RNA–Protein interactions for RNA: ENST00000526829.1

VPS11-202, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 1,952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-202ENST00000526829 HPS5Q9UPZ3 1129 aa13.21□□□□□ -0.29
VPS11-202ENST00000526829 MTMR7Q9Y216 660 aa13.21□□□□□ -0.29
VPS11-202ENST00000526829 PDE4DIPQ5VU43 2346 aa13.21□□□□□ -0.29
VPS11-202ENST00000526829 MFAP1P55081 439 aaKnown RBP13.21□□□□□ -0.29
VPS11-202ENST00000526829 SOX10P56693 466 aa13.21□□□□□ -0.29
VPS11-202ENST00000526829 UBE4AQ14139 1066 aa13.21□□□□□ -0.29
VPS11-202ENST00000526829 UTYO14607 1347 aa13.21□□□□□ -0.3
VPS11-202ENST00000526829 AOX1Q06278 1338 aa13.21□□□□□ -0.3
VPS11-202ENST00000526829 F8W031 263 aaPredicted RBP13.2□□□□□ -0.3
VPS11-202ENST00000526829 RBM5P52756 815 aaKnown RBP eCLIP13.2□□□□□ -0.3
VPS11-202ENST00000526829 FOXD4L6Q3SYB3 417 aaPredicted RBP13.2□□□□□ -0.3
VPS11-202ENST00000526829 FOXD4L3Q6VB84 417 aaPredicted RBP13.2□□□□□ -0.3
VPS11-202ENST00000526829 ANKRD23Q86SG2 305 aa13.2□□□□□ -0.3
VPS11-202ENST00000526829 TDRD7Q8NHU6 1098 aaKnown RBP13.2□□□□□ -0.3
VPS11-202ENST00000526829 TSPAN18Q96SJ8 248 aa13.2□□□□□ -0.3
VPS11-202ENST00000526829 FZD1Q9UP38 647 aa13.2□□□□□ -0.3
VPS11-202ENST00000526829 CLRN2A0PK11 232 aa13.2□□□□□ -0.3
VPS11-202ENST00000526829 MANSC4A6NHS7 340 aaPredicted RBP13.2□□□□□ -0.3
VPS11-202ENST00000526829 PPP1R12BO60237 982 aaPredicted RBP13.2□□□□□ -0.3
VPS11-202ENST00000526829 ALDH1A1P00352 501 aa13.2□□□□□ -0.3
VPS11-202ENST00000526829 ZBTB48P10074 688 aaPredicted RBP13.2□□□□□ -0.3
VPS11-202ENST00000526829 MSNP26038 577 aaKnown RBP13.2□□□□□ -0.3
VPS11-202ENST00000526829 SUPT20HL1Q3ZLR7 823 aa13.2□□□□□ -0.3
VPS11-202ENST00000526829 SUCLG2Q96I99 432 aa13.2□□□□□ -0.3
VPS11-202ENST00000526829 R3HDMLQ9H3Y0 253 aa13.2□□□□□ -0.3
VPS11-202ENST00000526829 JAG2Q9Y219 1238 aa13.2□□□□□ -0.3
VPS11-202ENST00000526829 INHBEP58166 350 aa13.19□□□□□ -0.3
VPS11-202ENST00000526829 ZNF513Q8N8E2 541 aaPredicted RBP13.19□□□□□ -0.3
VPS11-202ENST00000526829 SLC10A4Q96EP9 437 aa13.19□□□□□ -0.3
VPS11-202ENST00000526829 WNK4Q96J92 1243 aa13.19□□□□□ -0.3
VPS11-202ENST00000526829 FAM84BQ96KN1 310 aaPredicted RBP13.19□□□□□ -0.3
VPS11-202ENST00000526829 CGNQ9P2M7 1197 aaKnown RBP13.19□□□□□ -0.3
VPS11-202ENST00000526829 RIPOR2Q9Y4F9 1068 aa13.19□□□□□ -0.3
VPS11-202ENST00000526829 FKTNO75072 461 aa13.18□□□□□ -0.3
VPS11-202ENST00000526829 RLBP1P12271 317 aa13.18□□□□□ -0.3
VPS11-202ENST00000526829 HIBADHP31937 336 aaKnown RBP13.18□□□□□ -0.3
VPS11-202ENST00000526829 NASPP49321 788 aaPredicted RBP13.18□□□□□ -0.3
VPS11-202ENST00000526829 MYBPC2Q14324 1141 aa13.18□□□□□ -0.3
VPS11-202ENST00000526829 RABL6Q3YEC7 729 aaPredicted RBP13.18□□□□□ -0.3
VPS11-202ENST00000526829 NBPF12Q5TAG4 269 aaPredicted RBP13.18□□□□□ -0.3
VPS11-202ENST00000526829 CLEC17AQ6ZS10 378 aa13.18□□□□□ -0.3
VPS11-202ENST00000526829 ARMCX6Q7L4S7 300 aa13.18□□□□□ -0.3
VPS11-202ENST00000526829 VPS37DQ86XT2 251 aa13.18□□□□□ -0.3
VPS11-202ENST00000526829 CLMNQ96JQ2 1002 aa13.18□□□□□ -0.3
VPS11-202ENST00000526829 MYCBPQ99417 103 aaPredicted RBP13.18□□□□□ -0.3
VPS11-202ENST00000526829 PUS3Q9BZE2 481 aaKnown RBP13.18□□□□□ -0.3
VPS11-202ENST00000526829 OTOFQ9HC10 1997 aa13.18□□□□□ -0.3
VPS11-202ENST00000526829 USP2O75604 605 aaPredicted RBP13.18□□□□□ -0.3
VPS11-202ENST00000526829 NBPF7P0C2Y1 421 aaPredicted RBP13.18□□□□□ -0.3
VPS11-202ENST00000526829 GYG1P46976 350 aa13.18□□□□□ -0.3
VPS11-202ENST00000526829 HDAC1Q13547 482 aaPredicted RBP13.18□□□□□ -0.3
VPS11-202ENST00000526829 RASA3Q14644 834 aa13.18□□□□□ -0.3
VPS11-202ENST00000526829 SPDYE2Q495Y8 402 aa13.18□□□□□ -0.3
VPS11-202ENST00000526829 MFSD14BQ5SR56 506 aa13.18□□□□□ -0.3
VPS11-202ENST00000526829 FBXO46Q6PJ61 603 aaPredicted RBP13.18□□□□□ -0.3
VPS11-202ENST00000526829 EP400NLQ6ZTU2 488 aa13.18□□□□□ -0.3
VPS11-202ENST00000526829 IFNL1Q8IU54 200 aa13.18□□□□□ -0.3
VPS11-202ENST00000526829 VEZTQ9HBM0 779 aa13.18□□□□□ -0.3
VPS11-202ENST00000526829 SERPINA10Q9UK55 444 aa13.18□□□□□ -0.3
VPS11-202ENST00000526829 MVPQ14764 893 aaKnown RBP13.17□□□□□ -0.3
VPS11-202ENST00000526829 MROH5Q6ZUA9 1318 aa13.17□□□□□ -0.3
VPS11-202ENST00000526829 IGF2BP3O00425 579 aaKnown RBP eCLIP13.16□□□□□ -0.3
VPS11-202ENST00000526829 CCDC172P0C7W6 258 aa13.16□□□□□ -0.3
VPS11-202ENST00000526829 IREB2P48200 963 aaKnown RBP13.16□□□□□ -0.3
VPS11-202ENST00000526829 TNFAIP1Q13829 316 aa13.16□□□□□ -0.3
VPS11-202ENST00000526829 FBXO33Q7Z6M2 555 aa13.16□□□□□ -0.3
VPS11-202ENST00000526829 MRPL50Q8N5N7 158 aaKnown RBP13.16□□□□□ -0.3
VPS11-202ENST00000526829 ZNF70Q9UC06 446 aaPredicted RBP13.16□□□□□ -0.3
VPS11-202ENST00000526829 TTF2Q9UNY4 1162 aaKnown RBP13.16□□□□□ -0.3
VPS11-202ENST00000526829 MRVI1Q9Y6F6 885 aa13.16□□□□□ -0.3
VPS11-202ENST00000526829 PTPRCP08575 1304 aa13.16□□□□□ -0.3
VPS11-202ENST00000526829 GJA5P36382 358 aa13.16□□□□□ -0.3
VPS11-202ENST00000526829 CAVIN4Q5BKX8 364 aa13.16□□□□□ -0.3
VPS11-202ENST00000526829 FOXD4L5Q5VV16 416 aaPredicted RBP13.16□□□□□ -0.3
VPS11-202ENST00000526829 ANKRD44Q8N8A2 993 aa13.16□□□□□ -0.3
VPS11-202ENST00000526829 FOXD4L4Q8WXT5 416 aaPredicted RBP13.16□□□□□ -0.3
VPS11-202ENST00000526829 BICC1Q9H694 974 aaKnown RBP13.16□□□□□ -0.3
VPS11-202ENST00000526829 TESPA1A2RU30 521 aaPredicted RBP13.15□□□□□ -0.3
VPS11-202ENST00000526829 GOLGA6L22H0YM25 854 aa13.15□□□□□ -0.3
VPS11-202ENST00000526829 METTL24Q5JXM2 366 aa13.15□□□□□ -0.3
VPS11-202ENST00000526829 DZIP1LQ8IYY4 767 aaKnown RBP13.15□□□□□ -0.3
VPS11-202ENST00000526829 ANKRD13AQ8IZ07 590 aa13.15□□□□□ -0.3
VPS11-202ENST00000526829 VGLL2Q8N8G2 317 aa13.15□□□□□ -0.3
VPS11-202ENST00000526829 TEPSINQ96N21 525 aa13.15□□□□□ -0.3
VPS11-202ENST00000526829 KLHL40Q2TBA0 621 aa13.14□□□□□ -0.31
VPS11-202ENST00000526829 CT47A1Q5JQC4 288 aaPredicted RBP13.14□□□□□ -0.31
VPS11-202ENST00000526829 BORCS6Q96GS4 357 aa13.14□□□□□ -0.31
VPS11-202ENST00000526829 TDRD3Q9H7E2 651 aaKnown RBP13.14□□□□□ -0.31
VPS11-202ENST00000526829 DYNC1I1O14576 645 aa13.14□□□□□ -0.31
VPS11-202ENST00000526829 CRKP46108 304 aa13.14□□□□□ -0.31
VPS11-202ENST00000526829 TNNI2P48788 182 aa13.14□□□□□ -0.31
VPS11-202ENST00000526829 ZNF445P59923 1031 aa13.14□□□□□ -0.31
VPS11-202ENST00000526829 HDLBPQ00341 1268 aaKnown RBP13.14□□□□□ -0.31
VPS11-202ENST00000526829 LRRC24Q50LG9 513 aa13.14□□□□□ -0.31
VPS11-202ENST00000526829 OTUD7BQ6GQQ9 843 aa13.14□□□□□ -0.31
VPS11-202ENST00000526829 PPP4R3CPQ6ZMV5 832 aa13.14□□□□□ -0.31
VPS11-202ENST00000526829 ITFG2Q969R8 447 aa13.14□□□□□ -0.31
VPS11-202ENST00000526829 NOL7Q9UMY1 257 aaKnown RBP13.14□□□□□ -0.31
VPS11-202ENST00000526829 GRIK5Q16478 980 aa13.13□□□□□ -0.31
VPS11-202ENST00000526829 CSPP1Q1MSJ5 1256 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms