RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 CASP7P55210 303 aa14.4□□□□□ -0.1
CAPN1-208ENST00000527323 TMCO3Q6UWJ1 677 aa14.4□□□□□ -0.1
CAPN1-208ENST00000527323 GIGYF2Q6Y7W6 1299 aaKnown RBP14.4□□□□□ -0.1
CAPN1-208ENST00000527323 NCOA7Q8NI08 942 aa14.4□□□□□ -0.1
CAPN1-208ENST00000527323 ZNF213O14771 459 aa14.4□□□□□ -0.1
CAPN1-208ENST00000527323 WDHD1O75717 1129 aaPredicted RBP14.4□□□□□ -0.1
CAPN1-208ENST00000527323 H2AFXP16104 143 aaPredicted RBP14.4□□□□□ -0.1
CAPN1-208ENST00000527323 TAF7LQ5H9L4 462 aa14.4□□□□□ -0.1
CAPN1-208ENST00000527323 OLFM4Q6UX06 510 aa14.4□□□□□ -0.1
CAPN1-208ENST00000527323 C3orf67Q6ZVT6 689 aa14.4□□□□□ -0.1
CAPN1-208ENST00000527323 RGS17Q9UGC6 210 aaPredicted RBP14.4□□□□□ -0.1
CAPN1-208ENST00000527323 H7C1W4 665 aa14.39□□□□□ -0.11
CAPN1-208ENST00000527323 TOP1P11387 765 aaKnown RBP14.39□□□□□ -0.11
CAPN1-208ENST00000527323 EIF5P55010 431 aaKnown RBP14.39□□□□□ -0.11
CAPN1-208ENST00000527323 KIF23Q02241 960 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-208ENST00000527323 CCDC93Q567U6 631 aa14.39□□□□□ -0.11
CAPN1-208ENST00000527323 HSP90AA4PQ58FG1 418 aa14.39□□□□□ -0.11
CAPN1-208ENST00000527323 AXDND1Q5T1B0 1012 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-208ENST00000527323 PDILTQ8N807 584 aa14.39□□□□□ -0.11
CAPN1-208ENST00000527323 DPF2Q92785 391 aa14.39□□□□□ -0.11
CAPN1-208ENST00000527323 AIFM3Q96NN9 605 aa14.39□□□□□ -0.11
CAPN1-208ENST00000527323 GPR108Q9NPR9 543 aa14.39□□□□□ -0.11
CAPN1-208ENST00000527323 IRS4O14654 1257 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-208ENST00000527323 TRDNQ13061 729 aa14.39□□□□□ -0.11
CAPN1-208ENST00000527323 IKBKBO14920 756 aa14.38□□□□□ -0.11
CAPN1-208ENST00000527323 MYL5Q02045 173 aa14.38□□□□□ -0.11
CAPN1-208ENST00000527323 PNOCQ13519 176 aa14.38□□□□□ -0.11
CAPN1-208ENST00000527323 ALG1Q9BT22 464 aa14.38□□□□□ -0.11
CAPN1-208ENST00000527323 CARD6Q9BX69 1037 aa14.38□□□□□ -0.11
CAPN1-208ENST00000527323 TEX13AQ9BXU3 409 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-208ENST00000527323 TMX1Q9H3N1 280 aa14.38□□□□□ -0.11
CAPN1-208ENST00000527323 FAM53CQ9NYF3 392 aa14.38□□□□□ -0.11
CAPN1-208ENST00000527323 HPS5Q9UPZ3 1129 aa14.38□□□□□ -0.11
CAPN1-208ENST00000527323 POLR3GO15318 223 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-208ENST00000527323 APBA3O96018 575 aa14.38□□□□□ -0.11
CAPN1-208ENST00000527323 RXRAP19793 462 aa14.38□□□□□ -0.11
CAPN1-208ENST00000527323 SLC39A14Q15043 492 aa14.38□□□□□ -0.11
CAPN1-208ENST00000527323 TBC1D9BQ66K14 1250 aa14.38□□□□□ -0.11
CAPN1-208ENST00000527323 MSL1Q68DK7 614 aa14.38□□□□□ -0.11
CAPN1-208ENST00000527323 JMYQ8N9B5 988 aa14.38□□□□□ -0.11
CAPN1-208ENST00000527323 KCNJ6P48051 423 aa14.38□□□□□ -0.11
CAPN1-208ENST00000527323 EVCP57679 992 aa14.38□□□□□ -0.11
CAPN1-208ENST00000527323 APPP05067 770 aa14.37□□□□□ -0.11
CAPN1-208ENST00000527323 PNMA6AP0CW24 399 aaPredicted RBP14.37□□□□□ -0.11
CAPN1-208ENST00000527323 IQSEC3Q9UPP2 1182 aaPredicted RBP14.37□□□□□ -0.11
CAPN1-208ENST00000527323 FHOD1Q9Y613 1164 aa14.37□□□□□ -0.11
CAPN1-208ENST00000527323 ADORA1P30542 326 aa14.37□□□□□ -0.11
CAPN1-208ENST00000527323 CCDC57Q2TAC2 916 aa14.37□□□□□ -0.11
CAPN1-208ENST00000527323 PI16Q6UXB8 463 aa14.37□□□□□ -0.11
CAPN1-208ENST00000527323 ARHGEF1Q92888 912 aaKnown RBP14.37□□□□□ -0.11
CAPN1-208ENST00000527323 CLIC6Q96NY7 704 aa14.37□□□□□ -0.11
CAPN1-208ENST00000527323 FANCLQ9NW38 375 aa14.37□□□□□ -0.11
CAPN1-208ENST00000527323 NEDD4P46934 1319 aa14.36□□□□□ -0.11
CAPN1-208ENST00000527323 ZSCAN12O43309 604 aa14.36□□□□□ -0.11
CAPN1-208ENST00000527323 CDK11BP21127 795 aaKnown RBP14.36□□□□□ -0.11
CAPN1-208ENST00000527323 IL6STP40189 918 aaPredicted RBP14.36□□□□□ -0.11
CAPN1-208ENST00000527323 PDE4CQ08493 712 aa14.36□□□□□ -0.11
CAPN1-208ENST00000527323 CPLX2Q6PUV4 134 aaKnown RBP14.36□□□□□ -0.11
CAPN1-208ENST00000527323 MB21D2Q8IYB1 491 aaPredicted RBP14.36□□□□□ -0.11
CAPN1-208ENST00000527323 CNNM3Q8NE01 707 aa14.36□□□□□ -0.11
CAPN1-208ENST00000527323 ISCA1Q9BUE6 129 aa14.36□□□□□ -0.11
CAPN1-208ENST00000527323 MROH7-TTC4A0A0A0MT08 1334 aa14.36□□□□□ -0.11
CAPN1-208ENST00000527323 TMEM232C9JQI7 657 aa14.36□□□□□ -0.11
CAPN1-208ENST00000527323 CAMTA2O94983 1202 aa14.36□□□□□ -0.11
CAPN1-208ENST00000527323 ZFYP08048 801 aaPredicted RBP14.36□□□□□ -0.11
CAPN1-208ENST00000527323 VPS37DQ86XT2 251 aa14.36□□□□□ -0.11
CAPN1-208ENST00000527323 PROM2Q8N271 834 aa14.36□□□□□ -0.11
CAPN1-208ENST00000527323 CCDC191Q8NCU4 936 aa14.36□□□□□ -0.11
CAPN1-208ENST00000527323 TIGD1Q96MW7 591 aa14.36□□□□□ -0.11
CAPN1-208ENST00000527323 PUS7LQ9H0K6 701 aaKnown RBP14.36□□□□□ -0.11
CAPN1-208ENST00000527323 PHLPP2Q6ZVD8 1323 aa14.36□□□□□ -0.11
CAPN1-208ENST00000527323 METAP2P50579 478 aaKnown RBP eCLIP14.35□□□□□ -0.113e-8■■■■□ 23.9
CAPN1-208ENST00000527323 ANTXR2P58335 489 aa14.35□□□□□ -0.11
CAPN1-208ENST00000527323 TRIM29Q14134 588 aa14.35□□□□□ -0.11
CAPN1-208ENST00000527323 CCDC102BQ68D86 513 aa14.35□□□□□ -0.11
CAPN1-208ENST00000527323 KRT40Q6A162 431 aa14.35□□□□□ -0.11
CAPN1-208ENST00000527323 FBXL16Q8N461 479 aa14.35□□□□□ -0.11
CAPN1-208ENST00000527323 XAGE2Q96GT9 111 aa14.35□□□□□ -0.11
CAPN1-208ENST00000527323 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.35□□□□□ -0.11
CAPN1-208ENST00000527323 ITGA6P23229 1130 aa14.35□□□□□ -0.11
CAPN1-208ENST00000527323 RXRBP28702 533 aa14.35□□□□□ -0.11
CAPN1-208ENST00000527323 ZAP70P43403 619 aa14.35□□□□□ -0.11
CAPN1-208ENST00000527323 GNG11P61952 73 aa14.35□□□□□ -0.11
CAPN1-208ENST00000527323 ERFEQ4G0M1 354 aa14.35□□□□□ -0.11
CAPN1-208ENST00000527323 TEX35Q5T0J7 233 aa14.35□□□□□ -0.11
CAPN1-208ENST00000527323 NFXL1Q6ZNB6 911 aa14.35□□□□□ -0.11
CAPN1-208ENST00000527323 PHKBQ93100 1093 aa14.35□□□□□ -0.11
CAPN1-208ENST00000527323 SRRTQ9BXP5 876 aaKnown RBP14.35□□□□□ -0.11
CAPN1-208ENST00000527323 SEC31AO94979 1220 aaKnown RBP14.35□□□□□ -0.11
CAPN1-208ENST00000527323 TRIM65Q6PJ69 517 aa14.35□□□□□ -0.11
CAPN1-208ENST00000527323 SHC4Q6S5L8 630 aa14.35□□□□□ -0.11
CAPN1-208ENST00000527323 TICAM2Q86XR7 235 aa14.35□□□□□ -0.11
CAPN1-208ENST00000527323 AK7Q96M32 723 aa14.35□□□□□ -0.11
CAPN1-208ENST00000527323 EPC1Q9H2F5 836 aa14.35□□□□□ -0.11
CAPN1-208ENST00000527323 CALCOCO1Q9P1Z2 691 aa14.35□□□□□ -0.11
CAPN1-208ENST00000527323 GPAA1O43292 621 aa14.34□□□□□ -0.11
CAPN1-208ENST00000527323 CASQ1P31415 396 aa14.34□□□□□ -0.11
CAPN1-208ENST00000527323 PLA2G4AP47712 749 aa14.34□□□□□ -0.11
CAPN1-208ENST00000527323 SPECC1Q5M775 1068 aa14.34□□□□□ -0.11
CAPN1-208ENST00000527323 MICU3Q86XE3 530 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms