 835 aa20.5■□□□□ 0.87
NR1H3-229ENST00000527464 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.5■□□□□ 0.87
NR1H3-229ENST00000527464 CASP8AP2Q9UKL3 1982 aa20.49■□□□□ 0.87
NR1H3-229ENST00000527464 TESPA1A2RU30 521 aaPredicted RBP20.49■□□□□ 0.87
NR1H3-229ENST00000527464 GOLIM4O00461 696 aa20.49■□□□□ 0.87
NR1H3-229ENST00000527464 TBC1D12O60347 775 aa20.49■□□□□ 0.87
NR1H3-229ENST00000527464 HDAC1Q13547 482 aaPredicted RBP20.49■□□□□ 0.87
NR1H3-229ENST00000527464 NOL9Q5SY16 702 aaKnown RBP20.49■□□□□ 0.87
NR1H3-229ENST00000527464 ZKSCAN4Q969J2 545 aaPredicted RBP20.49■□□□□ 0.87
NR1H3-229ENST00000527464 GPATCH3Q96I76 525 aa20.49■□□□□ 0.87
NR1H3-229ENST00000527464 DHX36Q9H2U1 1008 aaKnown RBP20.49■□□□□ 0.87
NR1H3-229ENST00000527464 BOLA2Q9H3K6 86 aa20.49■□□□□ 0.87
NR1H3-229ENST00000527464 ECHDC1Q9NTX5 307 aa20.49■□□□□ 0.87
NR1H3-229ENST00000527464 PAG1Q9NWQ8 432 aa20.49■□□□□ 0.87
NR1H3-229ENST00000527464 INPP5BP32019 993 aa20.48■□□□□ 0.87
NR1H3-229ENST00000527464 GTF2A2P52657 109 aa20.48■□□□□ 0.87
NR1H3-229ENST00000527464 OTUD7BQ6GQQ9 843 aa20.48■□□□□ 0.87
NR1H3-229ENST00000527464 IFNL1Q8IU54 200 aa20.48■□□□□ 0.87
NR1H3-229ENST00000527464 TNS4Q8IZW8 715 aa20.48■□□□□ 0.87
NR1H3-229ENST00000527464 FOCADQ5VW36 1801 aa20.48■□□□□ 0.87
NR1H3-229ENST00000527464 CDK5RAP2Q96SN8 1893 aa20.47■□□□□ 0.87
NR1H3-229ENST00000527464 PHF20L1A8MW92 1017 aa20.47■□□□□ 0.87
NR1H3-229ENST00000527464 PPATQ06203 517 aa20.47■□□□□ 0.87
NR1H3-229ENST00000527464 PPIL2Q13356 520 aa20.47■□□□□ 0.87
NR1H3-229ENST00000527464 NOM1Q5C9Z4 860 aaKnown RBP20.47■□□□□ 0.87
NR1H3-229ENST00000527464 SLC9C2Q5TAH2 1124 aa20.47■□□□□ 0.87
NR1H3-229ENST00000527464 GCC1Q96CN9 775 aa20.47■□□□□ 0.87
NR1H3-229ENST00000527464 OTUD5Q96G74 571 aa20.47■□□□□ 0.87
NR1H3-229ENST00000527464 MS4A4AQ96JQ5 239 aa20.47■□□□□ 0.87
NR1H3-229ENST00000527464 PDE6AP16499 860 aa20.46■□□□□ 0.87
NR1H3-229ENST00000527464 TGFBRAP1Q8WUH2 860 aa20.46■□□□□ 0.87
NR1H3-229ENST00000527464 CNKSR2Q8WXI2 1034 aa20.46■□□□□ 0.87
NR1H3-229ENST00000527464 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.46■□□□□ 0.87
NR1H3-229ENST00000527464 PI4KBQ9UBF8 816 aa20.46■□□□□ 0.87
NR1H3-229ENST00000527464 CTNND1O60716 968 aaKnown RBP20.45■□□□□ 0.86
NR1H3-229ENST00000527464 DYNLL1P63167 89 aaKnown RBP20.45■□□□□ 0.86
NR1H3-229ENST00000527464 MIGA1Q8NAN2 632 aa20.45■□□□□ 0.86
NR1H3-229ENST00000527464 HERC5Q9UII4 1024 aaKnown RBP20.45■□□□□ 0.86
NR1H3-229ENST00000527464 SUPT16HQ9Y5B9 1047 aaKnown RBP20.45■□□□□ 0.86
NR1H3-229ENST00000527464 FLT1P17948 1338 aa20.45■□□□□ 0.86
NR1H3-229ENST00000527464 CETPP11597 493 aa20.44■□□□□ 0.86
NR1H3-229ENST00000527464 SNAPC2Q13487 334 aa20.44■□□□□ 0.86
NR1H3-229ENST00000527464 MAPKAPK5Q8IW41 473 aa20.44■□□□□ 0.86
NR1H3-229ENST00000527464 SCYL3Q8IZE3 742 aa20.44■□□□□ 0.86
NR1H3-229ENST00000527464 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.44■□□□□ 0.86
NR1H3-229ENST00000527464 ZBTB47Q9UFB7 747 aaPredicted RBP20.44■□□□□ 0.86
NR1H3-229ENST00000527464 TTC41PQ6P2S7 1318 aa20.44■□□□□ 0.86
NR1H3-229ENST00000527464 MAGEB6P1A0A0J9YX57 407 aa20.43■□□□□ 0.86
NR1H3-229ENST00000527464 TCRBV5S4A2TA0A5A2 114 aa20.43■□□□□ 0.86
NR1H3-229ENST00000527464 IGF2BP3O00425 579 aaKnown RBP eCLIP20.43■□□□□ 0.86
NR1H3-229ENST00000527464 IRF6O14896 467 aa20.43■□□□□ 0.86
NR1H3-229ENST00000527464 ZSCAN25Q6NSZ9 544 aa20.43■□□□□ 0.86
NR1H3-229ENST00000527464 FOXP4Q8IVH2 680 aaPredicted RBP20.43■□□□□ 0.86
NR1H3-229ENST00000527464 EDC3Q96F86 508 aaKnown RBP20.43■□□□□ 0.86
NR1H3-229ENST00000527464 RIOK1Q9BRS2 568 aaKnown RBP20.43■□□□□ 0.86
NR1H3-229ENST00000527464 PICK1Q9NRD5 415 aa20.43■□□□□ 0.86
NR1H3-229ENST00000527464 ZNF532Q9HCE3 1301 aa20.43■□□□□ 0.86
NR1H3-229ENST00000527464 MYH7P12883 1935 aa20.43■□□□□ 0.86
NR1H3-229ENST00000527464 CCL15-CCL14A0A0B4J2E2 113 aa20.42■□□□□ 0.86
NR1H3-229ENST00000527464 TBC1D8O95759 1140 aa20.42■□□□□ 0.86
NR1H3-229ENST00000527464 ADD2P35612 726 aa20.42■□□□□ 0.86
NR1H3-229ENST00000527464 USP5P45974 858 aa20.42■□□□□ 0.86
NR1H3-229ENST00000527464 CCL15Q16663 113 aa20.42■□□□□ 0.86
NR1H3-229ENST00000527464 METTL16Q86W50 562 aaKnown RBP20.42■□□□□ 0.86
NR1H3-229ENST00000527464 BRI3BPQ8WY22 251 aa20.42■□□□□ 0.86
NR1H3-229ENST00000527464 PTPN18Q99952 460 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms