RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 ZAP70P43403 619 aa15.28■□□□□ 0.04
SSSCA1-203ENST00000526877 DIXDC1Q155Q3 683 aa15.28■□□□□ 0.04
SSSCA1-203ENST00000526877 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.28■□□□□ 0.04
SSSCA1-203ENST00000526877 FAM83AQ86UY5 434 aa15.28■□□□□ 0.04
SSSCA1-203ENST00000526877 ANKRD13AQ8IZ07 590 aa15.28■□□□□ 0.04
SSSCA1-203ENST00000526877 KBTBD3Q8NAB2 608 aa15.28■□□□□ 0.04
SSSCA1-203ENST00000526877 SPATA5Q8NB90 893 aa15.28■□□□□ 0.04
SSSCA1-203ENST00000526877 RUFY2Q8WXA3 655 aa15.28■□□□□ 0.04
SSSCA1-203ENST00000526877 WNK4Q96J92 1243 aa15.28■□□□□ 0.04
SSSCA1-203ENST00000526877 UPF2Q9HAU5 1272 aaKnown RBP15.28■□□□□ 0.04
SSSCA1-203ENST00000526877 DIAPH3Q9NSV4 1193 aa15.28■□□□□ 0.04
SSSCA1-203ENST00000526877 MYH7P12883 1935 aa15.27■□□□□ 0.04
SSSCA1-203ENST00000526877 RFX7Q2KHR2 1363 aa15.27■□□□□ 0.04
SSSCA1-203ENST00000526877 TBC1D8O95759 1140 aa15.27■□□□□ 0.04
SSSCA1-203ENST00000526877 LDHBP07195 334 aaKnown RBP15.27■□□□□ 0.04
SSSCA1-203ENST00000526877 ZBTB48P10074 688 aaPredicted RBP15.27■□□□□ 0.04
SSSCA1-203ENST00000526877 CDC42EP5Q6NZY7 148 aa15.27■□□□□ 0.04
SSSCA1-203ENST00000526877 EDC3Q96F86 508 aaKnown RBP15.27■□□□□ 0.04
SSSCA1-203ENST00000526877 MCOLN1Q9GZU1 580 aa15.27■□□□□ 0.04
SSSCA1-203ENST00000526877 HMG20BQ9P0W2 317 aa15.27■□□□□ 0.04
SSSCA1-203ENST00000526877 NDUFB9Q9Y6M9 179 aa15.27■□□□□ 0.04
SSSCA1-203ENST00000526877 MYH2Q9UKX2 1941 aa15.27■□□□□ 0.03
SSSCA1-203ENST00000526877 INHBEP58166 350 aa15.26■□□□□ 0.03
SSSCA1-203ENST00000526877 SREBF2Q12772 1141 aa15.26■□□□□ 0.03
SSSCA1-203ENST00000526877 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.26■□□□□ 0.03
SSSCA1-203ENST00000526877 CFHR5Q9BXR6 569 aa15.26■□□□□ 0.03
SSSCA1-203ENST00000526877 TMOD2Q9NZR1 351 aa15.26■□□□□ 0.03
SSSCA1-203ENST00000526877 MANSC4A6NHS7 340 aaPredicted RBP15.25■□□□□ 0.03
SSSCA1-203ENST00000526877 MAP3K9P80192 1104 aa15.25■□□□□ 0.03
SSSCA1-203ENST00000526877 DGKZQ13574 1117 aa15.25■□□□□ 0.03
SSSCA1-203ENST00000526877 ZSCAN25Q6NSZ9 544 aa15.25■□□□□ 0.03
SSSCA1-203ENST00000526877 FAM151AQ8WW52 585 aa15.25■□□□□ 0.03
SSSCA1-203ENST00000526877 FAM163AQ96GL9 167 aaPredicted RBP15.25■□□□□ 0.03
SSSCA1-203ENST00000526877 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.25■□□□□ 0.03
SSSCA1-203ENST00000526877 R3HDMLQ9H3Y0 253 aa15.25■□□□□ 0.03
SSSCA1-203ENST00000526877 TSHZ2Q9NRE2 1034 aa15.25■□□□□ 0.03
SSSCA1-203ENST00000526877 GAKO14976 1311 aa15.24■□□□□ 0.03
SSSCA1-203ENST00000526877 TESPA1A2RU30 521 aaPredicted RBP15.24■□□□□ 0.03
SSSCA1-203ENST00000526877 REC8O95072 547 aa15.24■□□□□ 0.03
SSSCA1-203ENST00000526877 SEC24BO95487 1268 aa15.24■□□□□ 0.03
SSSCA1-203ENST00000526877 CYP2E1P05181 493 aaPredicted RBP15.24■□□□□ 0.03
SSSCA1-203ENST00000526877 ZFYP08048 801 aaPredicted RBP15.24■□□□□ 0.03
SSSCA1-203ENST00000526877 MFAP1P55081 439 aaKnown RBP15.24■□□□□ 0.03
SSSCA1-203ENST00000526877 NFIAQ12857 509 aa15.24■□□□□ 0.03
SSSCA1-203ENST00000526877 NOM1Q5C9Z4 860 aaKnown RBP15.24■□□□□ 0.03
SSSCA1-203ENST00000526877 PI16Q6UXB8 463 aa15.24■□□□□ 0.03
SSSCA1-203ENST00000526877 IFNL1Q8IU54 200 aa15.24■□□□□ 0.03
SSSCA1-203ENST00000526877 ZGPATQ8N5A5 531 aaKnown RBP15.24■□□□□ 0.03
SSSCA1-203ENST00000526877 ZNF384Q8TF68 577 aa15.24■□□□□ 0.03
SSSCA1-203ENST00000526877 ESYT1Q9BSJ8 1104 aa15.24■□□□□ 0.03
SSSCA1-203ENST00000526877 ANTXR1Q9H6X2 564 aa15.24■□□□□ 0.03
SSSCA1-203ENST00000526877 ELP3Q9H9T3 547 aa15.24■□□□□ 0.03
SSSCA1-203ENST00000526877 USP40Q9NVE5 1235 aa15.24■□□□□ 0.03
SSSCA1-203ENST00000526877 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.24■□□□□ 0.03
SSSCA1-203ENST00000526877 FAM198AQ9UFP1 575 aa15.24■□□□□ 0.03
SSSCA1-203ENST00000526877 MYO5AQ9Y4I1 1855 aaKnown RBP15.24■□□□□ 0.03
SSSCA1-203ENST00000526877 RPAP1Q9BWH6 1393 aaPredicted RBP15.24■□□□□ 0.03
SSSCA1-203ENST00000526877 DOCK2Q92608 1830 aa15.23■□□□□ 0.03
SSSCA1-203ENST00000526877 IGF2BP3O00425 579 aaKnown RBP eCLIP15.23■□□□□ 0.03
SSSCA1-203ENST00000526877 VGLL4Q14135 290 aa15.23■□□□□ 0.03
SSSCA1-203ENST00000526877 CWC27Q6UX04 472 aaKnown RBP15.23■□□□□ 0.03
SSSCA1-203ENST00000526877 ZFPM1Q8IX07 1006 aa15.23■□□□□ 0.03
SSSCA1-203ENST00000526877 ZNF296Q8WUU4 475 aaPredicted RBP15.23■□□□□ 0.03
SSSCA1-203ENST00000526877 CNKSR2Q8WXI2 1034 aa15.23■□□□□ 0.03
SSSCA1-203ENST00000526877 MS4A4AQ96JQ5 239 aa15.23■□□□□ 0.03
SSSCA1-203ENST00000526877 PTPN18Q99952 460 aa15.23■□□□□ 0.03
SSSCA1-203ENST00000526877 ABCF2Q9UG63 623 aa15.23■□□□□ 0.03
SSSCA1-203ENST00000526877 GPR25O00155 361 aa15.22■□□□□ 0.03
SSSCA1-203ENST00000526877 RNF113AO15541 343 aaKnown RBP15.22■□□□□ 0.03
SSSCA1-203ENST00000526877 ALDH1A1P00352 501 aa15.22■□□□□ 0.03
SSSCA1-203ENST00000526877 MAP3K12Q12852 859 aa15.22■□□□□ 0.03
SSSCA1-203ENST00000526877 NMIQ13287 307 aaPredicted RBP15.22■□□□□ 0.03
SSSCA1-203ENST00000526877 SPTY2D1Q68D10 685 aaPredicted RBP15.22■□□□□ 0.03
SSSCA1-203ENST00000526877 OPTNQ96CV9 577 aa15.22■□□□□ 0.03
SSSCA1-203ENST00000526877 IDI2Q9BXS1 227 aa15.22■□□□□ 0.03
SSSCA1-203ENST00000526877 PIH1D3Q9NQM4 214 aaKnown RBP15.22■□□□□ 0.03
SSSCA1-203ENST00000526877 RAD50Q92878 1312 aa15.21■□□□□ 0.03
SSSCA1-203ENST00000526877 SGSM2O43147 1006 aa15.21■□□□□ 0.03
SSSCA1-203ENST00000526877 IDH1O75874 414 aaKnown RBP15.21■□□□□ 0.03
SSSCA1-203ENST00000526877 MECOMQ03112 1051 aa15.21■□□□□ 0.03
SSSCA1-203ENST00000526877 TCP10Q12799 353 aa15.21■□□□□ 0.03
SSSCA1-203ENST00000526877 KIAA1211Q6ZU35 1233 aa15.21■□□□□ 0.03
SSSCA1-203ENST00000526877 MIGA2Q7L4E1 593 aa15.21■□□□□ 0.03
SSSCA1-203ENST00000526877 ZKSCAN4Q969J2 545 aaPredicted RBP15.21■□□□□ 0.03
SSSCA1-203ENST00000526877 HOOK2Q96ED9 719 aa15.21■□□□□ 0.03
SSSCA1-203ENST00000526877 HELLSQ9NRZ9 838 aa15.21■□□□□ 0.03
SSSCA1-203ENST00000526877 LRP2BPQ9P2M1 347 aa15.21■□□□□ 0.03
SSSCA1-203ENST00000526877 ZNF112Q9UJU3 913 aa15.21■□□□□ 0.03
SSSCA1-203ENST00000526877 SNCAIPQ9Y6H5 919 aa15.21■□□□□ 0.03
SSSCA1-203ENST00000526877 GPR75-ASB3A0A0A6YYF3 556 aa15.2■□□□□ 0.02
SSSCA1-203ENST00000526877 SPDYE5A6NIY4 337 aa15.2■□□□□ 0.02
SSSCA1-203ENST00000526877 ERICH6Q7L0X2 663 aa15.2■□□□□ 0.02
SSSCA1-203ENST00000526877 CTU1Q7Z7A3 348 aaKnown RBP15.2■□□□□ 0.02
SSSCA1-203ENST00000526877 DZIP1Q86YF9 867 aaKnown RBP15.2■□□□□ 0.02
SSSCA1-203ENST00000526877 FAM227BQ96M60 508 aa15.2■□□□□ 0.02
SSSCA1-203ENST00000526877 WRNIP1Q96S55 665 aa15.2■□□□□ 0.02
SSSCA1-203ENST00000526877 CCDC85CA6NKD9 419 aa15.19■□□□□ 0.02
SSSCA1-203ENST00000526877 IGSF3O75054 1194 aa15.19■□□□□ 0.02
SSSCA1-203ENST00000526877 ENTPD3O75355 529 aa15.19■□□□□ 0.02
SSSCA1-203ENST00000526877 WDHD1O75717 1129 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms